RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PBRM1Q86U86 1689 aa18.14■□□□□ 0.5
SHROOM1-203ENST00000378679 PLIN1O60240 522 aa18.14■□□□□ 0.49
SHROOM1-203ENST00000378679 IDI1Q13907 227 aa18.14■□□□□ 0.49
SHROOM1-203ENST00000378679 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.49
SHROOM1-203ENST00000378679 BRD4O60885 1362 aaPredicted RBP18.14■□□□□ 0.49
SHROOM1-203ENST00000378679 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
SHROOM1-203ENST00000378679 MTHFSP49914 203 aa18.13■□□□□ 0.49
SHROOM1-203ENST00000378679 DIAPH1O60610 1272 aaKnown RBP18.13■□□□□ 0.49
SHROOM1-203ENST00000378679 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
SHROOM1-203ENST00000378679 TRAPPC8Q9Y2L5 1435 aa18.12■□□□□ 0.49
SHROOM1-203ENST00000378679 BCL2L13Q9BXK5 485 aa18.12■□□□□ 0.49
SHROOM1-203ENST00000378679 DENND4BO75064 1496 aaPredicted RBP18.12■□□□□ 0.49
SHROOM1-203ENST00000378679 SLC26A8Q96RN1 970 aa18.12■□□□□ 0.49
SHROOM1-203ENST00000378679 CFAP43Q8NDM7 1665 aa18.12■□□□□ 0.49
SHROOM1-203ENST00000378679 ADGRF5Q8IZF2 1346 aa18.11■□□□□ 0.49
SHROOM1-203ENST00000378679 E9PSI1 815 aa18.1■□□□□ 0.49
SHROOM1-203ENST00000378679 ELL2O00472 640 aaPredicted RBP18.1■□□□□ 0.49
SHROOM1-203ENST00000378679 ITPRIPQ8IWB1 547 aa18.1■□□□□ 0.49
SHROOM1-203ENST00000378679 SYCP2Q9BX26 1530 aa18.1■□□□□ 0.49
SHROOM1-203ENST00000378679 SAMD9Q5K651 1589 aa18.1■□□□□ 0.49
SHROOM1-203ENST00000378679 PNISRQ8TF01 805 aaKnown RBP18.09■□□□□ 0.49
SHROOM1-203ENST00000378679 LMOD3Q0VAK6 560 aa18.09■□□□□ 0.49
SHROOM1-203ENST00000378679 THEMISQ8N1K5 641 aaPredicted RBP18.09■□□□□ 0.49
SHROOM1-203ENST00000378679 WDR7Q9Y4E6 1490 aa18.08■□□□□ 0.49
SHROOM1-203ENST00000378679 CEP170Q5SW79 1584 aa18.07■□□□□ 0.48
SHROOM1-203ENST00000378679 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
SHROOM1-203ENST00000378679 CABP1Q9NZU7 370 aa18.07■□□□□ 0.48
SHROOM1-203ENST00000378679 RRP1P56182 461 aaKnown RBP18.07■□□□□ 0.48
SHROOM1-203ENST00000378679 CDK19Q9BWU1 502 aa18.06■□□□□ 0.48
SHROOM1-203ENST00000378679 BECN1Q14457 450 aa18.06■□□□□ 0.48
SHROOM1-203ENST00000378679 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
SHROOM1-203ENST00000378679 EXOC6Q8TAG9 804 aa18.05■□□□□ 0.48
SHROOM1-203ENST00000378679 PSME1Q06323 249 aa18.05■□□□□ 0.48
SHROOM1-203ENST00000378679 NGEFQ8N5V2 710 aa18.04■□□□□ 0.48
SHROOM1-203ENST00000378679 CDCA7LQ96GN5 454 aa18.04■□□□□ 0.48
SHROOM1-203ENST00000378679 RIPK4P57078 832 aa18.04■□□□□ 0.48
SHROOM1-203ENST00000378679 HMOX1P09601 288 aa18.04■□□□□ 0.48
SHROOM1-203ENST00000378679 ABCC2Q92887 1545 aa18.03■□□□□ 0.48
SHROOM1-203ENST00000378679 STK31Q9BXU1 1019 aa18.03■□□□□ 0.48
SHROOM1-203ENST00000378679 APBB1O00213 710 aa18.02■□□□□ 0.48
SHROOM1-203ENST00000378679 RWDD1Q9H446 243 aaPredicted RBP18.02■□□□□ 0.48
SHROOM1-203ENST00000378679 MAGI3Q5TCQ9 1506 aa18.02■□□□□ 0.48
SHROOM1-203ENST00000378679 ITSN2Q9NZM3 1697 aa18.02■□□□□ 0.48
SHROOM1-203ENST00000378679 OS9Q13438 667 aaPredicted RBP18.02■□□□□ 0.47
SHROOM1-203ENST00000378679 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.47
SHROOM1-203ENST00000378679 PMFBP1Q8TBY8 1022 aa18.01■□□□□ 0.47
SHROOM1-203ENST00000378679 KDM5BQ9UGL1 1544 aa18.01■□□□□ 0.47
SHROOM1-203ENST00000378679 CEBPAP49715 358 aaPredicted RBP18.01■□□□□ 0.47
SHROOM1-203ENST00000378679 NLRP6P59044 892 aa18.01■□□□□ 0.47
SHROOM1-203ENST00000378679 TCP11L2Q8N4U5 519 aa18.01■□□□□ 0.47
SHROOM1-203ENST00000378679 WAPLQ7Z5K2 1190 aa18■□□□□ 0.47
SHROOM1-203ENST00000378679 CRBNQ96SW2 442 aa17.99■□□□□ 0.47
SHROOM1-203ENST00000378679 POGZQ7Z3K3 1410 aa17.98■□□□□ 0.47
SHROOM1-203ENST00000378679 COG6Q9Y2V7 657 aa17.98■□□□□ 0.47
SHROOM1-203ENST00000378679 TCERG1O14776 1098 aaKnown RBP17.98■□□□□ 0.47
SHROOM1-203ENST00000378679 CASC1Q6TDU7 716 aa17.98■□□□□ 0.47
SHROOM1-203ENST00000378679 SLC4A10Q6U841 1118 aa17.98■□□□□ 0.47
SHROOM1-203ENST00000378679 DUOX2Q9NRD8 1548 aa17.97■□□□□ 0.47
SHROOM1-203ENST00000378679 A2MP01023 1474 aa17.97■□□□□ 0.47
SHROOM1-203ENST00000378679 NOS1P29475 1434 aa17.96■□□□□ 0.47
SHROOM1-203ENST00000378679 ZNF518AQ6AHZ1 1483 aa17.95■□□□□ 0.46
SHROOM1-203ENST00000378679 RTEL1-TNFRSF6BF6WH68 1400 aa17.95■□□□□ 0.46
SHROOM1-203ENST00000378679 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
SHROOM1-203ENST00000378679 C14orf93Q9H972 538 aaKnown RBP17.94■□□□□ 0.46
SHROOM1-203ENST00000378679 ANKLE2Q86XL3 938 aa17.94■□□□□ 0.46
SHROOM1-203ENST00000378679 CHMP4AQ9BY43 222 aa17.93■□□□□ 0.46
SHROOM1-203ENST00000378679 CCDC61Q9Y6R9 512 aa17.93■□□□□ 0.46
SHROOM1-203ENST00000378679 FAM135AQ9P2D6 1515 aa17.93■□□□□ 0.46
SHROOM1-203ENST00000378679 ATF3P18847 181 aa17.93■□□□□ 0.46
SHROOM1-203ENST00000378679 ZNF330Q9Y3S2 320 aaPredicted RBP17.93■□□□□ 0.46
SHROOM1-203ENST00000378679 SHANK2Q9UPX8 1470 aa17.92■□□□□ 0.46
SHROOM1-203ENST00000378679 PROSER2Q86WR7 435 aaPredicted RBP17.92■□□□□ 0.46
SHROOM1-203ENST00000378679 ATAD2Q6PL18 1390 aa17.92■□□□□ 0.46
SHROOM1-203ENST00000378679 ABTB2Q8N961 1025 aa17.92■□□□□ 0.46
SHROOM1-203ENST00000378679 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
SHROOM1-203ENST00000378679 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
SHROOM1-203ENST00000378679 ZNF692Q9BU19 519 aaPredicted RBP17.91■□□□□ 0.46
SHROOM1-203ENST00000378679 PZPP20742 1482 aa17.91■□□□□ 0.46
SHROOM1-203ENST00000378679 PRKAR2BP31323 418 aa17.91■□□□□ 0.46
SHROOM1-203ENST00000378679 TEFQ10587 303 aa17.9■□□□□ 0.46
SHROOM1-203ENST00000378679 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
SHROOM1-203ENST00000378679 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
SHROOM1-203ENST00000378679 NUDT16Q96DE0 195 aaKnown RBP17.9■□□□□ 0.46
SHROOM1-203ENST00000378679 NSD3Q9BZ95 1437 aa17.89■□□□□ 0.45
SHROOM1-203ENST00000378679 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
SHROOM1-203ENST00000378679 SCAF11Q99590 1463 aaKnown RBP17.88■□□□□ 0.45
SHROOM1-203ENST00000378679 ANO8Q9HCE9 1232 aaPredicted RBP17.88■□□□□ 0.45
SHROOM1-203ENST00000378679 C1orf141Q5JVX7 400 aa17.87■□□□□ 0.45
SHROOM1-203ENST00000378679 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
SHROOM1-203ENST00000378679 CENPQQ7L2Z9 268 aaPredicted RBP17.86■□□□□ 0.45
SHROOM1-203ENST00000378679 MSH5O43196 834 aa17.86■□□□□ 0.45
SHROOM1-203ENST00000378679 GNAI1P63096 354 aa17.86■□□□□ 0.45
SHROOM1-203ENST00000378679 PRAG1Q86YV5 1406 aa17.86■□□□□ 0.45
SHROOM1-203ENST00000378679 ADGRL2O95490 1459 aa17.86■□□□□ 0.45
SHROOM1-203ENST00000378679 DZIP1LQ8IYY4 767 aaKnown RBP17.85■□□□□ 0.45
SHROOM1-203ENST00000378679 RRS1Q15050 365 aaKnown RBP17.83■□□□□ 0.45
SHROOM1-203ENST00000378679 NECTIN2Q92692 538 aa17.83■□□□□ 0.45
SHROOM1-203ENST00000378679 GPRASP1Q5JY77 1395 aa17.83■□□□□ 0.45
SHROOM1-203ENST00000378679 PANK1Q8TE04 598 aa17.83■□□□□ 0.45
SHROOM1-203ENST00000378679 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms