RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 DIAPH3Q9NSV4 1193 aa13.5□□□□□ -0.25
USP6NL-202ENST00000379237 UTP14CQ5TAP6 766 aaKnown RBP13.49□□□□□ -0.25
USP6NL-202ENST00000379237 IPO4Q8TEX9 1081 aaKnown RBP13.49□□□□□ -0.25
USP6NL-202ENST00000379237 ERICH4A6NGS2 130 aa13.49□□□□□ -0.25
USP6NL-202ENST00000379237 SSFA2P28290 1259 aa13.49□□□□□ -0.25
USP6NL-202ENST00000379237 DUSP27Q5VZP5 1158 aa13.48□□□□□ -0.25
USP6NL-202ENST00000379237 TSC1Q92574 1164 aa13.48□□□□□ -0.25
USP6NL-202ENST00000379237 TRERF1Q96PN7 1200 aa13.48□□□□□ -0.25
USP6NL-202ENST00000379237 PDE3AQ14432 1141 aa13.48□□□□□ -0.25
USP6NL-202ENST00000379237 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
USP6NL-202ENST00000379237 NOL7Q9UMY1 257 aaKnown RBP13.47□□□□□ -0.25
USP6NL-202ENST00000379237 AQRO60306 1485 aaKnown RBP eCLIP13.47□□□□□ -0.254e-7■■■■□ 26.7
USP6NL-202ENST00000379237 SMARCA4P51532 1647 aa13.47□□□□□ -0.25
USP6NL-202ENST00000379237 NUCB2P80303 420 aa13.47□□□□□ -0.25
USP6NL-202ENST00000379237 APPP05067 770 aa13.47□□□□□ -0.25
USP6NL-202ENST00000379237 RRP7AQ9Y3A4 280 aaKnown RBP13.46□□□□□ -0.25
USP6NL-202ENST00000379237 GTF2E1P29083 439 aaPredicted RBP13.46□□□□□ -0.26
USP6NL-202ENST00000379237 MCM5P33992 734 aa13.46□□□□□ -0.26
USP6NL-202ENST00000379237 MIA2Q96PC5 1412 aa13.46□□□□□ -0.26
USP6NL-202ENST00000379237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.45□□□□□ -0.26
USP6NL-202ENST00000379237 SYCE3A1L190 88 aa13.45□□□□□ -0.26
USP6NL-202ENST00000379237 KLHL40Q2TBA0 621 aa13.45□□□□□ -0.26
USP6NL-202ENST00000379237 HS1BP3Q53T59 392 aa13.45□□□□□ -0.26
USP6NL-202ENST00000379237 LRPPRCP42704 1394 aaKnown RBP13.45□□□□□ -0.26
USP6NL-202ENST00000379237 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
USP6NL-202ENST00000379237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.44□□□□□ -0.26
USP6NL-202ENST00000379237 K7ELQ4 463 aaPredicted RBP13.44□□□□□ -0.26
USP6NL-202ENST00000379237 PHF14O94880 888 aa13.44□□□□□ -0.26
USP6NL-202ENST00000379237 CASC1Q6TDU7 716 aa13.44□□□□□ -0.26
USP6NL-202ENST00000379237 PPP1R9BQ96SB3 815 aa13.44□□□□□ -0.26
USP6NL-202ENST00000379237 ZNF592Q92610 1267 aa13.43□□□□□ -0.26
USP6NL-202ENST00000379237 SLFN5Q08AF3 891 aa13.43□□□□□ -0.26
USP6NL-202ENST00000379237 NBPF1Q3BBV0 1214 aa13.43□□□□□ -0.26
USP6NL-202ENST00000379237 IRX3P78415 501 aaPredicted RBP13.43□□□□□ -0.26
USP6NL-202ENST00000379237 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
USP6NL-202ENST00000379237 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
USP6NL-202ENST00000379237 USP19O94966 1318 aa13.42□□□□□ -0.26
USP6NL-202ENST00000379237 GOLGA6L6A8MZA4 724 aa13.42□□□□□ -0.26
USP6NL-202ENST00000379237 U2SURPO15042 1029 aaKnown RBP13.42□□□□□ -0.26
USP6NL-202ENST00000379237 ZSCAN23Q3MJ62 389 aa13.42□□□□□ -0.26
USP6NL-202ENST00000379237 PRIMPOLQ96LW4 560 aa13.42□□□□□ -0.26
USP6NL-202ENST00000379237 NOL8Q76FK4 1167 aaKnown RBP13.42□□□□□ -0.26
USP6NL-202ENST00000379237 BAG4O95429 457 aaKnown RBP13.42□□□□□ -0.26
USP6NL-202ENST00000379237 PRIM1P49642 420 aaKnown RBP13.41□□□□□ -0.26
USP6NL-202ENST00000379237 AEBP2Q6ZN18 517 aaPredicted RBP13.41□□□□□ -0.26
USP6NL-202ENST00000379237 ZNF830Q96NB3 372 aaPredicted RBP13.41□□□□□ -0.26
USP6NL-202ENST00000379237 TSPY26PQ9H489 355 aa13.41□□□□□ -0.26
USP6NL-202ENST00000379237 RBM27Q9P2N5 1060 aaKnown RBP13.41□□□□□ -0.26
USP6NL-202ENST00000379237 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
USP6NL-202ENST00000379237 ST18O60284 1047 aa13.4□□□□□ -0.26
USP6NL-202ENST00000379237 ZNF500O60304 480 aaPredicted RBP13.4□□□□□ -0.26
USP6NL-202ENST00000379237 ANKRD45Q5TZF3 282 aa13.4□□□□□ -0.26
USP6NL-202ENST00000379237 PTPRKQ15262 1439 aa13.4□□□□□ -0.26
USP6NL-202ENST00000379237 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.27
USP6NL-202ENST00000379237 ZKSCAN2Q63HK3 967 aa13.39□□□□□ -0.27
USP6NL-202ENST00000379237 TIGD1Q96MW7 591 aa13.39□□□□□ -0.27
USP6NL-202ENST00000379237 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
USP6NL-202ENST00000379237 RAB3GAP1Q15042 981 aa13.39□□□□□ -0.27
USP6NL-202ENST00000379237 RBSNQ9H1K0 784 aa13.39□□□□□ -0.27
USP6NL-202ENST00000379237 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
USP6NL-202ENST00000379237 MYRIPQ8NFW9 859 aa13.39□□□□□ -0.27
USP6NL-202ENST00000379237 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
USP6NL-202ENST00000379237 U2AF2P26368 475 aaKnown RBP eCLIP13.38□□□□□ -0.271e-6■■■□□ 17.4
USP6NL-202ENST00000379237 CFDP1Q9UEE9 299 aaPredicted RBP13.38□□□□□ -0.27
USP6NL-202ENST00000379237 KIF16BQ96L93 1317 aa13.38□□□□□ -0.27
USP6NL-202ENST00000379237 TSPY4P0CV99 314 aa13.38□□□□□ -0.27
USP6NL-202ENST00000379237 TSPY10P0CW01 314 aa13.38□□□□□ -0.27
USP6NL-202ENST00000379237 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
USP6NL-202ENST00000379237 DZIP1LQ8IYY4 767 aaKnown RBP13.38□□□□□ -0.27
USP6NL-202ENST00000379237 IFT57Q9NWB7 429 aa13.37□□□□□ -0.27
USP6NL-202ENST00000379237 ZBTB22O15209 634 aa13.37□□□□□ -0.27
USP6NL-202ENST00000379237 ZSCAN20P17040 1043 aaPredicted RBP13.37□□□□□ -0.27
USP6NL-202ENST00000379237 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.27
USP6NL-202ENST00000379237 MBD3O95983 291 aa13.36□□□□□ -0.27
USP6NL-202ENST00000379237 ANKRD30BQ9BXX2 1392 aa13.36□□□□□ -0.27
USP6NL-202ENST00000379237 PPP2R1AP30153 589 aa13.36□□□□□ -0.27
USP6NL-202ENST00000379237 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
USP6NL-202ENST00000379237 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
USP6NL-202ENST00000379237 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
USP6NL-202ENST00000379237 APBB1O00213 710 aa13.36□□□□□ -0.27
USP6NL-202ENST00000379237 CALCOCO1Q9P1Z2 691 aa13.36□□□□□ -0.27
USP6NL-202ENST00000379237 NPM1P06748 294 aaKnown RBP eCLIP13.36□□□□□ -0.27
USP6NL-202ENST00000379237 IGF1RP08069 1367 aa13.35□□□□□ -0.27
USP6NL-202ENST00000379237 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
USP6NL-202ENST00000379237 CERS3Q8IU89 383 aa13.35□□□□□ -0.27
USP6NL-202ENST00000379237 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
USP6NL-202ENST00000379237 NUP155O75694 1391 aa13.35□□□□□ -0.27
USP6NL-202ENST00000379237 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
USP6NL-202ENST00000379237 SMC5Q8IY18 1101 aa13.34□□□□□ -0.27
USP6NL-202ENST00000379237 CFAP53Q96M91 514 aa13.34□□□□□ -0.27
USP6NL-202ENST00000379237 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
USP6NL-202ENST00000379237 USP25Q9UHP3 1055 aa13.34□□□□□ -0.27
USP6NL-202ENST00000379237 CFTRP13569 1480 aa13.34□□□□□ -0.27
USP6NL-202ENST00000379237 NPHP1O15259 732 aa13.34□□□□□ -0.27
USP6NL-202ENST00000379237 JARID2Q92833 1246 aaPredicted RBP13.34□□□□□ -0.27
USP6NL-202ENST00000379237 PLEKHH2Q8IVE3 1493 aa13.34□□□□□ -0.27
USP6NL-202ENST00000379237 ANKRD30AQ9BXX3 1397 aa13.33□□□□□ -0.28
USP6NL-202ENST00000379237 DDX19BQ9UMR2 479 aa13.32□□□□□ -0.28
USP6NL-202ENST00000379237 RPRD2Q5VT52 1461 aaKnown RBP13.32□□□□□ -0.28
USP6NL-202ENST00000379237 C17orf53Q8N3J3 647 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms