RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 XIRP1Q702N8 1843 aaKnown RBP25.72■■□□□ 1.71
RER1-202ENST00000378512 MYO5BQ9ULV0 1848 aa25.7■■□□□ 1.71
RER1-202ENST00000378512 SLC26A8Q96RN1 970 aa25.7■■□□□ 1.7
RER1-202ENST00000378512 TMEM131LA2VDJ0 1609 aa25.69■■□□□ 1.7
RER1-202ENST00000378512 SPHKAPQ2M3C7 1700 aa25.68■■□□□ 1.7
RER1-202ENST00000378512 ZFYVE9O95405 1425 aa25.64■■□□□ 1.7
RER1-202ENST00000378512 RBM33Q96EV2 1170 aaKnown RBP25.63■■□□□ 1.69
RER1-202ENST00000378512 MED1Q15648 1581 aaPredicted RBP25.61■■□□□ 1.69
RER1-202ENST00000378512 RIMS2Q9UQ26 1411 aa25.61■■□□□ 1.69
RER1-202ENST00000378512 TMEM94Q12767 1356 aa25.6■■□□□ 1.69
RER1-202ENST00000378512 KCNA6P17658 529 aa25.59■■□□□ 1.69
RER1-202ENST00000378512 BCANQ96GW7 911 aa25.59■■□□□ 1.69
RER1-202ENST00000378512 CHGAP10645 457 aaKnown RBP25.58■■□□□ 1.69
RER1-202ENST00000378512 SOCS7O14512 581 aa25.56■■□□□ 1.68
RER1-202ENST00000378512 NUTM2DQ5VT03 806 aaPredicted RBP25.56■■□□□ 1.68
RER1-202ENST00000378512 TRPM2O94759 1503 aa25.56■■□□□ 1.68
RER1-202ENST00000378512 NWD1Q149M9 1564 aa25.56■■□□□ 1.68
RER1-202ENST00000378512 PLEKHG1Q9ULL1 1385 aa25.55■■□□□ 1.68
RER1-202ENST00000378512 PPP1R15AO75807 674 aaPredicted RBP25.54■■□□□ 1.68
RER1-202ENST00000378512 PROSER2Q86WR7 435 aaPredicted RBP25.54■■□□□ 1.68
RER1-202ENST00000378512 CLTCL1P53675 1640 aa25.53■■□□□ 1.68
RER1-202ENST00000378512 NKTRP30414 1462 aaKnown RBP25.5■■□□□ 1.67
RER1-202ENST00000378512 TRIM52Q96A61 297 aa25.49■■□□□ 1.67
RER1-202ENST00000378512 SETD5Q9C0A6 1442 aa25.49■■□□□ 1.67
RER1-202ENST00000378512 CHD2O14647 1828 aaKnown RBP25.48■■□□□ 1.67
RER1-202ENST00000378512 ACIN1Q9UKV3 1341 aaKnown RBP25.48■■□□□ 1.67
RER1-202ENST00000378512 ADAMTS13Q76LX8 1427 aa25.47■■□□□ 1.67
RER1-202ENST00000378512 KIF1BO60333 1816 aa25.47■■□□□ 1.67
RER1-202ENST00000378512 SLC4A1APQ9BWU0 796 aaKnown RBP25.46■■□□□ 1.67
RER1-202ENST00000378512 HDGFP51858 240 aaKnown RBP25.44■■□□□ 1.66
RER1-202ENST00000378512 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.44■■□□□ 1.66
RER1-202ENST00000378512 FAM135BQ49AJ0 1406 aa25.43■■□□□ 1.66
RER1-202ENST00000378512 ROBO1Q9Y6N7 1651 aa25.43■■□□□ 1.66
RER1-202ENST00000378512 TBX22Q9Y458 520 aa25.43■■□□□ 1.66
RER1-202ENST00000378512 RAB3GAP2Q9H2M9 1393 aa25.4■■□□□ 1.66
RER1-202ENST00000378512 MSH6P52701 1360 aa25.39■■□□□ 1.65
RER1-202ENST00000378512 MPHOSPH9Q99550 1183 aa25.38■■□□□ 1.65
RER1-202ENST00000378512 NEXMIFQ5QGS0 1516 aa25.38■■□□□ 1.65
RER1-202ENST00000378512 DIP2AQ14689 1571 aa25.38■■□□□ 1.65
RER1-202ENST00000378512 NRXN3Q9Y4C0 1643 aa25.37■■□□□ 1.65
RER1-202ENST00000378512 PTPRUQ92729 1446 aa25.37■■□□□ 1.65
RER1-202ENST00000378512 PHF23Q9BUL5 403 aaPredicted RBP25.36■■□□□ 1.65
RER1-202ENST00000378512 SETBP1Q9Y6X0 1596 aa25.34■■□□□ 1.65
RER1-202ENST00000378512 HRCP23327 699 aa25.33■■□□□ 1.65
RER1-202ENST00000378512 SLAIN2Q9P270 581 aa25.33■■□□□ 1.65
RER1-202ENST00000378512 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
RER1-202ENST00000378512 FOXD1Q16676 465 aa25.31■■□□□ 1.64
RER1-202ENST00000378512 PPLO60437 1756 aa25.3■■□□□ 1.64
RER1-202ENST00000378512 PIK3R4Q99570 1358 aa25.3■■□□□ 1.64
RER1-202ENST00000378512 AMOTL2Q9Y2J4 779 aa25.29■■□□□ 1.64
RER1-202ENST00000378512 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.29■■□□□ 1.64
RER1-202ENST00000378512 C14orf37Q86TY3 774 aa25.29■■□□□ 1.64
RER1-202ENST00000378512 RGS17Q9UGC6 210 aaPredicted RBP25.29■■□□□ 1.64
RER1-202ENST00000378512 CCDC144AA2RUR9 1427 aa25.27■■□□□ 1.64
RER1-202ENST00000378512 METP08581 1390 aa25.26■■□□□ 1.63
RER1-202ENST00000378512 PHLPP1O60346 1717 aa25.26■■□□□ 1.63
RER1-202ENST00000378512 XRN1Q8IZH2 1706 aaKnown RBP25.26■■□□□ 1.63
RER1-202ENST00000378512 SPATA31E1Q6ZUB1 1445 aa25.26■■□□□ 1.63
RER1-202ENST00000378512 NCOA3Q9Y6Q9 1424 aa25.26■■□□□ 1.63
RER1-202ENST00000378512 IFT172Q9UG01 1749 aa25.26■■□□□ 1.63
RER1-202ENST00000378512 RPGRIP1LQ68CZ1 1315 aa25.24■■□□□ 1.63
RER1-202ENST00000378512 SETD1AO15047 1707 aaKnown RBP25.24■■□□□ 1.63
RER1-202ENST00000378512 C19orf44Q9H6X5 657 aa25.21■■□□□ 1.63
RER1-202ENST00000378512 COL16A1Q07092 1604 aaPredicted RBP25.21■■□□□ 1.63
RER1-202ENST00000378512 VGFO15240 615 aaPredicted RBP25.18■■□□□ 1.62
RER1-202ENST00000378512 ATF3P18847 181 aa25.18■■□□□ 1.62
RER1-202ENST00000378512 CADPS2Q86UW7 1296 aa25.18■■□□□ 1.62
RER1-202ENST00000378512 ANKRD30BQ9BXX2 1392 aa25.16■■□□□ 1.62
RER1-202ENST00000378512 POTEAQ6S8J7 498 aa25.13■■□□□ 1.61
RER1-202ENST00000378512 JCADQ9P266 1359 aa25.13■■□□□ 1.61
RER1-202ENST00000378512 AHDC1Q5TGY3 1603 aaPredicted RBP25.13■■□□□ 1.61
RER1-202ENST00000378512 BRINP3Q76B58 766 aa25.12■■□□□ 1.61
RER1-202ENST00000378512 NALCNQ8IZF0 1738 aa25.11■■□□□ 1.61
RER1-202ENST00000378512 PRAG1Q86YV5 1406 aa25.11■■□□□ 1.61
RER1-202ENST00000378512 LRP6O75581 1613 aa25.1■■□□□ 1.61
RER1-202ENST00000378512 DCCP43146 1447 aa25.1■■□□□ 1.61
RER1-202ENST00000378512 MST1RQ04912 1400 aa25.1■■□□□ 1.61
RER1-202ENST00000378512 ASXL1Q8IXJ9 1541 aa25.07■■□□□ 1.6
RER1-202ENST00000378512 ADGRL3Q9HAR2 1447 aa25.07■■□□□ 1.6
RER1-202ENST00000378512 RGL3Q3MIN7 710 aa25.06■■□□□ 1.6
RER1-202ENST00000378512 NRXN1Q9ULB1 1477 aa25.06■■□□□ 1.6
RER1-202ENST00000378512 ROBO2Q9HCK4 1378 aa25.06■■□□□ 1.6
RER1-202ENST00000378512 ADGRF5Q8IZF2 1346 aa25.05■■□□□ 1.6
RER1-202ENST00000378512 PIK3C2GO75747 1445 aa25.05■■□□□ 1.6
RER1-202ENST00000378512 MYOM2P54296 1465 aa25.04■■□□□ 1.6
RER1-202ENST00000378512 DDX17Q92841 729 aaKnown RBP25.03■■□□□ 1.6
RER1-202ENST00000378512 SHPRHQ149N8 1683 aa25.03■■□□□ 1.6
RER1-202ENST00000378512 PTCH1Q13635 1447 aa25.02■■□□□ 1.6
RER1-202ENST00000378512 NHSL1Q5SYE7 1610 aa25.01■■□□□ 1.59
RER1-202ENST00000378512 SPATA31A6Q5VVP1 1343 aa24.99■■□□□ 1.59
RER1-202ENST00000378512 LAMC1P11047 1609 aa24.98■■□□□ 1.59
RER1-202ENST00000378512 KNDC1Q76NI1 1749 aa24.97■■□□□ 1.59
RER1-202ENST00000378512 C1orf167Q5SNV9 1468 aa24.96■■□□□ 1.59
RER1-202ENST00000378512 NUTM2BA6NNL0 878 aaPredicted RBP24.95■■□□□ 1.58
RER1-202ENST00000378512 NUTM2EB1AL46 878 aaPredicted RBP24.95■■□□□ 1.58
RER1-202ENST00000378512 TECPR2O15040 1411 aa24.95■■□□□ 1.58
RER1-202ENST00000378512 NUTM2AQ8IVF1 878 aaPredicted RBP24.95■■□□□ 1.58
RER1-202ENST00000378512 MEX3CQ5U5Q3 659 aaKnown RBP24.94■■□□□ 1.58
RER1-202ENST00000378512 ORAI2Q96SN7 254 aa24.92■■□□□ 1.58
RER1-202ENST00000378512 C14orf93Q9H972 538 aaKnown RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms