RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ZNF521Q96K83 1311 aa23.8■■□□□ 1.4
SMARCD1-201ENST00000381513 INSRP06213 1382 aa23.79■■□□□ 1.4
SMARCD1-201ENST00000381513 KNSTRNQ9Y448 316 aa23.79■■□□□ 1.4
SMARCD1-201ENST00000381513 PZPP20742 1482 aa23.79■■□□□ 1.4
SMARCD1-201ENST00000381513 ABCC5O15440 1437 aa23.78■■□□□ 1.4
SMARCD1-201ENST00000381513 DYNC1I1O14576 645 aa23.78■■□□□ 1.4
SMARCD1-201ENST00000381513 PPP2R1AP30153 589 aa23.78■■□□□ 1.4
SMARCD1-201ENST00000381513 NBPF1Q3BBV0 1214 aa23.78■■□□□ 1.4
SMARCD1-201ENST00000381513 ZNF692Q9BU19 519 aaPredicted RBP23.78■■□□□ 1.4
SMARCD1-201ENST00000381513 E9PSI1 815 aa23.78■■□□□ 1.4
SMARCD1-201ENST00000381513 RWDD1Q9H446 243 aaPredicted RBP23.77■■□□□ 1.4
SMARCD1-201ENST00000381513 BCL2L13Q9BXK5 485 aa23.77■■□□□ 1.4
SMARCD1-201ENST00000381513 NKTRP30414 1462 aaKnown RBP23.77■■□□□ 1.4
SMARCD1-201ENST00000381513 DMTNQ08495 405 aa23.76■■□□□ 1.39
SMARCD1-201ENST00000381513 DNTTIP2Q5QJE6 756 aaKnown RBP23.75■■□□□ 1.39
SMARCD1-201ENST00000381513 PTMSP20962 102 aa23.74■■□□□ 1.39
SMARCD1-201ENST00000381513 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
SMARCD1-201ENST00000381513 UHRF1BP1Q6BDS2 1440 aa23.74■■□□□ 1.39
SMARCD1-201ENST00000381513 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
SMARCD1-201ENST00000381513 CBX1P83916 185 aa23.73■■□□□ 1.39
SMARCD1-201ENST00000381513 NEUROD2Q15784 382 aa23.73■■□□□ 1.39
SMARCD1-201ENST00000381513 CCDC94Q9BW85 323 aaPredicted RBP23.73■■□□□ 1.39
SMARCD1-201ENST00000381513 DMRT2Q9Y5R5 561 aa23.73■■□□□ 1.39
SMARCD1-201ENST00000381513 NOL7Q9UMY1 257 aaKnown RBP23.72■■□□□ 1.39
SMARCD1-201ENST00000381513 CSPP1Q1MSJ5 1256 aa23.72■■□□□ 1.39
SMARCD1-201ENST00000381513 TNNQ9UQP3 1299 aa23.72■■□□□ 1.39
SMARCD1-201ENST00000381513 LRRIQ1Q96JM4 1722 aa23.71■■□□□ 1.39
SMARCD1-201ENST00000381513 TMF1P82094 1093 aa23.71■■□□□ 1.39
SMARCD1-201ENST00000381513 NUP155O75694 1391 aa23.71■■□□□ 1.39
SMARCD1-201ENST00000381513 RAB3GAP1Q15042 981 aa23.71■■□□□ 1.39
SMARCD1-201ENST00000381513 PPP4R3BQ5MIZ7 849 aa23.7■■□□□ 1.38
SMARCD1-201ENST00000381513 UTP14CQ5TAP6 766 aaKnown RBP23.7■■□□□ 1.38
SMARCD1-201ENST00000381513 DISP3Q9P2K9 1392 aa23.7■■□□□ 1.38
SMARCD1-201ENST00000381513 ZSCAN20P17040 1043 aaPredicted RBP23.69■■□□□ 1.38
SMARCD1-201ENST00000381513 CAVIN1Q6NZI2 390 aaKnown RBP23.69■■□□□ 1.38
SMARCD1-201ENST00000381513 SASS6Q6UVJ0 657 aa23.69■■□□□ 1.38
SMARCD1-201ENST00000381513 TRMT2AQ8IZ69 625 aaKnown RBP23.69■■□□□ 1.38
SMARCD1-201ENST00000381513 AMER1Q5JTC6 1135 aaPredicted RBP23.69■■□□□ 1.38
SMARCD1-201ENST00000381513 ZNF500O60304 480 aaPredicted RBP23.69■■□□□ 1.38
SMARCD1-201ENST00000381513 SSFA2P28290 1259 aa23.69■■□□□ 1.38
SMARCD1-201ENST00000381513 GTF2E1P29083 439 aaPredicted RBP23.69■■□□□ 1.38
SMARCD1-201ENST00000381513 CHMP4BQ9H444 224 aaKnown RBP23.69■■□□□ 1.38
SMARCD1-201ENST00000381513 CIZ1Q9ULV3 898 aaPredicted RBP23.69■■□□□ 1.38
SMARCD1-201ENST00000381513 VIRMAQ69YN4 1812 aaKnown RBP23.68■■□□□ 1.38
SMARCD1-201ENST00000381513 RLBP1P12271 317 aa23.67■■□□□ 1.38
SMARCD1-201ENST00000381513 ZNF608Q9ULD9 1512 aaPredicted RBP23.67■■□□□ 1.38
SMARCD1-201ENST00000381513 NAP1L2Q9ULW6 460 aaPredicted RBP23.67■■□□□ 1.38
SMARCD1-201ENST00000381513 PTMAP06454 111 aaKnown RBP23.66■■□□□ 1.38
SMARCD1-201ENST00000381513 TSC1Q92574 1164 aa23.65■■□□□ 1.38
SMARCD1-201ENST00000381513 ZKSCAN5Q9Y2L8 839 aa23.65■■□□□ 1.38
SMARCD1-201ENST00000381513 SMC5Q8IY18 1101 aa23.65■■□□□ 1.38
SMARCD1-201ENST00000381513 PDIA4P13667 645 aaKnown RBP23.65■■□□□ 1.38
SMARCD1-201ENST00000381513 STAC3Q96MF2 364 aa23.65■■□□□ 1.38
SMARCD1-201ENST00000381513 HS1BP3Q53T59 392 aa23.64■■□□□ 1.38
SMARCD1-201ENST00000381513 KLHL40Q2TBA0 621 aa23.64■■□□□ 1.37
SMARCD1-201ENST00000381513 JARID2Q92833 1246 aaPredicted RBP23.64■■□□□ 1.37
SMARCD1-201ENST00000381513 CFDP1Q9UEE9 299 aaPredicted RBP23.64■■□□□ 1.37
SMARCD1-201ENST00000381513 CDK13Q14004 1512 aaKnown RBP23.63■■□□□ 1.37
SMARCD1-201ENST00000381513 MCTP1Q6DN14 999 aa23.63■■□□□ 1.37
SMARCD1-201ENST00000381513 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.62■■□□□ 1.37
SMARCD1-201ENST00000381513 DDIT3P35638 169 aa23.62■■□□□ 1.37
SMARCD1-201ENST00000381513 RBSNQ9H1K0 784 aa23.62■■□□□ 1.37
SMARCD1-201ENST00000381513 CAMSAP2Q08AD1 1489 aa23.61■■□□□ 1.37
SMARCD1-201ENST00000381513 E9PCH4 1651 aa23.61■■□□□ 1.37
SMARCD1-201ENST00000381513 TESK2Q96S53 571 aa23.6■■□□□ 1.37
SMARCD1-201ENST00000381513 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
SMARCD1-201ENST00000381513 FTSJ3Q8IY81 847 aaKnown RBP23.59■■□□□ 1.37
SMARCD1-201ENST00000381513 NINLQ9Y2I6 1382 aa23.59■■□□□ 1.37
SMARCD1-201ENST00000381513 KIAA0586Q9BVV6 1533 aa23.59■■□□□ 1.37
SMARCD1-201ENST00000381513 RRP7AQ9Y3A4 280 aaKnown RBP23.59■■□□□ 1.37
SMARCD1-201ENST00000381513 CTTNBP2Q8WZ74 1663 aa23.58■■□□□ 1.37
SMARCD1-201ENST00000381513 EPRSP07814 1512 aaKnown RBP23.58■■□□□ 1.37
SMARCD1-201ENST00000381513 ANKRD30AQ9BXX3 1397 aa23.58■■□□□ 1.37
SMARCD1-201ENST00000381513 IGSF3O75054 1194 aa23.58■■□□□ 1.37
SMARCD1-201ENST00000381513 BAG4O95429 457 aaKnown RBP23.58■■□□□ 1.37
SMARCD1-201ENST00000381513 VGLL3A8MV65 326 aa23.58■■□□□ 1.37
SMARCD1-201ENST00000381513 SNX21Q969T3 373 aa23.58■■□□□ 1.37
SMARCD1-201ENST00000381513 PRIM1P49642 420 aaKnown RBP23.57■■□□□ 1.36
SMARCD1-201ENST00000381513 ZSCAN23Q3MJ62 389 aa23.57■■□□□ 1.36
SMARCD1-201ENST00000381513 RTEL1-TNFRSF6BF6WH68 1400 aa23.57■■□□□ 1.36
SMARCD1-201ENST00000381513 FAM177BA6PVY3 158 aa23.57■■□□□ 1.36
SMARCD1-201ENST00000381513 RARSP54136 660 aaKnown RBP23.57■■□□□ 1.36
SMARCD1-201ENST00000381513 MPNDQ8N594 471 aa23.56■■□□□ 1.36
SMARCD1-201ENST00000381513 GTPBP4Q9BZE4 634 aaKnown RBP23.56■■□□□ 1.36
SMARCD1-201ENST00000381513 KIF20AO95235 890 aa23.56■■□□□ 1.36
SMARCD1-201ENST00000381513 RNF214Q8ND24 703 aa23.56■■□□□ 1.36
SMARCD1-201ENST00000381513 CCDC39Q9UFE4 941 aa23.55■■□□□ 1.36
SMARCD1-201ENST00000381513 SPDYE4A6NLX3 237 aa23.55■■□□□ 1.36
SMARCD1-201ENST00000381513 CD2BP2O95400 341 aaKnown RBP23.54■■□□□ 1.36
SMARCD1-201ENST00000381513 ERBINQ96RT1 1412 aa23.54■■□□□ 1.36
SMARCD1-201ENST00000381513 K7ELQ4 463 aaPredicted RBP23.54■■□□□ 1.36
SMARCD1-201ENST00000381513 ZMYM3Q14202 1370 aa23.53■■□□□ 1.36
SMARCD1-201ENST00000381513 CDK11BP21127 795 aaKnown RBP23.53■■□□□ 1.36
SMARCD1-201ENST00000381513 ZNF445P59923 1031 aa23.53■■□□□ 1.36
SMARCD1-201ENST00000381513 WWC1Q8IX03 1113 aa23.53■■□□□ 1.36
SMARCD1-201ENST00000381513 RBM42Q9BTD8 480 aaKnown RBP23.53■■□□□ 1.36
SMARCD1-201ENST00000381513 RBM27Q9P2N5 1060 aaKnown RBP23.52■■□□□ 1.36
SMARCD1-201ENST00000381513 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
SMARCD1-201ENST00000381513 ANKRD50Q9ULJ7 1429 aa23.52■■□□□ 1.36
SMARCD1-201ENST00000381513 LETM1O95202 739 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms