RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 BCANQ96GW7 911 aa27.43■■□□□ 1.98
HMGN1-203ENST00000380748 DAPK1P53355 1430 aa27.42■■□□□ 1.98
HMGN1-203ENST00000380748 CHD2O14647 1828 aaKnown RBP27.39■■□□□ 1.97
HMGN1-203ENST00000380748 UPF1Q92900 1129 aaKnown RBP eCLIP27.38■■□□□ 1.97
HMGN1-203ENST00000380748 ZFYVE9O95405 1425 aa27.36■■□□□ 1.97
HMGN1-203ENST00000380748 TRIM52Q96A61 297 aa27.35■■□□□ 1.97
HMGN1-203ENST00000380748 SLC52A1Q9NWF4 448 aa27.35■■□□□ 1.97
HMGN1-203ENST00000380748 CHIC2Q9UKJ5 165 aa27.35■■□□□ 1.97
HMGN1-203ENST00000380748 PLEKHG1Q9ULL1 1385 aa27.35■■□□□ 1.97
HMGN1-203ENST00000380748 MYO5BQ9ULV0 1848 aa27.34■■□□□ 1.97
HMGN1-203ENST00000380748 MEX3CQ5U5Q3 659 aaKnown RBP27.34■■□□□ 1.97
HMGN1-203ENST00000380748 SPATA31A6Q5VVP1 1343 aa27.34■■□□□ 1.97
HMGN1-203ENST00000380748 ANKRD30AQ9BXX3 1397 aa27.34■■□□□ 1.97
HMGN1-203ENST00000380748 FGD6Q6ZV73 1430 aa27.33■■□□□ 1.97
HMGN1-203ENST00000380748 ZNF772Q68DY9 489 aaPredicted RBP27.31■■□□□ 1.96
HMGN1-203ENST00000380748 RIMS2Q9UQ26 1411 aa27.31■■□□□ 1.96
HMGN1-203ENST00000380748 GCC2Q8IWJ2 1684 aa27.3■■□□□ 1.96
HMGN1-203ENST00000380748 PPP1R15AO75807 674 aaPredicted RBP27.29■■□□□ 1.96
HMGN1-203ENST00000380748 AHDC1Q5TGY3 1603 aaPredicted RBP27.29■■□□□ 1.96
HMGN1-203ENST00000380748 SHPRHQ149N8 1683 aa27.29■■□□□ 1.96
HMGN1-203ENST00000380748 NCOA3Q9Y6Q9 1424 aa27.27■■□□□ 1.96
HMGN1-203ENST00000380748 C14orf37Q86TY3 774 aa27.27■■□□□ 1.96
HMGN1-203ENST00000380748 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.26■■□□□ 1.95
HMGN1-203ENST00000380748 TMEM131LA2VDJ0 1609 aa27.26■■□□□ 1.95
HMGN1-203ENST00000380748 RPRD2Q5VT52 1461 aaKnown RBP27.25■■□□□ 1.95
HMGN1-203ENST00000380748 LOC105371045A0A1W2PR82 267 aa27.24■■□□□ 1.95
HMGN1-203ENST00000380748 TBX22Q9Y458 520 aa27.24■■□□□ 1.95
HMGN1-203ENST00000380748 CADPS2Q86UW7 1296 aa27.22■■□□□ 1.95
HMGN1-203ENST00000380748 ADAMTS13Q76LX8 1427 aa27.22■■□□□ 1.95
HMGN1-203ENST00000380748 RXRBP28702 533 aa27.21■■□□□ 1.95
HMGN1-203ENST00000380748 HDGFP51858 240 aaKnown RBP27.2■■□□□ 1.94
HMGN1-203ENST00000380748 DIP2AQ14689 1571 aa27.2■■□□□ 1.94
HMGN1-203ENST00000380748 ADGRL2O95490 1459 aa27.19■■□□□ 1.94
HMGN1-203ENST00000380748 ATF3P18847 181 aa27.19■■□□□ 1.94
HMGN1-203ENST00000380748 C19orf44Q9H6X5 657 aa27.19■■□□□ 1.94
HMGN1-203ENST00000380748 NUTM2BA6NNL0 878 aaPredicted RBP27.18■■□□□ 1.94
HMGN1-203ENST00000380748 NUTM2EB1AL46 878 aaPredicted RBP27.18■■□□□ 1.94
HMGN1-203ENST00000380748 NUTM2DQ5VT03 806 aaPredicted RBP27.18■■□□□ 1.94
HMGN1-203ENST00000380748 NUTM2AQ8IVF1 878 aaPredicted RBP27.18■■□□□ 1.94
HMGN1-203ENST00000380748 CDK12Q9NYV4 1490 aaPredicted RBP27.17■■□□□ 1.94
HMGN1-203ENST00000380748 BRINP3Q76B58 766 aa27.16■■□□□ 1.94
HMGN1-203ENST00000380748 SRCAPQ6ZRS2 3230 aa27.16■■□□□ 1.94
HMGN1-203ENST00000380748 CHGAP10645 457 aaKnown RBP27.15■■□□□ 1.94
HMGN1-203ENST00000380748 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.14■■□□□ 1.94
HMGN1-203ENST00000380748 ANKRD50Q9ULJ7 1429 aa27.14■■□□□ 1.93
HMGN1-203ENST00000380748 PIK3R4Q99570 1358 aa27.13■■□□□ 1.93
HMGN1-203ENST00000380748 AFF2P51816 1311 aa27.13■■□□□ 1.93
HMGN1-203ENST00000380748 APLP2Q06481 763 aa27.11■■□□□ 1.93
HMGN1-203ENST00000380748 PTPRUQ92729 1446 aa27.1■■□□□ 1.93
HMGN1-203ENST00000380748 ASXL1Q8IXJ9 1541 aa27.1■■□□□ 1.93
HMGN1-203ENST00000380748 TRPM2O94759 1503 aa27.09■■□□□ 1.93
HMGN1-203ENST00000380748 AMOTL2Q9Y2J4 779 aa27.08■■□□□ 1.93
HMGN1-203ENST00000380748 RGS12O14924 1447 aa27.07■■□□□ 1.92
HMGN1-203ENST00000380748 SETD5Q9C0A6 1442 aa27.07■■□□□ 1.92
HMGN1-203ENST00000380748 E9PCH4 1651 aa27.06■■□□□ 1.92
HMGN1-203ENST00000380748 DCCP43146 1447 aa27.06■■□□□ 1.92
HMGN1-203ENST00000380748 UNC13BO14795 1591 aa27.05■■□□□ 1.92
HMGN1-203ENST00000380748 NHSL1Q5SYE7 1610 aa27.05■■□□□ 1.92
HMGN1-203ENST00000380748 MST1RQ04912 1400 aa27.03■■□□□ 1.92
HMGN1-203ENST00000380748 FAM50AQ14320 339 aaKnown RBP27.03■■□□□ 1.92
HMGN1-203ENST00000380748 C8orf37Q96NL8 207 aa27.01■■□□□ 1.91
HMGN1-203ENST00000380748 XRN1Q8IZH2 1706 aaKnown RBP27.01■■□□□ 1.91
HMGN1-203ENST00000380748 DDX17Q92841 729 aaKnown RBP26.98■■□□□ 1.91
HMGN1-203ENST00000380748 QTRT2Q9H974 415 aaKnown RBP26.98■■□□□ 1.91
HMGN1-203ENST00000380748 NRXN3Q9Y4C0 1643 aa26.98■■□□□ 1.91
HMGN1-203ENST00000380748 PNPLA6Q8IY17 1366 aa26.97■■□□□ 1.91
HMGN1-203ENST00000380748 RBM6P78332 1123 aaKnown RBP26.97■■□□□ 1.91
HMGN1-203ENST00000380748 LRRC59Q96AG4 307 aaKnown RBP26.97■■□□□ 1.91
HMGN1-203ENST00000380748 IQGAP3Q86VI3 1631 aa26.94■■□□□ 1.9
HMGN1-203ENST00000380748 SETBP1Q9Y6X0 1596 aa26.92■■□□□ 1.9
HMGN1-203ENST00000380748 METP08581 1390 aa26.9■■□□□ 1.9
HMGN1-203ENST00000380748 ADGRL3Q9HAR2 1447 aa26.89■■□□□ 1.89
HMGN1-203ENST00000380748 ADAMTS2O95450 1211 aa26.88■■□□□ 1.89
HMGN1-203ENST00000380748 NALCNQ8IZF0 1738 aa26.87■■□□□ 1.89
HMGN1-203ENST00000380748 NGLY1Q96IV0 654 aa26.87■■□□□ 1.89
HMGN1-203ENST00000380748 ATAD2Q6PL18 1390 aa26.85■■□□□ 1.89
HMGN1-203ENST00000380748 NUP155O75694 1391 aa26.84■■□□□ 1.89
HMGN1-203ENST00000380748 EP400Q96L91 3159 aa26.82■■□□□ 1.88
HMGN1-203ENST00000380748 C1orf167Q5SNV9 1468 aa26.81■■□□□ 1.88
HMGN1-203ENST00000380748 ZNF326Q5BKZ1 582 aaKnown RBP26.8■■□□□ 1.88
HMGN1-203ENST00000380748 ROCK1Q13464 1354 aa26.8■■□□□ 1.88
HMGN1-203ENST00000380748 LAMC1P11047 1609 aa26.79■■□□□ 1.88
HMGN1-203ENST00000380748 USP21Q9UK80 565 aa26.79■■□□□ 1.88
HMGN1-203ENST00000380748 SPHKAPQ2M3C7 1700 aa26.79■■□□□ 1.88
HMGN1-203ENST00000380748 TRPC5Q9UL62 973 aaPredicted RBP26.76■■□□□ 1.87
HMGN1-203ENST00000380748 SOS2Q07890 1332 aaPredicted RBP26.74■■□□□ 1.87
HMGN1-203ENST00000380748 ZRANB1Q9UGI0 708 aa26.74■■□□□ 1.87
HMGN1-203ENST00000380748 NEXMIFQ5QGS0 1516 aa26.74■■□□□ 1.87
HMGN1-203ENST00000380748 ATRNO75882 1429 aa26.73■■□□□ 1.87
HMGN1-203ENST00000380748 ORAI2Q96SN7 254 aa26.73■■□□□ 1.87
HMGN1-203ENST00000380748 PTCH1Q13635 1447 aa26.73■■□□□ 1.87
HMGN1-203ENST00000380748 FNBP4Q8N3X1 1017 aaPredicted RBP26.72■■□□□ 1.87
HMGN1-203ENST00000380748 CLTCL1P53675 1640 aa26.68■■□□□ 1.86
HMGN1-203ENST00000380748 COL22A1Q8NFW1 1626 aaPredicted RBP26.68■■□□□ 1.86
HMGN1-203ENST00000380748 FOXD1Q16676 465 aa26.67■■□□□ 1.86
HMGN1-203ENST00000380748 ROBO2Q9HCK4 1378 aa26.67■■□□□ 1.86
HMGN1-203ENST00000380748 MYOM2P54296 1465 aa26.64■■□□□ 1.86
HMGN1-203ENST00000380748 ITGAEP38570 1179 aa26.64■■□□□ 1.86
HMGN1-203ENST00000380748 BCL9LQ86UU0 1499 aa26.62■■□□□ 1.85
HMGN1-203ENST00000380748 CCDC125Q86Z20 511 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms