RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 LRRC59Q96AG4 307 aaKnown RBP2.46□□□□□ -2.02
RNU6-42P-201ENST00000384165 RNF17Q9BXT8 1623 aaKnown RBP2.46□□□□□ -2.02
RNU6-42P-201ENST00000384165 FLNBO75369 2602 aaKnown RBP2.45□□□□□ -2.02
RNU6-42P-201ENST00000384165 PROSER2Q86WR7 435 aaPredicted RBP2.45□□□□□ -2.02
RNU6-42P-201ENST00000384165 CDCA7Q9BWT1 371 aaPredicted RBP2.45□□□□□ -2.02
RNU6-42P-201ENST00000384165 NMRK2Q9NPI5 230 aa2.45□□□□□ -2.02
RNU6-42P-201ENST00000384165 STXBP5LQ9Y2K9 1186 aa2.45□□□□□ -2.02
RNU6-42P-201ENST00000384165 ARHGEF40Q8TER5 1519 aa2.45□□□□□ -2.02
RNU6-42P-201ENST00000384165 DCAF1Q9Y4B6 1507 aa2.45□□□□□ -2.02
RNU6-42P-201ENST00000384165 SZT2Q5T011 3432 aa2.45□□□□□ -2.02
RNU6-42P-201ENST00000384165 MAST4O15021 2626 aa2.45□□□□□ -2.02
RNU6-42P-201ENST00000384165 PHLPP1O60346 1717 aa2.45□□□□□ -2.02
RNU6-42P-201ENST00000384165 GOLGB1Q14789 3259 aaKnown RBP2.44□□□□□ -2.02
RNU6-42P-201ENST00000384165 YBX3P16989 372 aaKnown RBP eCLIP2.44□□□□□ -2.02
RNU6-42P-201ENST00000384165 THEMISQ8N1K5 641 aaPredicted RBP2.44□□□□□ -2.02
RNU6-42P-201ENST00000384165 MYT1LQ9UL68 1186 aa2.44□□□□□ -2.02
RNU6-42P-201ENST00000384165 PARD3Q8TEW0 1356 aa2.44□□□□□ -2.02
RNU6-42P-201ENST00000384165 CFTRP13569 1480 aa2.44□□□□□ -2.02
RNU6-42P-201ENST00000384165 UNC80Q8N2C7 3258 aa2.44□□□□□ -2.02
RNU6-42P-201ENST00000384165 TARBP1Q13395 1621 aaKnown RBP2.43□□□□□ -2.02
RNU6-42P-201ENST00000384165 TRIM37O94972 964 aa2.43□□□□□ -2.02
RNU6-42P-201ENST00000384165 C1QTNF1Q9BXJ1 281 aa2.43□□□□□ -2.02
RNU6-42P-201ENST00000384165 MTFR1LQ9H019 292 aa2.43□□□□□ -2.02
RNU6-42P-201ENST00000384165 RAD54L2Q9Y4B4 1467 aa2.43□□□□□ -2.02
RNU6-42P-201ENST00000384165 MROH2BQ7Z745 1585 aa2.43□□□□□ -2.02
RNU6-42P-201ENST00000384165 ROBO1Q9Y6N7 1651 aa2.43□□□□□ -2.02
RNU6-42P-201ENST00000384165 NUP160Q12769 1436 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 SHROOM2Q13796 1616 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 GPR179Q6PRD1 2367 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 UNC13BO14795 1591 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 ARHGAP23Q9P227 1491 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 ADCY9O60503 1353 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 MAP3K5Q99683 1374 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 ITGB8P26012 769 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 VEGFBP49765 207 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 CREBZFQ9NS37 354 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 CCDC9Q9Y3X0 531 aaKnown RBP2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 NAV2Q8IVL1 2488 aa2.42□□□□□ -2.02
RNU6-42P-201ENST00000384165 CHD6Q8TD26 2715 aa2.41□□□□□ -2.02
RNU6-42P-201ENST00000384165 FASNP49327 2511 aaKnown RBP2.41□□□□□ -2.02
RNU6-42P-201ENST00000384165 LRRC9Q6ZRR7 1453 aa2.41□□□□□ -2.02
RNU6-42P-201ENST00000384165 ST18O60284 1047 aa2.41□□□□□ -2.02
RNU6-42P-201ENST00000384165 ERMP1Q7Z2K6 904 aa2.41□□□□□ -2.02
RNU6-42P-201ENST00000384165 PDGFDQ9GZP0 370 aaPredicted RBP2.41□□□□□ -2.02
RNU6-42P-201ENST00000384165 RRAGCQ9HB90 399 aa2.41□□□□□ -2.02
RNU6-42P-201ENST00000384165 ARHGEF12Q9NZN5 1544 aa2.41□□□□□ -2.02
RNU6-42P-201ENST00000384165 LAMA2P24043 3122 aaKnown RBP2.4□□□□□ -2.02
RNU6-42P-201ENST00000384165 MSH6P52701 1360 aa2.4□□□□□ -2.02
RNU6-42P-201ENST00000384165 ONECUT3O60422 494 aaPredicted RBP2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 POLD1P28340 1107 aa2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 RANGAP1P46060 587 aaPredicted RBP2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 DEFB123Q8N688 67 aa2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 BCL11BQ9C0K0 894 aaPredicted RBP2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 VCANP13611 3396 aa2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 NPHP4O75161 1426 aaPredicted RBP2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 NPATQ14207 1427 aa2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 NRKQ7Z2Y5 1582 aa2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 KDM2BQ8NHM5 1336 aa2.4□□□□□ -2.03
RNU6-42P-201ENST00000384165 TMEM94Q12767 1356 aa2.39□□□□□ -2.03
RNU6-42P-201ENST00000384165 ADAMTS7Q9UKP4 1686 aa2.39□□□□□ -2.03
RNU6-42P-201ENST00000384165 FAM182BQ5T319 152 aa2.39□□□□□ -2.03
RNU6-42P-201ENST00000384165 C14orf37Q86TY3 774 aa2.39□□□□□ -2.03
RNU6-42P-201ENST00000384165 UNC5CLQ8IV45 518 aa2.39□□□□□ -2.03
RNU6-42P-201ENST00000384165 DIP2AQ14689 1571 aa2.39□□□□□ -2.03
RNU6-42P-201ENST00000384165 TRIOBPQ9H2D6 2365 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 CNTNAP1P78357 1384 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 ZMYM3Q14202 1370 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 KDM5DQ9BY66 1539 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 DISP2A7MBM2 1401 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 ZIC2O95409 532 aaPredicted RBP2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 CHGAP10645 457 aaKnown RBP2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 ATF3P18847 181 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 FAM117BQ6P1L5 589 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 CHRDL2Q6WN34 429 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 FAM196AQ6ZSG2 479 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 TMEFF1Q8IYR6 380 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 NLGN2Q8NFZ4 835 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 PMFBP1Q8TBY8 1022 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 SPATA18Q8TC71 538 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 OTUD5Q96G74 571 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 SGIP1Q9BQI5 828 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 SH2B1Q9NRF2 756 aaPredicted RBP2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 MTMR10Q9NXD2 777 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 STK32BQ9NY57 414 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 ZNF462Q96JM2 2506 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 WDR97A6NE52 1622 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 ATP10AO60312 1499 aa2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 DENND4BO75064 1496 aaPredicted RBP2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 POLA1P09884 1462 aaPredicted RBP2.38□□□□□ -2.03
RNU6-42P-201ENST00000384165 PTPRUQ92729 1446 aa2.37□□□□□ -2.03
RNU6-42P-201ENST00000384165 UACAQ9BZF9 1416 aa2.37□□□□□ -2.03
RNU6-42P-201ENST00000384165 CA12O43570 354 aa2.37□□□□□ -2.03
RNU6-42P-201ENST00000384165 DEFB115Q30KQ5 88 aa2.37□□□□□ -2.03
RNU6-42P-201ENST00000384165 HNRNPABQ99729 332 aaKnown RBP2.37□□□□□ -2.03
RNU6-42P-201ENST00000384165 RBM27Q9P2N5 1060 aaKnown RBP2.37□□□□□ -2.03
RNU6-42P-201ENST00000384165 TSKSQ9UJT2 592 aa2.37□□□□□ -2.03
RNU6-42P-201ENST00000384165 PTPN13Q12923 2485 aa2.37□□□□□ -2.03
RNU6-42P-201ENST00000384165 A2MP01023 1474 aa2.37□□□□□ -2.03
RNU6-42P-201ENST00000384165 TNIKQ9UKE5 1360 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms