RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 HDGFP51858 240 aaKnown RBP24.77■■□□□ 1.56
VCX3A-201ENST00000381089 PPP1R15AO75807 674 aaPredicted RBP24.74■■□□□ 1.55
VCX3A-201ENST00000381089 NWD1Q149M9 1564 aa24.73■■□□□ 1.55
VCX3A-201ENST00000381089 MSH6P52701 1360 aa24.73■■□□□ 1.55
VCX3A-201ENST00000381089 ROBO1Q9Y6N7 1651 aa24.72■■□□□ 1.55
VCX3A-201ENST00000381089 RBM33Q96EV2 1170 aaKnown RBP24.7■■□□□ 1.54
VCX3A-201ENST00000381089 PLEKHG1Q9ULL1 1385 aa24.69■■□□□ 1.54
VCX3A-201ENST00000381089 RGS17Q9UGC6 210 aaPredicted RBP24.68■■□□□ 1.54
VCX3A-201ENST00000381089 ZFYVE9O95405 1425 aa24.68■■□□□ 1.54
VCX3A-201ENST00000381089 RIMS2Q9UQ26 1411 aa24.68■■□□□ 1.54
VCX3A-201ENST00000381089 GCC2Q8IWJ2 1684 aa24.66■■□□□ 1.54
VCX3A-201ENST00000381089 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.66■■□□□ 1.54
VCX3A-201ENST00000381089 MYO5BQ9ULV0 1848 aa24.64■■□□□ 1.54
VCX3A-201ENST00000381089 CHGAP10645 457 aaKnown RBP24.64■■□□□ 1.54
VCX3A-201ENST00000381089 SLAIN2Q9P270 581 aa24.64■■□□□ 1.54
VCX3A-201ENST00000381089 TMEM131LA2VDJ0 1609 aa24.63■■□□□ 1.53
VCX3A-201ENST00000381089 UNC13BO14795 1591 aa24.63■■□□□ 1.53
VCX3A-201ENST00000381089 CHD2O14647 1828 aaKnown RBP24.62■■□□□ 1.53
VCX3A-201ENST00000381089 TBX22Q9Y458 520 aa24.61■■□□□ 1.53
VCX3A-201ENST00000381089 C14orf37Q86TY3 774 aa24.6■■□□□ 1.53
VCX3A-201ENST00000381089 NCOA3Q9Y6Q9 1424 aa24.6■■□□□ 1.53
VCX3A-201ENST00000381089 PHLPP1O60346 1717 aa24.59■■□□□ 1.53
VCX3A-201ENST00000381089 ROCK1Q13464 1354 aa24.58■■□□□ 1.53
VCX3A-201ENST00000381089 JCADQ9P266 1359 aa24.57■■□□□ 1.52
VCX3A-201ENST00000381089 DIP2AQ14689 1571 aa24.56■■□□□ 1.52
VCX3A-201ENST00000381089 E9PCH4 1651 aa24.56■■□□□ 1.52
VCX3A-201ENST00000381089 POTEAQ6S8J7 498 aa24.55■■□□□ 1.52
VCX3A-201ENST00000381089 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
VCX3A-201ENST00000381089 IQGAP3Q86VI3 1631 aa24.54■■□□□ 1.52
VCX3A-201ENST00000381089 CADPS2Q86UW7 1296 aa24.53■■□□□ 1.52
VCX3A-201ENST00000381089 ATF3P18847 181 aa24.52■■□□□ 1.52
VCX3A-201ENST00000381089 NUTM2DQ5VT03 806 aaPredicted RBP24.51■■□□□ 1.51
VCX3A-201ENST00000381089 NUP155O75694 1391 aa24.51■■□□□ 1.51
VCX3A-201ENST00000381089 ADAMTS13Q76LX8 1427 aa24.51■■□□□ 1.51
VCX3A-201ENST00000381089 C19orf44Q9H6X5 657 aa24.5■■□□□ 1.51
VCX3A-201ENST00000381089 TRPM2O94759 1503 aa24.49■■□□□ 1.51
VCX3A-201ENST00000381089 COL16A1Q07092 1604 aaPredicted RBP24.47■■□□□ 1.51
VCX3A-201ENST00000381089 SPATA31A6Q5VVP1 1343 aa24.47■■□□□ 1.51
VCX3A-201ENST00000381089 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.45■■□□□ 1.5
VCX3A-201ENST00000381089 ITGAEP38570 1179 aa24.45■■□□□ 1.5
VCX3A-201ENST00000381089 MEX3CQ5U5Q3 659 aaKnown RBP24.45■■□□□ 1.5
VCX3A-201ENST00000381089 AMOTL2Q9Y2J4 779 aa24.44■■□□□ 1.5
VCX3A-201ENST00000381089 AHDC1Q5TGY3 1603 aaPredicted RBP24.42■■□□□ 1.5
VCX3A-201ENST00000381089 ZNF772Q68DY9 489 aaPredicted RBP24.4■■□□□ 1.5
VCX3A-201ENST00000381089 DCCP43146 1447 aa24.39■■□□□ 1.5
VCX3A-201ENST00000381089 ZNF326Q5BKZ1 582 aaKnown RBP24.39■■□□□ 1.49
VCX3A-201ENST00000381089 SPHKAPQ2M3C7 1700 aa24.37■■□□□ 1.49
VCX3A-201ENST00000381089 SHPRHQ149N8 1683 aa24.37■■□□□ 1.49
VCX3A-201ENST00000381089 PTPRUQ92729 1446 aa24.36■■□□□ 1.49
VCX3A-201ENST00000381089 SETBP1Q9Y6X0 1596 aa24.36■■□□□ 1.49
VCX3A-201ENST00000381089 LRP6O75581 1613 aa24.35■■□□□ 1.49
VCX3A-201ENST00000381089 BRINP3Q76B58 766 aa24.35■■□□□ 1.49
VCX3A-201ENST00000381089 SETD1AO15047 1707 aaKnown RBP24.34■■□□□ 1.49
VCX3A-201ENST00000381089 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
VCX3A-201ENST00000381089 NRXN3Q9Y4C0 1643 aa24.31■■□□□ 1.48
VCX3A-201ENST00000381089 ASXL1Q8IXJ9 1541 aa24.3■■□□□ 1.48
VCX3A-201ENST00000381089 NUTM2BA6NNL0 878 aaPredicted RBP24.28■■□□□ 1.48
VCX3A-201ENST00000381089 NUTM2EB1AL46 878 aaPredicted RBP24.28■■□□□ 1.48
VCX3A-201ENST00000381089 NUTM2AQ8IVF1 878 aaPredicted RBP24.28■■□□□ 1.48
VCX3A-201ENST00000381089 PPARGC1BQ86YN6 1023 aaKnown RBP24.27■■□□□ 1.48
VCX3A-201ENST00000381089 METP08581 1390 aa24.27■■□□□ 1.48
VCX3A-201ENST00000381089 MST1RQ04912 1400 aa24.27■■□□□ 1.48
VCX3A-201ENST00000381089 TRIM52Q96A61 297 aa24.26■■□□□ 1.47
VCX3A-201ENST00000381089 SETD5Q9C0A6 1442 aa24.26■■□□□ 1.47
VCX3A-201ENST00000381089 RXRBP28702 533 aa24.25■■□□□ 1.47
VCX3A-201ENST00000381089 LRRC59Q96AG4 307 aaKnown RBP24.25■■□□□ 1.47
VCX3A-201ENST00000381089 ADGRL3Q9HAR2 1447 aa24.24■■□□□ 1.47
VCX3A-201ENST00000381089 NEXMIFQ5QGS0 1516 aa24.23■■□□□ 1.47
VCX3A-201ENST00000381089 CLTCL1P53675 1640 aa24.23■■□□□ 1.47
VCX3A-201ENST00000381089 NHSL1Q5SYE7 1610 aa24.23■■□□□ 1.47
VCX3A-201ENST00000381089 KIF1BO60333 1816 aa24.22■■□□□ 1.47
VCX3A-201ENST00000381089 AFF2P51816 1311 aa24.19■■□□□ 1.46
VCX3A-201ENST00000381089 VGFO15240 615 aaPredicted RBP24.18■■□□□ 1.46
VCX3A-201ENST00000381089 UPF1Q92900 1129 aaKnown RBP eCLIP24.18■■□□□ 1.46
VCX3A-201ENST00000381089 CDK12Q9NYV4 1490 aaPredicted RBP24.18■■□□□ 1.46
VCX3A-201ENST00000381089 NALCNQ8IZF0 1738 aa24.16■■□□□ 1.46
VCX3A-201ENST00000381089 RRBP1Q9P2E9 1410 aaKnown RBP24.16■■□□□ 1.46
VCX3A-201ENST00000381089 NAIPQ13075 1403 aa24.15■■□□□ 1.46
VCX3A-201ENST00000381089 PTCH1Q13635 1447 aa24.15■■□□□ 1.46
VCX3A-201ENST00000381089 C8orf37Q96NL8 207 aa24.14■■□□□ 1.45
VCX3A-201ENST00000381089 PNPLA6Q8IY17 1366 aa24.14■■□□□ 1.45
VCX3A-201ENST00000381089 C1orf167Q5SNV9 1468 aa24.13■■□□□ 1.45
VCX3A-201ENST00000381089 RPGRIP1LQ68CZ1 1315 aa24.12■■□□□ 1.45
VCX3A-201ENST00000381089 DDX17Q92841 729 aaKnown RBP24.12■■□□□ 1.45
VCX3A-201ENST00000381089 RBM6P78332 1123 aaKnown RBP24.09■■□□□ 1.45
VCX3A-201ENST00000381089 QTRT2Q9H974 415 aaKnown RBP24.09■■□□□ 1.45
VCX3A-201ENST00000381089 SLC4A1APQ9BWU0 796 aaKnown RBP24.08■■□□□ 1.45
VCX3A-201ENST00000381089 ROBO2Q9HCK4 1378 aa24.07■■□□□ 1.44
VCX3A-201ENST00000381089 NGLY1Q96IV0 654 aa24.07■■□□□ 1.44
VCX3A-201ENST00000381089 HFM1A2PYH4 1435 aa24.06■■□□□ 1.44
VCX3A-201ENST00000381089 PRAG1Q86YV5 1406 aa24.05■■□□□ 1.44
VCX3A-201ENST00000381089 ADAMTS2O95450 1211 aa24.05■■□□□ 1.44
VCX3A-201ENST00000381089 LAMC1P11047 1609 aa24.05■■□□□ 1.44
VCX3A-201ENST00000381089 SOS2Q07890 1332 aaPredicted RBP24.04■■□□□ 1.44
VCX3A-201ENST00000381089 ORAI2Q96SN7 254 aa24.03■■□□□ 1.44
VCX3A-201ENST00000381089 RGS12O14924 1447 aa24.01■■□□□ 1.43
VCX3A-201ENST00000381089 PPLO60437 1756 aa24.01■■□□□ 1.43
VCX3A-201ENST00000381089 USP21Q9UK80 565 aa23.98■■□□□ 1.43
VCX3A-201ENST00000381089 NPHP3Q7Z494 1330 aa23.98■■□□□ 1.43
VCX3A-201ENST00000381089 TRPC5Q9UL62 973 aaPredicted RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms