RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 AMOTL1Q8IY63 956 aa23.31■■□□□ 1.32
TBC1D4-201ENST00000377625 PRKRIP1Q9H875 184 aaPredicted RBP23.31■■□□□ 1.32
TBC1D4-201ENST00000377625 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.31■■□□□ 1.32
TBC1D4-201ENST00000377625 DIAPH1O60610 1272 aaKnown RBP23.3■■□□□ 1.32
TBC1D4-201ENST00000377625 SLC4A3P48751 1232 aa23.3■■□□□ 1.32
TBC1D4-201ENST00000377625 USP47Q96K76 1375 aa23.3■■□□□ 1.32
TBC1D4-201ENST00000377625 TPM2P07951 284 aa23.3■■□□□ 1.32
TBC1D4-201ENST00000377625 RAD21O60216 631 aa23.29■■□□□ 1.32
TBC1D4-201ENST00000377625 NECTIN2Q92692 538 aa23.29■■□□□ 1.32
TBC1D4-201ENST00000377625 ZKSCAN1P17029 563 aaPredicted RBP23.29■■□□□ 1.32
TBC1D4-201ENST00000377625 ANO8Q9HCE9 1232 aaPredicted RBP23.29■■□□□ 1.32
TBC1D4-201ENST00000377625 SKOR2Q2VWA4 1001 aaPredicted RBP23.28■■□□□ 1.32
TBC1D4-201ENST00000377625 IFIT2P09913 472 aaKnown RBP23.28■■□□□ 1.32
TBC1D4-201ENST00000377625 TPM1P09493 284 aa23.28■■□□□ 1.32
TBC1D4-201ENST00000377625 TRIM34Q9BYJ4 488 aa23.28■■□□□ 1.32
TBC1D4-201ENST00000377625 DDX19BQ9UMR2 479 aa23.28■■□□□ 1.32
TBC1D4-201ENST00000377625 REC8O95072 547 aa23.28■■□□□ 1.32
TBC1D4-201ENST00000377625 TRIM29Q14134 588 aa23.27■■□□□ 1.32
TBC1D4-201ENST00000377625 APPP05067 770 aa23.27■■□□□ 1.32
TBC1D4-201ENST00000377625 RIPK4P57078 832 aa23.26■■□□□ 1.31
TBC1D4-201ENST00000377625 CCAR2Q8N163 923 aaKnown RBP23.26■■□□□ 1.31
TBC1D4-201ENST00000377625 ANO2Q9NQ90 1003 aa23.25■■□□□ 1.31
TBC1D4-201ENST00000377625 TCEAL9Q9UHQ7 104 aa23.25■■□□□ 1.31
TBC1D4-201ENST00000377625 API5Q9BZZ5 524 aaKnown RBP23.25■■□□□ 1.31
TBC1D4-201ENST00000377625 DDX58O95786 925 aaKnown RBP23.25■■□□□ 1.31
TBC1D4-201ENST00000377625 SYTL4Q96C24 671 aaPredicted RBP23.25■■□□□ 1.31
TBC1D4-201ENST00000377625 PTPRGP23470 1445 aa23.24■■□□□ 1.31
TBC1D4-201ENST00000377625 ZBED9Q6R2W3 1325 aa23.24■■□□□ 1.31
TBC1D4-201ENST00000377625 DHX57Q6P158 1386 aaKnown RBP23.24■■□□□ 1.31
TBC1D4-201ENST00000377625 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
TBC1D4-201ENST00000377625 PSME1Q06323 249 aa23.24■■□□□ 1.31
TBC1D4-201ENST00000377625 CPLX1O14810 134 aa23.23■■□□□ 1.31
TBC1D4-201ENST00000377625 CTDP1Q9Y5B0 961 aaPredicted RBP23.23■■□□□ 1.31
TBC1D4-201ENST00000377625 VPS37DQ86XT2 251 aa23.23■■□□□ 1.31
TBC1D4-201ENST00000377625 DZIP1LQ8IYY4 767 aaKnown RBP23.22■■□□□ 1.31
TBC1D4-201ENST00000377625 FKBP5Q13451 457 aaPredicted RBP23.22■■□□□ 1.31
TBC1D4-201ENST00000377625 WWC1Q8IX03 1113 aa23.21■■□□□ 1.31
TBC1D4-201ENST00000377625 G3BP1Q13283 466 aaKnown RBP eCLIP23.21■■□□□ 1.311e-6■■□□□ 14.5
TBC1D4-201ENST00000377625 DHX16O60231 1041 aaKnown RBP23.2■■□□□ 1.31
TBC1D4-201ENST00000377625 TRDNQ13061 729 aa23.2■■□□□ 1.3
TBC1D4-201ENST00000377625 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
TBC1D4-201ENST00000377625 PCMTD1Q96MG8 357 aaPredicted RBP23.19■■□□□ 1.3
TBC1D4-201ENST00000377625 ROCK1Q13464 1354 aa23.19■■□□□ 1.3
TBC1D4-201ENST00000377625 RNF20Q5VTR2 975 aa23.19■■□□□ 1.3
TBC1D4-201ENST00000377625 CCDC47Q96A33 483 aaKnown RBP23.18■■□□□ 1.3
TBC1D4-201ENST00000377625 CCDC70Q6NSX1 233 aa23.17■■□□□ 1.3
TBC1D4-201ENST00000377625 FBXW7Q969H0 707 aa23.16■■□□□ 1.3
TBC1D4-201ENST00000377625 WIZO95785 1651 aa23.15■■□□□ 1.3
TBC1D4-201ENST00000377625 NFXL1Q6ZNB6 911 aa23.15■■□□□ 1.3
TBC1D4-201ENST00000377625 IPO7O95373 1038 aaKnown RBP23.15■■□□□ 1.3
TBC1D4-201ENST00000377625 GSE1Q14687 1217 aa23.15■■□□□ 1.3
TBC1D4-201ENST00000377625 ANKRD20A12PQ8NF67 263 aa23.15■■□□□ 1.3
TBC1D4-201ENST00000377625 BICD2Q8TD16 824 aa23.15■■□□□ 1.3
TBC1D4-201ENST00000377625 RUNDC1Q96C34 613 aa23.15■■□□□ 1.3
TBC1D4-201ENST00000377625 TSPYL4Q9UJ04 414 aa23.14■■□□□ 1.3
TBC1D4-201ENST00000377625 ZNF592Q92610 1267 aa23.13■■□□□ 1.29
TBC1D4-201ENST00000377625 ERICH2A1L162 156 aa23.13■■□□□ 1.29
TBC1D4-201ENST00000377625 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.12■■□□□ 1.29
TBC1D4-201ENST00000377625 HOOK1Q9UJC3 728 aaKnown RBP23.12■■□□□ 1.29
TBC1D4-201ENST00000377625 GNAI1P63096 354 aa23.12■■□□□ 1.29
TBC1D4-201ENST00000377625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.11■■□□□ 1.29
TBC1D4-201ENST00000377625 MEX3CQ5U5Q3 659 aaKnown RBP23.11■■□□□ 1.29
TBC1D4-201ENST00000377625 HSP90AB4PQ58FF6 505 aa23.11■■□□□ 1.29
TBC1D4-201ENST00000377625 RAPGEF4Q8WZA2 1011 aa23.1■■□□□ 1.29
TBC1D4-201ENST00000377625 VPS37CA5D8V6 355 aaPredicted RBP23.1■■□□□ 1.29
TBC1D4-201ENST00000377625 INTS3Q68E01 1043 aaKnown RBP23.1■■□□□ 1.29
TBC1D4-201ENST00000377625 GPS2Q13227 327 aa23.1■■□□□ 1.29
TBC1D4-201ENST00000377625 HMOX1P09601 288 aa23.09■■□□□ 1.29
TBC1D4-201ENST00000377625 ERC2O15083 957 aa23.09■■□□□ 1.29
TBC1D4-201ENST00000377625 SMC3Q9UQE7 1217 aa23.09■■□□□ 1.29
TBC1D4-201ENST00000377625 CHMP5Q9NZZ3 219 aa23.07■■□□□ 1.28
TBC1D4-201ENST00000377625 HSP90AA2PQ14568 343 aaPredicted RBP23.07■■□□□ 1.28
TBC1D4-201ENST00000377625 RIC3Q7Z5B4 369 aa23.07■■□□□ 1.28
TBC1D4-201ENST00000377625 NEUROD6Q96NK8 337 aa23.06■■□□□ 1.28
TBC1D4-201ENST00000377625 LNPKQ9C0E8 428 aa23.06■■□□□ 1.28
TBC1D4-201ENST00000377625 AIMP1Q12904 312 aaKnown RBP23.05■■□□□ 1.28
TBC1D4-201ENST00000377625 RBM33Q96EV2 1170 aaKnown RBP23.05■■□□□ 1.28
TBC1D4-201ENST00000377625 CCDC43Q96MW1 224 aaKnown RBP23.05■■□□□ 1.28
TBC1D4-201ENST00000377625 FOSBP53539 338 aa23.05■■□□□ 1.28
TBC1D4-201ENST00000377625 SAFBQ15424 915 aaKnown RBP eCLIP23.04■■□□□ 1.28
TBC1D4-201ENST00000377625 SETQ01105 290 aaPredicted RBP23.04■■□□□ 1.28
TBC1D4-201ENST00000377625 HOMER1Q86YM7 354 aa23.04■■□□□ 1.28
TBC1D4-201ENST00000377625 OSCARQ8IYS5 282 aa23.04■■□□□ 1.28
TBC1D4-201ENST00000377625 ATF3P18847 181 aa23.03■■□□□ 1.28
TBC1D4-201ENST00000377625 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
TBC1D4-201ENST00000377625 GGNBP2Q9H3C7 697 aa23.03■■□□□ 1.28
TBC1D4-201ENST00000377625 NLRP2Q9NX02 1062 aa23.03■■□□□ 1.28
TBC1D4-201ENST00000377625 RALYLQ86SE5 291 aaKnown RBP23.03■■□□□ 1.28
TBC1D4-201ENST00000377625 SASS6Q6UVJ0 657 aa23.02■■□□□ 1.28
TBC1D4-201ENST00000377625 MYOM3Q5VTT5 1437 aa23.02■■□□□ 1.28
TBC1D4-201ENST00000377625 WASHC4Q2M389 1173 aa23.02■■□□□ 1.28
TBC1D4-201ENST00000377625 NUCB2P80303 420 aa23.01■■□□□ 1.27
TBC1D4-201ENST00000377625 RSPH6AQ9H0K4 717 aa23.01■■□□□ 1.27
TBC1D4-201ENST00000377625 SAMD1Q6SPF0 538 aaPredicted RBP23.01■■□□□ 1.27
TBC1D4-201ENST00000377625 CCDC73Q6ZRK6 1079 aa23■■□□□ 1.27
TBC1D4-201ENST00000377625 NUTM2GQ5VZR2 741 aa23■■□□□ 1.27
TBC1D4-201ENST00000377625 MIA2Q96PC5 1412 aa23■■□□□ 1.27
TBC1D4-201ENST00000377625 UBTFL1P0CB47 393 aaPredicted RBP23■■□□□ 1.27
TBC1D4-201ENST00000377625 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
TBC1D4-201ENST00000377625 CWC22Q9HCG8 908 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms