RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 NLRP6P59044 892 aa16.25■□□□□ 0.19
PTPRN2-203ENST00000389418 NOL8Q76FK4 1167 aaKnown RBP16.25■□□□□ 0.19
PTPRN2-203ENST00000389418 GOLGA6L6A8MZA4 724 aa16.24■□□□□ 0.19
PTPRN2-203ENST00000389418 ATF3P18847 181 aa16.24■□□□□ 0.19
PTPRN2-203ENST00000389418 TRIM6-TRIM34B2RNG4 842 aa16.23■□□□□ 0.19
PTPRN2-203ENST00000389418 E9PSI1 815 aa16.23■□□□□ 0.19
PTPRN2-203ENST00000389418 SLKQ9H2G2 1235 aaPredicted RBP16.23■□□□□ 0.19
PTPRN2-203ENST00000389418 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
PTPRN2-203ENST00000389418 XPCQ01831 940 aaPredicted RBP16.23■□□□□ 0.19
PTPRN2-203ENST00000389418 TROQ12816 1431 aaPredicted RBP16.22■□□□□ 0.19
PTPRN2-203ENST00000389418 C1orf141Q5JVX7 400 aa16.22■□□□□ 0.19
PTPRN2-203ENST00000389418 PRAM1Q96QH2 718 aa16.22■□□□□ 0.19
PTPRN2-203ENST00000389418 COG6Q9Y2V7 657 aa16.22■□□□□ 0.19
PTPRN2-203ENST00000389418 HFM1A2PYH4 1435 aa16.22■□□□□ 0.19
PTPRN2-203ENST00000389418 WASHC2AQ641Q2 1341 aa16.22■□□□□ 0.19
PTPRN2-203ENST00000389418 PTMSP20962 102 aa16.22■□□□□ 0.19
PTPRN2-203ENST00000389418 ESCO1Q5FWF5 840 aa16.22■□□□□ 0.19
PTPRN2-203ENST00000389418 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
PTPRN2-203ENST00000389418 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.19
PTPRN2-203ENST00000389418 PROSER2Q86WR7 435 aaPredicted RBP16.21■□□□□ 0.19
PTPRN2-203ENST00000389418 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.18
PTPRN2-203ENST00000389418 MFAP1P55081 439 aaKnown RBP16.21■□□□□ 0.18
PTPRN2-203ENST00000389418 EXOC6Q8TAG9 804 aa16.2■□□□□ 0.18
PTPRN2-203ENST00000389418 RIPK4P57078 832 aa16.2■□□□□ 0.18
PTPRN2-203ENST00000389418 NBPF8Q3BBV2 869 aa16.2■□□□□ 0.18
PTPRN2-203ENST00000389418 CEBPAP49715 358 aaPredicted RBP16.19■□□□□ 0.18
PTPRN2-203ENST00000389418 EHBP1L1Q8N3D4 1523 aa16.19■□□□□ 0.18
PTPRN2-203ENST00000389418 FRAT2O75474 233 aaPredicted RBP16.19■□□□□ 0.18
PTPRN2-203ENST00000389418 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
PTPRN2-203ENST00000389418 RRP1P56182 461 aaKnown RBP16.18■□□□□ 0.18
PTPRN2-203ENST00000389418 RTN4Q9NQC3 1192 aaKnown RBP16.18■□□□□ 0.18
PTPRN2-203ENST00000389418 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
PTPRN2-203ENST00000389418 HECW1Q76N89 1606 aa16.17■□□□□ 0.18
PTPRN2-203ENST00000389418 MTHFSP49914 203 aa16.17■□□□□ 0.18
PTPRN2-203ENST00000389418 MEX3CQ5U5Q3 659 aaKnown RBP16.17■□□□□ 0.18
PTPRN2-203ENST00000389418 ABTB2Q8N961 1025 aa16.16■□□□□ 0.18
PTPRN2-203ENST00000389418 CDK13Q14004 1512 aaKnown RBP16.16■□□□□ 0.18
PTPRN2-203ENST00000389418 STRN4Q9NRL3 753 aa16.16■□□□□ 0.18
PTPRN2-203ENST00000389418 EPRSP07814 1512 aaKnown RBP16.15■□□□□ 0.18
PTPRN2-203ENST00000389418 CRBNQ96SW2 442 aa16.15■□□□□ 0.18
PTPRN2-203ENST00000389418 TIAM1Q13009 1591 aa16.14■□□□□ 0.17
PTPRN2-203ENST00000389418 ZKSCAN2Q63HK3 967 aa16.14■□□□□ 0.17
PTPRN2-203ENST00000389418 GBP4Q96PP9 640 aa16.14■□□□□ 0.17
PTPRN2-203ENST00000389418 CNTLNQ9NXG0 1405 aa16.14■□□□□ 0.17
PTPRN2-203ENST00000389418 TTC5Q8N0Z6 440 aa16.14■□□□□ 0.17
PTPRN2-203ENST00000389418 SLC52A1Q9NWF4 448 aa16.14■□□□□ 0.17
PTPRN2-203ENST00000389418 NUTM2BA6NNL0 878 aaPredicted RBP16.14■□□□□ 0.17
PTPRN2-203ENST00000389418 NUTM2EB1AL46 878 aaPredicted RBP16.14■□□□□ 0.17
PTPRN2-203ENST00000389418 NUTM2AQ8IVF1 878 aaPredicted RBP16.14■□□□□ 0.17
PTPRN2-203ENST00000389418 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
PTPRN2-203ENST00000389418 PLB1Q6P1J6 1458 aa16.13■□□□□ 0.17
PTPRN2-203ENST00000389418 GNL2Q13823 731 aaKnown RBP16.13■□□□□ 0.17
PTPRN2-203ENST00000389418 KLHL34Q8N239 644 aa16.13■□□□□ 0.17
PTPRN2-203ENST00000389418 IPO9Q96P70 1041 aaKnown RBP16.13■□□□□ 0.17
PTPRN2-203ENST00000389418 TOMM22Q9NS69 142 aa16.13■□□□□ 0.17
PTPRN2-203ENST00000389418 DNTTIP2Q5QJE6 756 aaKnown RBP16.13■□□□□ 0.17
PTPRN2-203ENST00000389418 DEKP35659 375 aaKnown RBP16.13■□□□□ 0.17
PTPRN2-203ENST00000389418 CABP1Q9NZU7 370 aa16.13■□□□□ 0.17
PTPRN2-203ENST00000389418 C9orf84Q5VXU9 1444 aa16.12■□□□□ 0.17
PTPRN2-203ENST00000389418 G3V3G9 751 aa16.12■□□□□ 0.17
PTPRN2-203ENST00000389418 DCAF8Q5TAQ9 597 aa16.12■□□□□ 0.17
PTPRN2-203ENST00000389418 PIP4K2BP78356 416 aa16.11■□□□□ 0.17
PTPRN2-203ENST00000389418 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
PTPRN2-203ENST00000389418 FAM177BA6PVY3 158 aa16.11■□□□□ 0.17
PTPRN2-203ENST00000389418 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
PTPRN2-203ENST00000389418 FBXO31Q5XUX0 539 aaPredicted RBP16.11■□□□□ 0.17
PTPRN2-203ENST00000389418 CHMP4CQ96CF2 233 aa16.11■□□□□ 0.17
PTPRN2-203ENST00000389418 ADAMTS8Q9UP79 889 aa16.11■□□□□ 0.17
PTPRN2-203ENST00000389418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.11■□□□□ 0.179e-7■■■■■ 147.6
PTPRN2-203ENST00000389418 ANKRD45Q5TZF3 282 aa16.1■□□□□ 0.17
PTPRN2-203ENST00000389418 FKBP5Q13451 457 aaPredicted RBP16.1■□□□□ 0.17
PTPRN2-203ENST00000389418 CENPQQ7L2Z9 268 aaPredicted RBP16.1■□□□□ 0.17
PTPRN2-203ENST00000389418 GZF1Q9H116 711 aaPredicted RBP16.1■□□□□ 0.17
PTPRN2-203ENST00000389418 L1TD1Q5T7N2 865 aaKnown RBP16.1■□□□□ 0.17
PTPRN2-203ENST00000389418 CCDC34Q96HJ3 373 aa16.1■□□□□ 0.17
PTPRN2-203ENST00000389418 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
PTPRN2-203ENST00000389418 API5Q9BZZ5 524 aaKnown RBP16.1■□□□□ 0.17
PTPRN2-203ENST00000389418 FOXD4L5Q5VV16 416 aaPredicted RBP16.09■□□□□ 0.17
PTPRN2-203ENST00000389418 FOXD4L4Q8WXT5 416 aaPredicted RBP16.09■□□□□ 0.17
PTPRN2-203ENST00000389418 RILPL2Q969X0 211 aa16.09■□□□□ 0.17
PTPRN2-203ENST00000389418 CDCA7LQ96GN5 454 aa16.09■□□□□ 0.17
PTPRN2-203ENST00000389418 RUNDC1Q96C34 613 aa16.09■□□□□ 0.17
PTPRN2-203ENST00000389418 THEMISQ8N1K5 641 aaPredicted RBP16.08■□□□□ 0.17
PTPRN2-203ENST00000389418 ARHGEF11O15085 1522 aa16.08■□□□□ 0.16
PTPRN2-203ENST00000389418 PDE4AP27815 886 aa16.08■□□□□ 0.16
PTPRN2-203ENST00000389418 LRRFIP1Q32MZ4 808 aaKnown RBP16.08■□□□□ 0.16
PTPRN2-203ENST00000389418 C9orf78Q9NZ63 289 aaPredicted RBP16.08■□□□□ 0.16
PTPRN2-203ENST00000389418 KIF3AQ9Y496 699 aa16.08■□□□□ 0.16
PTPRN2-203ENST00000389418 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
PTPRN2-203ENST00000389418 AAMPQ13685 434 aa16.07■□□□□ 0.16
PTPRN2-203ENST00000389418 WAPLQ7Z5K2 1190 aa16.07■□□□□ 0.16
PTPRN2-203ENST00000389418 TSPYL4Q9UJ04 414 aa16.07■□□□□ 0.16
PTPRN2-203ENST00000389418 DDX58O95786 925 aaKnown RBP16.07■□□□□ 0.16
PTPRN2-203ENST00000389418 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
PTPRN2-203ENST00000389418 KIAA1107Q9UPP5 1409 aa16.07■□□□□ 0.16
PTPRN2-203ENST00000389418 RPGRIP1LQ68CZ1 1315 aa16.07■□□□□ 0.16
PTPRN2-203ENST00000389418 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
PTPRN2-203ENST00000389418 GNAI1P63096 354 aa16.06■□□□□ 0.16
PTPRN2-203ENST00000389418 FOXD4L6Q3SYB3 417 aaPredicted RBP16.06■□□□□ 0.16
PTPRN2-203ENST00000389418 FOXD4L3Q6VB84 417 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms