RNA–Protein interactions for RNA: ENST00000380486.3

C2CD2-202, Transcript of C2 calcium dependent domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD2, Length 6,345 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD2-202ENST00000380486 PDE3BQ13370 1112 aa23.5■■□□□ 1.35
C2CD2-202ENST00000380486 SYNE3Q6ZMZ3 975 aa23.5■■□□□ 1.35
C2CD2-202ENST00000380486 DHX16O60231 1041 aaKnown RBP23.5■■□□□ 1.35
C2CD2-202ENST00000380486 APAF1O14727 1248 aa23.49■■□□□ 1.35
C2CD2-202ENST00000380486 C1orf141Q5JVX7 400 aa23.49■■□□□ 1.35
C2CD2-202ENST00000380486 CCDC70Q6NSX1 233 aa23.49■■□□□ 1.35
C2CD2-202ENST00000380486 TRIM29Q14134 588 aa23.48■■□□□ 1.35
C2CD2-202ENST00000380486 USP35Q9P2H5 1018 aa23.48■■□□□ 1.35
C2CD2-202ENST00000380486 HDAC5Q9UQL6 1122 aa23.48■■□□□ 1.35
C2CD2-202ENST00000380486 C9orf78Q9NZ63 289 aaPredicted RBP23.47■■□□□ 1.35
C2CD2-202ENST00000380486 FMN1Q68DA7 1419 aa23.47■■□□□ 1.35
C2CD2-202ENST00000380486 GPS2Q13227 327 aa23.47■■□□□ 1.35
C2CD2-202ENST00000380486 NAP1L1P55209 391 aaKnown RBP23.47■■□□□ 1.35
C2CD2-202ENST00000380486 SKIDA1Q1XH10 827 aa23.46■■□□□ 1.35
C2CD2-202ENST00000380486 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
C2CD2-202ENST00000380486 NFXL1Q6ZNB6 911 aa23.46■■□□□ 1.35
C2CD2-202ENST00000380486 ATP6V1DQ9Y5K8 247 aa23.46■■□□□ 1.35
C2CD2-202ENST00000380486 IFT57Q9NWB7 429 aa23.45■■□□□ 1.34
C2CD2-202ENST00000380486 TTLL5Q6EMB2 1281 aa23.45■■□□□ 1.34
C2CD2-202ENST00000380486 FYB1O15117 783 aa23.44■■□□□ 1.34
C2CD2-202ENST00000380486 CHMP4AQ9BY43 222 aa23.44■■□□□ 1.34
C2CD2-202ENST00000380486 IFIT2P09913 472 aaKnown RBP23.44■■□□□ 1.34
C2CD2-202ENST00000380486 MTMR7Q9Y216 660 aa23.44■■□□□ 1.34
C2CD2-202ENST00000380486 MINK1Q8N4C8 1332 aaPredicted RBP23.44■■□□□ 1.34
C2CD2-202ENST00000380486 NOL10Q9BSC4 688 aaKnown RBP23.44■■□□□ 1.34
C2CD2-202ENST00000380486 E9PSI1 815 aa23.43■■□□□ 1.34
C2CD2-202ENST00000380486 CARMIL2Q6F5E8 1435 aa23.43■■□□□ 1.34
C2CD2-202ENST00000380486 DCAF8L1A6NGE4 600 aa23.43■■□□□ 1.34
C2CD2-202ENST00000380486 R3HCC1Q9Y3T6 440 aaKnown RBP23.43■■□□□ 1.34
C2CD2-202ENST00000380486 COG3Q96JB2 828 aa23.42■■□□□ 1.34
C2CD2-202ENST00000380486 CPLX1O14810 134 aa23.42■■□□□ 1.34
C2CD2-202ENST00000380486 CECR2Q9BXF3 1484 aa23.42■■□□□ 1.34
C2CD2-202ENST00000380486 CCDC88BA6NC98 1476 aa23.41■■□□□ 1.34
C2CD2-202ENST00000380486 FHOD3Q2V2M9 1422 aa23.41■■□□□ 1.34
C2CD2-202ENST00000380486 LNPKQ9C0E8 428 aa23.41■■□□□ 1.34
C2CD2-202ENST00000380486 CCDC27Q2M243 656 aa23.4■■□□□ 1.34
C2CD2-202ENST00000380486 SASS6Q6UVJ0 657 aa23.4■■□□□ 1.34
C2CD2-202ENST00000380486 RNF214Q8ND24 703 aa23.4■■□□□ 1.34
C2CD2-202ENST00000380486 PDILTQ8N807 584 aa23.39■■□□□ 1.33
C2CD2-202ENST00000380486 ZNF428Q96B54 188 aa23.39■■□□□ 1.33
C2CD2-202ENST00000380486 RIPK4P57078 832 aa23.38■■□□□ 1.33
C2CD2-202ENST00000380486 TEX35Q5T0J7 233 aa23.38■■□□□ 1.33
C2CD2-202ENST00000380486 PHLDB1Q86UU1 1377 aa23.38■■□□□ 1.33
C2CD2-202ENST00000380486 AMOTL1Q8IY63 956 aa23.38■■□□□ 1.33
C2CD2-202ENST00000380486 ZKSCAN1P17029 563 aaPredicted RBP23.37■■□□□ 1.33
C2CD2-202ENST00000380486 TEFQ10587 303 aa23.37■■□□□ 1.33
C2CD2-202ENST00000380486 SMC3Q9UQE7 1217 aa23.37■■□□□ 1.33
C2CD2-202ENST00000380486 VPS37DQ86XT2 251 aa23.37■■□□□ 1.33
C2CD2-202ENST00000380486 PRKRIP1Q9H875 184 aaPredicted RBP23.37■■□□□ 1.33
C2CD2-202ENST00000380486 TTC5Q8N0Z6 440 aa23.36■■□□□ 1.33
C2CD2-202ENST00000380486 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
C2CD2-202ENST00000380486 FAM43AQ8N2R8 423 aa23.36■■□□□ 1.33
C2CD2-202ENST00000380486 HMOX1P09601 288 aa23.36■■□□□ 1.33
C2CD2-202ENST00000380486 PANK1Q8TE04 598 aa23.36■■□□□ 1.33
C2CD2-202ENST00000380486 IPO7O95373 1038 aaKnown RBP23.36■■□□□ 1.33
C2CD2-202ENST00000380486 RUFY2Q8WXA3 655 aa23.35■■□□□ 1.33
C2CD2-202ENST00000380486 CHMP5Q9NZZ3 219 aa23.35■■□□□ 1.33
C2CD2-202ENST00000380486 DZIP1LQ8IYY4 767 aaKnown RBP23.35■■□□□ 1.33
C2CD2-202ENST00000380486 REC8O95072 547 aa23.34■■□□□ 1.33
C2CD2-202ENST00000380486 FKBP5Q13451 457 aaPredicted RBP23.34■■□□□ 1.33
C2CD2-202ENST00000380486 CGNL1Q0VF96 1302 aa23.34■■□□□ 1.33
C2CD2-202ENST00000380486 AIMP1Q12904 312 aaKnown RBP23.34■■□□□ 1.33
C2CD2-202ENST00000380486 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.34■■□□□ 1.33
C2CD2-202ENST00000380486 DHX37Q8IY37 1157 aaKnown RBP23.33■■□□□ 1.33
C2CD2-202ENST00000380486 NEXNQ0ZGT2 675 aa23.33■■□□□ 1.33
C2CD2-202ENST00000380486 RUFY1Q96T51 708 aa23.33■■□□□ 1.33
C2CD2-202ENST00000380486 ZBED9Q6R2W3 1325 aa23.33■■□□□ 1.32
C2CD2-202ENST00000380486 CYB5RLQ6IPT4 315 aa23.32■■□□□ 1.32
C2CD2-202ENST00000380486 MNS1Q8NEH6 495 aa23.32■■□□□ 1.32
C2CD2-202ENST00000380486 RBM10P98175 930 aaKnown RBP23.32■■□□□ 1.32
C2CD2-202ENST00000380486 DDX19BQ9UMR2 479 aa23.32■■□□□ 1.32
C2CD2-202ENST00000380486 NFKBIBQ15653 356 aa23.31■■□□□ 1.32
C2CD2-202ENST00000380486 ANKRD20A12PQ8NF67 263 aa23.31■■□□□ 1.32
C2CD2-202ENST00000380486 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.31■■□□□ 1.32
C2CD2-202ENST00000380486 PPP1R1BQ9UD71 204 aaPredicted RBP23.31■■□□□ 1.32
C2CD2-202ENST00000380486 C22orf23Q9BZE7 217 aa23.3■■□□□ 1.32
C2CD2-202ENST00000380486 USP47Q96K76 1375 aa23.3■■□□□ 1.32
C2CD2-202ENST00000380486 NEUROD6Q96NK8 337 aa23.3■■□□□ 1.32
C2CD2-202ENST00000380486 CPLX2Q6PUV4 134 aaKnown RBP23.29■■□□□ 1.32
C2CD2-202ENST00000380486 G3BP1Q13283 466 aaKnown RBP eCLIP23.29■■□□□ 1.32
C2CD2-202ENST00000380486 MPNDQ8N594 471 aa23.29■■□□□ 1.32
C2CD2-202ENST00000380486 CCDC47Q96A33 483 aaKnown RBP23.29■■□□□ 1.32
C2CD2-202ENST00000380486 TRDNQ13061 729 aa23.29■■□□□ 1.32
C2CD2-202ENST00000380486 RRP12Q5JTH9 1297 aaKnown RBP23.29■■□□□ 1.32
C2CD2-202ENST00000380486 CCDC144AA2RUR9 1427 aa23.29■■□□□ 1.32
C2CD2-202ENST00000380486 NUTM2GQ5VZR2 741 aa23.28■■□□□ 1.32
C2CD2-202ENST00000380486 ERICH2A1L162 156 aa23.27■■□□□ 1.32
C2CD2-202ENST00000380486 INTS3Q68E01 1043 aaKnown RBP23.27■■□□□ 1.32
C2CD2-202ENST00000380486 DIAPH1O60610 1272 aaKnown RBP23.27■■□□□ 1.32
C2CD2-202ENST00000380486 FANCIQ9NVI1 1328 aa23.26■■□□□ 1.31
C2CD2-202ENST00000380486 PSME1Q06323 249 aa23.26■■□□□ 1.31
C2CD2-202ENST00000380486 WASHC4Q2M389 1173 aa23.26■■□□□ 1.31
C2CD2-202ENST00000380486 AK7Q96M32 723 aa23.26■■□□□ 1.31
C2CD2-202ENST00000380486 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
C2CD2-202ENST00000380486 CAGE1Q8TC20 777 aa23.26■■□□□ 1.31
C2CD2-202ENST00000380486 HOOK1Q9UJC3 728 aaKnown RBP23.26■■□□□ 1.31
C2CD2-202ENST00000380486 CALRP27797 417 aaKnown RBP23.25■■□□□ 1.31
C2CD2-202ENST00000380486 STK11IPQ8N1F8 1099 aa23.25■■□□□ 1.31
C2CD2-202ENST00000380486 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.25■■□□□ 1.314e-6■■■■■ 106.6
C2CD2-202ENST00000380486 EVC2Q86UK5 1308 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms