RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 MAP3K7O43318 606 aa5.15□□□□□ -1.59
MIR548A3-201ENST00000385297 HDGFP51858 240 aaKnown RBP5.15□□□□□ -1.59
MIR548A3-201ENST00000385297 LMOD2Q6P5Q4 547 aa5.15□□□□□ -1.59
MIR548A3-201ENST00000385297 C11orf95C9JLR9 678 aaPredicted RBP5.14□□□□□ -1.59
MIR548A3-201ENST00000385297 RNF40O75150 1001 aa5.14□□□□□ -1.59
MIR548A3-201ENST00000385297 NBR1Q14596 966 aa5.14□□□□□ -1.59
MIR548A3-201ENST00000385297 SMCPP49901 116 aaPredicted RBP5.13□□□□□ -1.59
MIR548A3-201ENST00000385297 SUZ12Q15022 739 aaKnown RBP5.13□□□□□ -1.59
MIR548A3-201ENST00000385297 SLF2Q8IX21 1173 aa5.13□□□□□ -1.59
MIR548A3-201ENST00000385297 PKD2L1Q9P0L9 805 aa5.13□□□□□ -1.59
MIR548A3-201ENST00000385297 TERTO14746 1132 aaKnown RBP5.12□□□□□ -1.59
MIR548A3-201ENST00000385297 PPEF1O14829 653 aaPredicted RBP5.12□□□□□ -1.59
MIR548A3-201ENST00000385297 GTPBP6O43824 516 aaPredicted RBP5.12□□□□□ -1.59
MIR548A3-201ENST00000385297 CTC1Q2NKJ3 1217 aa5.12□□□□□ -1.59
MIR548A3-201ENST00000385297 SWT1Q5T5J6 900 aaKnown RBP5.12□□□□□ -1.59
MIR548A3-201ENST00000385297 BLOC1S3Q6QNY0 202 aa5.12□□□□□ -1.59
MIR548A3-201ENST00000385297 NUDT18Q6ZVK8 323 aa5.12□□□□□ -1.59
MIR548A3-201ENST00000385297 PRR14Q9BWN1 585 aa5.12□□□□□ -1.59
MIR548A3-201ENST00000385297 RBM27Q9P2N5 1060 aaKnown RBP5.12□□□□□ -1.59
MIR548A3-201ENST00000385297 PCDHB3Q9Y5E6 796 aa5.12□□□□□ -1.59
MIR548A3-201ENST00000385297 FAM181BA6NEQ2 426 aa5.11□□□□□ -1.59
MIR548A3-201ENST00000385297 AXIN1O15169 862 aa5.11□□□□□ -1.59
MIR548A3-201ENST00000385297 TLL1O43897 1013 aa5.11□□□□□ -1.59
MIR548A3-201ENST00000385297 S1PR4O95977 384 aa5.11□□□□□ -1.59
MIR548A3-201ENST00000385297 LORP23490 312 aaPredicted RBP5.11□□□□□ -1.59
MIR548A3-201ENST00000385297 PRIM1P49642 420 aaKnown RBP5.1□□□□□ -1.59
MIR548A3-201ENST00000385297 PLA2G2CQ5R387 149 aa5.1□□□□□ -1.59
MIR548A3-201ENST00000385297 TTC13Q8NBP0 860 aa5.1□□□□□ -1.59
MIR548A3-201ENST00000385297 TOR4AQ9NXH8 423 aa5.1□□□□□ -1.59
MIR548A3-201ENST00000385297 PDIA6Q15084 440 aa5.09□□□□□ -1.59
MIR548A3-201ENST00000385297 CADPS2Q86UW7 1296 aa5.08□□□□□ -1.6
MIR548A3-201ENST00000385297 ADH1BP00325 375 aa5.06□□□□□ -1.6
MIR548A3-201ENST00000385297 SNRPBP14678 240 aaKnown RBP5.06□□□□□ -1.6
MIR548A3-201ENST00000385297 FOXC1Q12948 553 aa5.06□□□□□ -1.6
MIR548A3-201ENST00000385297 SPDYE16A6NNV3 312 aaPredicted RBP5.05□□□□□ -1.6
MIR548A3-201ENST00000385297 SLC4A3P48751 1232 aa5.05□□□□□ -1.6
MIR548A3-201ENST00000385297 TRIM47Q96LD4 638 aa5.05□□□□□ -1.6
MIR548A3-201ENST00000385297 EYA1Q99502 592 aa5.05□□□□□ -1.6
MIR548A3-201ENST00000385297 ACTN4O43707 911 aaKnown RBP5.04□□□□□ -1.6
MIR548A3-201ENST00000385297 RPIAP49247 311 aa5.04□□□□□ -1.6
MIR548A3-201ENST00000385297 ZSCAN1Q8NBB4 408 aa5.04□□□□□ -1.6
MIR548A3-201ENST00000385297 CDHR5Q9HBB8 845 aa5.04□□□□□ -1.6
MIR548A3-201ENST00000385297 ATP13A2Q9NQ11 1180 aa5.04□□□□□ -1.6
MIR548A3-201ENST00000385297 CYP4X1Q8N118 509 aa5.03□□□□□ -1.6
MIR548A3-201ENST00000385297 SLC6A16Q9GZN6 736 aa5.03□□□□□ -1.6
MIR548A3-201ENST00000385297 SENP2Q9HC62 589 aa5.03□□□□□ -1.6
MIR548A3-201ENST00000385297 GMPRP36959 345 aa5.01□□□□□ -1.61
MIR548A3-201ENST00000385297 PADI6Q6TGC4 694 aa5.01□□□□□ -1.61
MIR548A3-201ENST00000385297 NPDC1Q9NQX5 325 aaPredicted RBP5.01□□□□□ -1.61
MIR548A3-201ENST00000385297 OSBPP22059 807 aa5□□□□□ -1.61
MIR548A3-201ENST00000385297 NR1I2O75469 434 aa4.99□□□□□ -1.61
MIR548A3-201ENST00000385297 CD2BP2O95400 341 aaKnown RBP4.99□□□□□ -1.61
MIR548A3-201ENST00000385297 SMPD1P17405 629 aa4.99□□□□□ -1.61
MIR548A3-201ENST00000385297 KMT5BQ4FZB7 885 aa4.99□□□□□ -1.61
MIR548A3-201ENST00000385297 SLC16A10Q8TF71 515 aa4.99□□□□□ -1.61
MIR548A3-201ENST00000385297 KIFC2Q96AC6 838 aa4.99□□□□□ -1.61
MIR548A3-201ENST00000385297 NPAS3Q8IXF0 933 aa4.98□□□□□ -1.61
MIR548A3-201ENST00000385297 GSK3AP49840 483 aa4.97□□□□□ -1.61
MIR548A3-201ENST00000385297 NXF1Q9UBU9 619 aaKnown RBP4.97□□□□□ -1.61
MIR548A3-201ENST00000385297 ARIH1Q9Y4X5 557 aaPredicted RBP4.97□□□□□ -1.61
MIR548A3-201ENST00000385297 TTC24A2A3L6 582 aaPredicted RBP4.96□□□□□ -1.62
MIR548A3-201ENST00000385297 GRXCR2A6NFK2 248 aa4.96□□□□□ -1.62
MIR548A3-201ENST00000385297 CFHP08603 1231 aa4.96□□□□□ -1.62
MIR548A3-201ENST00000385297 DNAJB2P25686 324 aa4.96□□□□□ -1.62
MIR548A3-201ENST00000385297 KCNMA1Q12791 1236 aa4.96□□□□□ -1.62
MIR548A3-201ENST00000385297 SCUBE3Q8IX30 993 aa4.96□□□□□ -1.62
MIR548A3-201ENST00000385297 IRF7Q92985 503 aa4.96□□□□□ -1.62
MIR548A3-201ENST00000385297 TMEM134Q9H6X4 195 aa4.96□□□□□ -1.62
MIR548A3-201ENST00000385297 SNIP1Q8TAD8 396 aaKnown RBP4.95□□□□□ -1.62
MIR548A3-201ENST00000385297 SPSB2Q99619 263 aa4.95□□□□□ -1.62
MIR548A3-201ENST00000385297 H3BM21 787 aa4.94□□□□□ -1.62
MIR548A3-201ENST00000385297 WNT7AO00755 349 aa4.94□□□□□ -1.62
MIR548A3-201ENST00000385297 KCTD17Q8N5Z5 321 aa4.94□□□□□ -1.62
MIR548A3-201ENST00000385297 SLC10A3P09131 477 aa4.93□□□□□ -1.62
MIR548A3-201ENST00000385297 FCF1Q9Y324 198 aaKnown RBP4.93□□□□□ -1.62
MIR548A3-201ENST00000385297 ERBB4Q15303 1308 aa4.92□□□□□ -1.62
MIR548A3-201ENST00000385297 J3QL48 77 aa4.91□□□□□ -1.62
MIR548A3-201ENST00000385297 RBM46Q8TBY0 533 aaKnown RBP4.9□□□□□ -1.63
MIR548A3-201ENST00000385297 HPS1Q92902 700 aa4.9□□□□□ -1.63
MIR548A3-201ENST00000385297 THAP11Q96EK4 314 aa4.9□□□□□ -1.63
MIR548A3-201ENST00000385297 RCCD1A6NED2 376 aa4.89□□□□□ -1.63
MIR548A3-201ENST00000385297 FAM160A2Q8N612 972 aaPredicted RBP4.89□□□□□ -1.63
MIR548A3-201ENST00000385297 ADGRG1Q9Y653 693 aa4.89□□□□□ -1.63
MIR548A3-201ENST00000385297 PUS10Q3MIT2 529 aaKnown RBP4.88□□□□□ -1.63
MIR548A3-201ENST00000385297 MRGPRX2Q96LB1 330 aa4.88□□□□□ -1.63
MIR548A3-201ENST00000385297 VSIG8P0DPA2 414 aa4.87□□□□□ -1.63
MIR548A3-201ENST00000385297 VEGFBP49765 207 aa4.87□□□□□ -1.63
MIR548A3-201ENST00000385297 XP32Q5T750 250 aa4.87□□□□□ -1.63
MIR548A3-201ENST00000385297 TMEM151AQ8N4L1 468 aa4.87□□□□□ -1.63
MIR548A3-201ENST00000385297 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
MIR548A3-201ENST00000385297 ZBTB24O43167 697 aaPredicted RBP4.86□□□□□ -1.63
MIR548A3-201ENST00000385297 TRIM32Q13049 653 aa4.86□□□□□ -1.63
MIR548A3-201ENST00000385297 E2F4Q16254 413 aa4.86□□□□□ -1.63
MIR548A3-201ENST00000385297 MORN1Q5T089 497 aa4.86□□□□□ -1.63
MIR548A3-201ENST00000385297 RASSF7Q02833 373 aa4.85□□□□□ -1.63
MIR548A3-201ENST00000385297 TRIM46Q7Z4K8 759 aa4.85□□□□□ -1.63
MIR548A3-201ENST00000385297 REPIN1Q9BWE0 567 aaKnown RBP4.85□□□□□ -1.63
MIR548A3-201ENST00000385297 SALL2Q9Y467 1007 aaPredicted RBP4.85□□□□□ -1.63
MIR548A3-201ENST00000385297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.84□□□□□ -1.63
MIR548A3-201ENST00000385297 GDF11O95390 407 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms