RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 GDF9O60383 454 aa6.89□□□□□ -1.31
RNU6-48P-201ENST00000384161 PKDCCQ504Y2 493 aa6.89□□□□□ -1.31
RNU6-48P-201ENST00000384161 SPDYE16A6NNV3 312 aaPredicted RBP6.87□□□□□ -1.31
RNU6-48P-201ENST00000384161 SWT1Q5T5J6 900 aaKnown RBP6.87□□□□□ -1.31
RNU6-48P-201ENST00000384161 LIAT1Q6ZQX7 453 aa6.87□□□□□ -1.31
RNU6-48P-201ENST00000384161 AAASQ9NRG9 546 aa6.87□□□□□ -1.31
RNU6-48P-201ENST00000384161 NECTIN2Q92692 538 aa6.86□□□□□ -1.31
RNU6-48P-201ENST00000384161 CDHR5Q9HBB8 845 aa6.86□□□□□ -1.31
RNU6-48P-201ENST00000384161 RNF40O75150 1001 aa6.85□□□□□ -1.31
RNU6-48P-201ENST00000384161 OSBPP22059 807 aa6.85□□□□□ -1.31
RNU6-48P-201ENST00000384161 HDGFP51858 240 aaKnown RBP6.85□□□□□ -1.31
RNU6-48P-201ENST00000384161 SLF2Q8IX21 1173 aa6.85□□□□□ -1.31
RNU6-48P-201ENST00000384161 ANKLE1Q8NAG6 615 aa6.85□□□□□ -1.31
RNU6-48P-201ENST00000384161 NPDC1Q9NQX5 325 aaPredicted RBP6.85□□□□□ -1.31
RNU6-48P-201ENST00000384161 ARIH1Q9Y4X5 557 aaPredicted RBP6.84□□□□□ -1.31
RNU6-48P-201ENST00000384161 PPEF1O14829 653 aaPredicted RBP6.83□□□□□ -1.32
RNU6-48P-201ENST00000384161 ST8SIA5O15466 376 aa6.83□□□□□ -1.32
RNU6-48P-201ENST00000384161 ZNF697Q5TEC3 545 aa6.83□□□□□ -1.32
RNU6-48P-201ENST00000384161 BLOC1S3Q6QNY0 202 aa6.83□□□□□ -1.32
RNU6-48P-201ENST00000384161 EYA1Q99502 592 aa6.83□□□□□ -1.32
RNU6-48P-201ENST00000384161 FAM187AA6NFU0 413 aa6.82□□□□□ -1.32
RNU6-48P-201ENST00000384161 WDR70Q9NW82 654 aa6.82□□□□□ -1.32
RNU6-48P-201ENST00000384161 TLL1O43897 1013 aa6.81□□□□□ -1.32
RNU6-48P-201ENST00000384161 CRIPAKQ8N1N5 446 aa6.81□□□□□ -1.32
RNU6-48P-201ENST00000384161 KDM2AQ9Y2K7 1162 aa6.81□□□□□ -1.32
RNU6-48P-201ENST00000384161 PCDHB3Q9Y5E6 796 aa6.81□□□□□ -1.32
RNU6-48P-201ENST00000384161 GRXCR2A6NFK2 248 aa6.8□□□□□ -1.32
RNU6-48P-201ENST00000384161 TNFRSF10AO00220 468 aa6.8□□□□□ -1.32
RNU6-48P-201ENST00000384161 WIPF1O43516 503 aa6.8□□□□□ -1.32
RNU6-48P-201ENST00000384161 DACH1Q9UI36 760 aa6.8□□□□□ -1.32
RNU6-48P-201ENST00000384161 S1PR4O95977 384 aa6.79□□□□□ -1.32
RNU6-48P-201ENST00000384161 NFX1Q12986 1120 aaKnown RBP6.79□□□□□ -1.32
RNU6-48P-201ENST00000384161 PLA2G2CQ5R387 149 aa6.79□□□□□ -1.32
RNU6-48P-201ENST00000384161 PADI6Q6TGC4 694 aa6.79□□□□□ -1.32
RNU6-48P-201ENST00000384161 PKD2L1Q9P0L9 805 aa6.79□□□□□ -1.32
RNU6-48P-201ENST00000384161 WFS1O76024 890 aa6.78□□□□□ -1.32
RNU6-48P-201ENST00000384161 LCE2CQ5TA81 110 aa6.78□□□□□ -1.32
RNU6-48P-201ENST00000384161 PRR14Q9BWN1 585 aa6.78□□□□□ -1.32
RNU6-48P-201ENST00000384161 STK17AQ9UEE5 414 aa6.78□□□□□ -1.32
RNU6-48P-201ENST00000384161 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
RNU6-48P-201ENST00000384161 AVPP01185 164 aa6.77□□□□□ -1.33
RNU6-48P-201ENST00000384161 KRTAP4-6Q9BYQ5 205 aa6.77□□□□□ -1.33
RNU6-48P-201ENST00000384161 ACTN4O43707 911 aaKnown RBP6.76□□□□□ -1.33
RNU6-48P-201ENST00000384161 P3H3Q8IVL6 736 aa6.75□□□□□ -1.33
RNU6-48P-201ENST00000384161 LMOD2Q6P5Q4 547 aa6.74□□□□□ -1.33
RNU6-48P-201ENST00000384161 TOR4AQ9NXH8 423 aa6.74□□□□□ -1.33
RNU6-48P-201ENST00000384161 GMPR2Q9P2T1 348 aaKnown RBP6.74□□□□□ -1.33
RNU6-48P-201ENST00000384161 ADH1BP00325 375 aa6.73□□□□□ -1.33
RNU6-48P-201ENST00000384161 E2F4Q16254 413 aa6.73□□□□□ -1.33
RNU6-48P-201ENST00000384161 SMCPP49901 116 aaPredicted RBP6.72□□□□□ -1.33
RNU6-48P-201ENST00000384161 TMEM134Q9H6X4 195 aa6.71□□□□□ -1.34
RNU6-48P-201ENST00000384161 SLC4A3P48751 1232 aa6.7□□□□□ -1.34
RNU6-48P-201ENST00000384161 BCANQ96GW7 911 aa6.7□□□□□ -1.34
RNU6-48P-201ENST00000384161 C11orf95C9JLR9 678 aaPredicted RBP6.69□□□□□ -1.34
RNU6-48P-201ENST00000384161 SLC10A3P09131 477 aa6.69□□□□□ -1.34
RNU6-48P-201ENST00000384161 DNAJB2P25686 324 aa6.69□□□□□ -1.34
RNU6-48P-201ENST00000384161 INSM1Q01101 510 aaPredicted RBP6.69□□□□□ -1.34
RNU6-48P-201ENST00000384161 SLC6A16Q9GZN6 736 aa6.69□□□□□ -1.34
RNU6-48P-201ENST00000384161 CTC1Q2NKJ3 1217 aa6.68□□□□□ -1.34
RNU6-48P-201ENST00000384161 KMT5BQ4FZB7 885 aa6.68□□□□□ -1.34
RNU6-48P-201ENST00000384161 AXIN1O15169 862 aa6.67□□□□□ -1.34
RNU6-48P-201ENST00000384161 RPIAP49247 311 aa6.67□□□□□ -1.34
RNU6-48P-201ENST00000384161 FOXC1Q12948 553 aa6.67□□□□□ -1.34
RNU6-48P-201ENST00000384161 SCUBE3Q8IX30 993 aa6.67□□□□□ -1.34
RNU6-48P-201ENST00000384161 ARHGEF1Q92888 912 aaKnown RBP6.67□□□□□ -1.34
RNU6-48P-201ENST00000384161 CFHP08603 1231 aa6.66□□□□□ -1.34
RNU6-48P-201ENST00000384161 ADGRG1Q9Y653 693 aa6.66□□□□□ -1.34
RNU6-48P-201ENST00000384161 NR1I2O75469 434 aa6.65□□□□□ -1.34
RNU6-48P-201ENST00000384161 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.34
RNU6-48P-201ENST00000384161 RCCD1A6NED2 376 aa6.64□□□□□ -1.35
RNU6-48P-201ENST00000384161 TERTO14746 1132 aaKnown RBP6.64□□□□□ -1.35
RNU6-48P-201ENST00000384161 KCNV2Q8TDN2 545 aa6.64□□□□□ -1.35
RNU6-48P-201ENST00000384161 SNRPBP14678 240 aaKnown RBP6.63□□□□□ -1.35
RNU6-48P-201ENST00000384161 PTGDRQ13258 359 aa6.63□□□□□ -1.35
RNU6-48P-201ENST00000384161 RBM46Q8TBY0 533 aaKnown RBP6.62□□□□□ -1.35
RNU6-48P-201ENST00000384161 THAP11Q96EK4 314 aa6.62□□□□□ -1.35
RNU6-48P-201ENST00000384161 SPSB2Q99619 263 aa6.62□□□□□ -1.35
RNU6-48P-201ENST00000384161 CYP4X1Q8N118 509 aa6.61□□□□□ -1.35
RNU6-48P-201ENST00000384161 ATP13A2Q9NQ11 1180 aa6.61□□□□□ -1.35
RNU6-48P-201ENST00000384161 SMPD1P17405 629 aa6.6□□□□□ -1.35
RNU6-48P-201ENST00000384161 PUS10Q3MIT2 529 aaKnown RBP6.6□□□□□ -1.35
RNU6-48P-201ENST00000384161 TRIM47Q96LD4 638 aa6.6□□□□□ -1.35
RNU6-48P-201ENST00000384161 CD2BP2O95400 341 aaKnown RBP6.59□□□□□ -1.35
RNU6-48P-201ENST00000384161 FAM161AQ3B820 660 aa6.59□□□□□ -1.35
RNU6-48P-201ENST00000384161 FCF1Q9Y324 198 aaKnown RBP6.59□□□□□ -1.35
RNU6-48P-201ENST00000384161 FAM160A2Q8N612 972 aaPredicted RBP6.58□□□□□ -1.36
RNU6-48P-201ENST00000384161 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.57□□□□□ -1.36
RNU6-48P-201ENST00000384161 TULP1O00294 542 aaPredicted RBP6.57□□□□□ -1.36
RNU6-48P-201ENST00000384161 MLLT3P42568 568 aaPredicted RBP6.57□□□□□ -1.36
RNU6-48P-201ENST00000384161 MORN1Q5T089 497 aa6.56□□□□□ -1.36
RNU6-48P-201ENST00000384161 SMYD5Q6GMV2 418 aa6.56□□□□□ -1.36
RNU6-48P-201ENST00000384161 PXYLP1Q8TE99 480 aa6.55□□□□□ -1.36
RNU6-48P-201ENST00000384161 WNT7AO00755 349 aa6.54□□□□□ -1.36
RNU6-48P-201ENST00000384161 SNIP1Q8TAD8 396 aaKnown RBP6.54□□□□□ -1.36
RNU6-48P-201ENST00000384161 SENP2Q9HC62 589 aa6.54□□□□□ -1.36
RNU6-48P-201ENST00000384161 TTC24A2A3L6 582 aaPredicted RBP6.53□□□□□ -1.36
RNU6-48P-201ENST00000384161 J3QL48 77 aa6.53□□□□□ -1.36
RNU6-48P-201ENST00000384161 SALL2Q9Y467 1007 aaPredicted RBP6.53□□□□□ -1.36
RNU6-48P-201ENST00000384161 TESPA1A2RU30 521 aaPredicted RBP6.52□□□□□ -1.37
RNU6-48P-201ENST00000384161 PRDM9Q9NQV7 894 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms