RNA–Protein interactions for RNA: ENST00000380327.9

TROAP-202, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TROAP, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-202ENST00000380327 NKTRP30414 1462 aaKnown RBP17.7■□□□□ 0.42
TROAP-202ENST00000380327 SLC26A8Q96RN1 970 aa17.7■□□□□ 0.42
TROAP-202ENST00000380327 ZFYVE9O95405 1425 aa17.7■□□□□ 0.42
TROAP-202ENST00000380327 TMEM94Q12767 1356 aa17.69■□□□□ 0.42
TROAP-202ENST00000380327 ITGAEP38570 1179 aa17.68■□□□□ 0.42
TROAP-202ENST00000380327 BCANQ96GW7 911 aa17.68■□□□□ 0.42
TROAP-202ENST00000380327 RIMS2Q9UQ26 1411 aa17.67■□□□□ 0.42
TROAP-202ENST00000380327 PLEKHG1Q9ULL1 1385 aa17.66■□□□□ 0.42
TROAP-202ENST00000380327 PPP1R15AO75807 674 aaPredicted RBP17.66■□□□□ 0.42
TROAP-202ENST00000380327 KCNA6P17658 529 aa17.66■□□□□ 0.42
TROAP-202ENST00000380327 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
TROAP-202ENST00000380327 ROBO1Q9Y6N7 1651 aa17.64■□□□□ 0.41
TROAP-202ENST00000380327 NUP155O75694 1391 aa17.64■□□□□ 0.41
TROAP-202ENST00000380327 CHGAP10645 457 aaKnown RBP17.63■□□□□ 0.41
TROAP-202ENST00000380327 PROSER2Q86WR7 435 aaPredicted RBP17.63■□□□□ 0.41
TROAP-202ENST00000380327 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
TROAP-202ENST00000380327 DIP2AQ14689 1571 aa17.62■□□□□ 0.41
TROAP-202ENST00000380327 CHD2O14647 1828 aaKnown RBP17.62■□□□□ 0.41
TROAP-202ENST00000380327 SPHKAPQ2M3C7 1700 aa17.61■□□□□ 0.41
TROAP-202ENST00000380327 HDGFP51858 240 aaKnown RBP17.61■□□□□ 0.41
TROAP-202ENST00000380327 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
TROAP-202ENST00000380327 FAM135BQ49AJ0 1406 aa17.61■□□□□ 0.41
TROAP-202ENST00000380327 MSH6P52701 1360 aa17.6■□□□□ 0.41
TROAP-202ENST00000380327 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.59■□□□□ 0.41
TROAP-202ENST00000380327 ADAMTS13Q76LX8 1427 aa17.56■□□□□ 0.4
TROAP-202ENST00000380327 RRBP1Q9P2E9 1410 aaKnown RBP17.56■□□□□ 0.4
TROAP-202ENST00000380327 NUTM2DQ5VT03 806 aaPredicted RBP17.56■□□□□ 0.4
TROAP-202ENST00000380327 TRPM2O94759 1503 aa17.56■□□□□ 0.4
TROAP-202ENST00000380327 TBX22Q9Y458 520 aa17.53■□□□□ 0.4
TROAP-202ENST00000380327 PHLPP1O60346 1717 aa17.52■□□□□ 0.4
TROAP-202ENST00000380327 CLTCL1P53675 1640 aa17.52■□□□□ 0.4
TROAP-202ENST00000380327 PIK3R4Q99570 1358 aa17.52■□□□□ 0.39
TROAP-202ENST00000380327 NRXN3Q9Y4C0 1643 aa17.51■□□□□ 0.39
TROAP-202ENST00000380327 SETBP1Q9Y6X0 1596 aa17.51■□□□□ 0.39
TROAP-202ENST00000380327 NAIPQ13075 1403 aa17.5■□□□□ 0.39
TROAP-202ENST00000380327 NCOA3Q9Y6Q9 1424 aa17.5■□□□□ 0.39
TROAP-202ENST00000380327 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
TROAP-202ENST00000380327 SLAIN2Q9P270 581 aa17.49■□□□□ 0.39
TROAP-202ENST00000380327 XRN1Q8IZH2 1706 aaKnown RBP17.49■□□□□ 0.39
TROAP-202ENST00000380327 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.49■□□□□ 0.39
TROAP-202ENST00000380327 COL16A1Q07092 1604 aaPredicted RBP17.47■□□□□ 0.39
TROAP-202ENST00000380327 NEXMIFQ5QGS0 1516 aa17.47■□□□□ 0.39
TROAP-202ENST00000380327 ZNF326Q5BKZ1 582 aaKnown RBP17.46■□□□□ 0.39
TROAP-202ENST00000380327 HFM1A2PYH4 1435 aa17.46■□□□□ 0.39
TROAP-202ENST00000380327 PTPRUQ92729 1446 aa17.46■□□□□ 0.39
TROAP-202ENST00000380327 KIF1BO60333 1816 aa17.45■□□□□ 0.38
TROAP-202ENST00000380327 AMOTL2Q9Y2J4 779 aa17.44■□□□□ 0.38
TROAP-202ENST00000380327 AHDC1Q5TGY3 1603 aaPredicted RBP17.43■□□□□ 0.38
TROAP-202ENST00000380327 JCADQ9P266 1359 aa17.42■□□□□ 0.38
TROAP-202ENST00000380327 ATF3P18847 181 aa17.42■□□□□ 0.38
TROAP-202ENST00000380327 CADPS2Q86UW7 1296 aa17.42■□□□□ 0.38
TROAP-202ENST00000380327 C19orf44Q9H6X5 657 aa17.42■□□□□ 0.38
TROAP-202ENST00000380327 RGS17Q9UGC6 210 aaPredicted RBP17.42■□□□□ 0.38
TROAP-202ENST00000380327 DCCP43146 1447 aa17.41■□□□□ 0.38
TROAP-202ENST00000380327 METP08581 1390 aa17.4■□□□□ 0.38
TROAP-202ENST00000380327 TRIM52Q96A61 297 aa17.39■□□□□ 0.37
TROAP-202ENST00000380327 SHPRHQ149N8 1683 aa17.39■□□□□ 0.37
TROAP-202ENST00000380327 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
TROAP-202ENST00000380327 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
TROAP-202ENST00000380327 SETD1AO15047 1707 aaKnown RBP17.36■□□□□ 0.37
TROAP-202ENST00000380327 ADGRL3Q9HAR2 1447 aa17.36■□□□□ 0.37
TROAP-202ENST00000380327 LRP6O75581 1613 aa17.36■□□□□ 0.37
TROAP-202ENST00000380327 MST1RQ04912 1400 aa17.35■□□□□ 0.37
TROAP-202ENST00000380327 PPLO60437 1756 aa17.34■□□□□ 0.37
TROAP-202ENST00000380327 NHSL1Q5SYE7 1610 aa17.34■□□□□ 0.37
TROAP-202ENST00000380327 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
TROAP-202ENST00000380327 SPATA31A6Q5VVP1 1343 aa17.33■□□□□ 0.36
TROAP-202ENST00000380327 POTEAQ6S8J7 498 aa17.33■□□□□ 0.36
TROAP-202ENST00000380327 BRINP3Q76B58 766 aa17.33■□□□□ 0.36
TROAP-202ENST00000380327 PTCH1Q13635 1447 aa17.32■□□□□ 0.36
TROAP-202ENST00000380327 VGFO15240 615 aaPredicted RBP17.3■□□□□ 0.36
TROAP-202ENST00000380327 MEX3CQ5U5Q3 659 aaKnown RBP17.3■□□□□ 0.36
TROAP-202ENST00000380327 CCDC144AA2RUR9 1427 aa17.28■□□□□ 0.36
TROAP-202ENST00000380327 PRAG1Q86YV5 1406 aa17.28■□□□□ 0.36
TROAP-202ENST00000380327 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.36
TROAP-202ENST00000380327 ROBO2Q9HCK4 1378 aa17.27■□□□□ 0.35
TROAP-202ENST00000380327 FOXD1Q16676 465 aa17.26■□□□□ 0.35
TROAP-202ENST00000380327 SETD5Q9C0A6 1442 aa17.26■□□□□ 0.35
TROAP-202ENST00000380327 IFT172Q9UG01 1749 aa17.25■□□□□ 0.35
TROAP-202ENST00000380327 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
TROAP-202ENST00000380327 LAMC1P11047 1609 aa17.23■□□□□ 0.35
TROAP-202ENST00000380327 NUTM2BA6NNL0 878 aaPredicted RBP17.22■□□□□ 0.35
TROAP-202ENST00000380327 NUTM2EB1AL46 878 aaPredicted RBP17.22■□□□□ 0.35
TROAP-202ENST00000380327 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
TROAP-202ENST00000380327 NUTM2AQ8IVF1 878 aaPredicted RBP17.22■□□□□ 0.35
TROAP-202ENST00000380327 CDC42BPGQ6DT37 1551 aa17.22■□□□□ 0.35
TROAP-202ENST00000380327 SPATA31E1Q6ZUB1 1445 aa17.21■□□□□ 0.35
TROAP-202ENST00000380327 DDX17Q92841 729 aaKnown RBP17.2■□□□□ 0.34
TROAP-202ENST00000380327 LRRC59Q96AG4 307 aaKnown RBP17.2■□□□□ 0.34
TROAP-202ENST00000380327 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
TROAP-202ENST00000380327 MPHOSPH9Q99550 1183 aa17.19■□□□□ 0.34
TROAP-202ENST00000380327 ANKRD30BQ9BXX2 1392 aa17.18■□□□□ 0.34
TROAP-202ENST00000380327 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
TROAP-202ENST00000380327 ADGRF5Q8IZF2 1346 aa17.18■□□□□ 0.34
TROAP-202ENST00000380327 RGL3Q3MIN7 710 aa17.17■□□□□ 0.34
TROAP-202ENST00000380327 PIK3C2GO75747 1445 aa17.16■□□□□ 0.34
TROAP-202ENST00000380327 TECPR2O15040 1411 aa17.15■□□□□ 0.34
TROAP-202ENST00000380327 AFF2P51816 1311 aa17.15■□□□□ 0.34
TROAP-202ENST00000380327 ORAI2Q96SN7 254 aa17.14■□□□□ 0.33
TROAP-202ENST00000380327 C8orf37Q96NL8 207 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms