RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 RTL5Q5HYW3 569 aaPredicted RBP26.77■■□□□ 1.88
CLN5-201ENST00000377453 KIF3BO15066 747 aa26.77■■□□□ 1.88
CLN5-201ENST00000377453 CLTCL1P53675 1640 aa26.75■■□□□ 1.87
CLN5-201ENST00000377453 MS4A1P11836 297 aa26.74■■□□□ 1.87
CLN5-201ENST00000377453 UGGT1Q9NYU2 1555 aa26.74■■□□□ 1.87
CLN5-201ENST00000377453 SCAF11Q99590 1463 aaKnown RBP26.74■■□□□ 1.87
CLN5-201ENST00000377453 APAF1O14727 1248 aa26.73■■□□□ 1.87
CLN5-201ENST00000377453 GOLGA2Q08379 1002 aa26.73■■□□□ 1.87
CLN5-201ENST00000377453 SLC4A3P48751 1232 aa26.73■■□□□ 1.87
CLN5-201ENST00000377453 DMRT2Q9Y5R5 561 aa26.73■■□□□ 1.87
CLN5-201ENST00000377453 IQGAP1P46940 1657 aa26.73■■□□□ 1.87
CLN5-201ENST00000377453 ADGRF5Q8IZF2 1346 aa26.72■■□□□ 1.87
CLN5-201ENST00000377453 ZNF521Q96K83 1311 aa26.72■■□□□ 1.87
CLN5-201ENST00000377453 INSRP06213 1382 aa26.7■■□□□ 1.86
CLN5-201ENST00000377453 TRPM2O94759 1503 aa26.7■■□□□ 1.86
CLN5-201ENST00000377453 KDM2BQ8NHM5 1336 aa26.69■■□□□ 1.86
CLN5-201ENST00000377453 BCAR3O75815 825 aa26.69■■□□□ 1.86
CLN5-201ENST00000377453 CARD14Q9BXL6 1004 aa26.69■■□□□ 1.86
CLN5-201ENST00000377453 ZFYVE16Q7Z3T8 1539 aa26.68■■□□□ 1.86
CLN5-201ENST00000377453 ASXL1Q8IXJ9 1541 aa26.68■■□□□ 1.86
CLN5-201ENST00000377453 OSCARQ8IYS5 282 aa26.68■■□□□ 1.86
CLN5-201ENST00000377453 SLFN5Q08AF3 891 aa26.67■■□□□ 1.86
CLN5-201ENST00000377453 NEFMP07197 916 aa26.67■■□□□ 1.86
CLN5-201ENST00000377453 RGS3P49796 1198 aa26.66■■□□□ 1.86
CLN5-201ENST00000377453 CDCA8Q53HL2 280 aa26.66■■□□□ 1.86
CLN5-201ENST00000377453 PTPRTO14522 1441 aa26.66■■□□□ 1.86
CLN5-201ENST00000377453 SCAPERQ9BY12 1400 aa26.66■■□□□ 1.86
CLN5-201ENST00000377453 TNNT2P45379 298 aaPredicted RBP26.66■■□□□ 1.86
CLN5-201ENST00000377453 SPHKAPQ2M3C7 1700 aa26.65■■□□□ 1.86
CLN5-201ENST00000377453 CHGAP10645 457 aaKnown RBP26.64■■□□□ 1.86
CLN5-201ENST00000377453 SYNMO15061 1565 aa26.64■■□□□ 1.86
CLN5-201ENST00000377453 MYOM1P52179 1685 aa26.63■■□□□ 1.85
CLN5-201ENST00000377453 CEP152O94986 1710 aa26.61■■□□□ 1.85
CLN5-201ENST00000377453 UHRF1BP1LA0JNW5 1464 aa26.61■■□□□ 1.85
CLN5-201ENST00000377453 SENP3Q9H4L4 574 aaPredicted RBP26.6■■□□□ 1.85
CLN5-201ENST00000377453 PIK3C2GO75747 1445 aa26.59■■□□□ 1.85
CLN5-201ENST00000377453 NEUROD2Q15784 382 aa26.59■■□□□ 1.85
CLN5-201ENST00000377453 CENPQQ7L2Z9 268 aaPredicted RBP26.58■■□□□ 1.85
CLN5-201ENST00000377453 ERVK-7P63135 1459 aa26.58■■□□□ 1.85
CLN5-201ENST00000377453 KANK1Q14678 1352 aa26.58■■□□□ 1.85
CLN5-201ENST00000377453 RRP7AQ9Y3A4 280 aaKnown RBP26.57■■□□□ 1.84
CLN5-201ENST00000377453 EIF3AQ14152 1382 aaKnown RBP26.57■■□□□ 1.84
CLN5-201ENST00000377453 RTEL1-TNFRSF6BF6WH68 1400 aa26.57■■□□□ 1.84
CLN5-201ENST00000377453 FANCAO15360 1455 aa26.56■■□□□ 1.84
CLN5-201ENST00000377453 ATP7AQ04656 1500 aa26.55■■□□□ 1.84
CLN5-201ENST00000377453 TRAK1Q9UPV9 953 aa26.55■■□□□ 1.84
CLN5-201ENST00000377453 C8orf34Q49A92 452 aa26.54■■□□□ 1.84
CLN5-201ENST00000377453 TRMT2AQ8IZ69 625 aaKnown RBP26.54■■□□□ 1.84
CLN5-201ENST00000377453 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.52■■□□□ 1.84
CLN5-201ENST00000377453 TET3O43151 1660 aa26.52■■□□□ 1.84
CLN5-201ENST00000377453 TMEM132EQ6IEE7 984 aa26.52■■□□□ 1.84
CLN5-201ENST00000377453 ABCA6Q8N139 1617 aa26.52■■□□□ 1.84
CLN5-201ENST00000377453 NUTM2DQ5VT03 806 aaPredicted RBP26.52■■□□□ 1.84
CLN5-201ENST00000377453 KDM5AP29375 1690 aaKnown RBP26.51■■□□□ 1.83
CLN5-201ENST00000377453 SLC12A5Q9H2X9 1139 aa26.51■■□□□ 1.83
CLN5-201ENST00000377453 DEPDC5O75140 1603 aa26.5■■□□□ 1.83
CLN5-201ENST00000377453 IGHDP01880 384 aa26.5■■□□□ 1.83
CLN5-201ENST00000377453 PANK1Q8TE04 598 aa26.5■■□□□ 1.83
CLN5-201ENST00000377453 ADGRL1O94910 1474 aa26.49■■□□□ 1.83
CLN5-201ENST00000377453 NKTRP30414 1462 aaKnown RBP26.48■■□□□ 1.83
CLN5-201ENST00000377453 FAM161AQ3B820 660 aa26.48■■□□□ 1.83
CLN5-201ENST00000377453 NPC1L1Q9UHC9 1359 aa26.47■■□□□ 1.83
CLN5-201ENST00000377453 NOS1P29475 1434 aa26.47■■□□□ 1.83
CLN5-201ENST00000377453 ASXL2Q76L83 1435 aa26.47■■□□□ 1.83
CLN5-201ENST00000377453 COG6Q9Y2V7 657 aa26.46■■□□□ 1.83
CLN5-201ENST00000377453 E9PSI1 815 aa26.46■■□□□ 1.83
CLN5-201ENST00000377453 TNNQ9UQP3 1299 aa26.46■■□□□ 1.83
CLN5-201ENST00000377453 MROH1Q8NDA8 1641 aa26.45■■□□□ 1.83
CLN5-201ENST00000377453 MAP3K4Q9Y6R4 1608 aa26.45■■□□□ 1.83
CLN5-201ENST00000377453 VWDEQ8N2E2 1590 aa26.45■■□□□ 1.82
CLN5-201ENST00000377453 INO80Q9ULG1 1556 aaPredicted RBP26.45■■□□□ 1.82
CLN5-201ENST00000377453 FRAT1Q92837 279 aaPredicted RBP26.45■■□□□ 1.82
CLN5-201ENST00000377453 STAC3Q96MF2 364 aa26.45■■□□□ 1.82
CLN5-201ENST00000377453 IL27Q8NEV9 243 aa26.44■■□□□ 1.82
CLN5-201ENST00000377453 DDRGK1Q96HY6 314 aa26.44■■□□□ 1.82
CLN5-201ENST00000377453 WWC1Q8IX03 1113 aa26.44■■□□□ 1.82
CLN5-201ENST00000377453 MROH2AA6NES4 1674 aa26.44■■□□□ 1.82
CLN5-201ENST00000377453 GGT6Q6P531 493 aa26.43■■□□□ 1.82
CLN5-201ENST00000377453 BCL2L13Q9BXK5 485 aa26.43■■□□□ 1.82
CLN5-201ENST00000377453 NSD3Q9BZ95 1437 aa26.43■■□□□ 1.82
CLN5-201ENST00000377453 MORC1Q86VD1 984 aa26.43■■□□□ 1.82
CLN5-201ENST00000377453 CENPJQ9HC77 1338 aaPredicted RBP26.43■■□□□ 1.82
CLN5-201ENST00000377453 CANXP27824 592 aaKnown RBP26.42■■□□□ 1.82
CLN5-201ENST00000377453 NPM1P06748 294 aaKnown RBP eCLIP26.41■■□□□ 1.82
CLN5-201ENST00000377453 CFAP65Q6ZU64 1925 aaKnown RBP26.41■■□□□ 1.82
CLN5-201ENST00000377453 RTN4Q9NQC3 1192 aaKnown RBP26.4■■□□□ 1.82
CLN5-201ENST00000377453 PPM1GO15355 546 aaPredicted RBP26.4■■□□□ 1.82
CLN5-201ENST00000377453 ABCA9Q8IUA7 1624 aa26.38■■□□□ 1.81
CLN5-201ENST00000377453 MYOM2P54296 1465 aa26.38■■□□□ 1.81
CLN5-201ENST00000377453 NFKBIBQ15653 356 aa26.38■■□□□ 1.81
CLN5-201ENST00000377453 SAFB2Q14151 953 aaKnown RBP eCLIP26.37■■□□□ 1.81
CLN5-201ENST00000377453 DAXXQ9UER7 740 aaPredicted RBP26.37■■□□□ 1.81
CLN5-201ENST00000377453 PPRC1Q5VV67 1664 aaKnown RBP26.36■■□□□ 1.81
CLN5-201ENST00000377453 ARAP3Q8WWN8 1544 aa26.36■■□□□ 1.81
CLN5-201ENST00000377453 TCP11L2Q8N4U5 519 aa26.35■■□□□ 1.81
CLN5-201ENST00000377453 EFCAB6Q5THR3 1501 aa26.35■■□□□ 1.81
CLN5-201ENST00000377453 SEC24BO95487 1268 aa26.35■■□□□ 1.81
CLN5-201ENST00000377453 KIAA1210Q9ULL0 1709 aa26.34■■□□□ 1.81
CLN5-201ENST00000377453 MTHFSP49914 203 aa26.34■■□□□ 1.81
CLN5-201ENST00000377453 RLBP1P12271 317 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms