RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 GOLGA2Q08379 1002 aa23.8■■□□□ 1.4
SF1-203ENST00000377387 LAMC1P11047 1609 aa23.79■■□□□ 1.4
SF1-203ENST00000377387 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
SF1-203ENST00000377387 APAF1O14727 1248 aa23.78■■□□□ 1.4
SF1-203ENST00000377387 ZMYM4Q5VZL5 1548 aa23.77■■□□□ 1.4
SF1-203ENST00000377387 MS4A1P11836 297 aa23.76■■□□□ 1.39
SF1-203ENST00000377387 SPINK5Q9NQ38 1064 aaPredicted RBP23.75■■□□□ 1.39
SF1-203ENST00000377387 SCAF11Q99590 1463 aaKnown RBP23.75■■□□□ 1.39
SF1-203ENST00000377387 FANCAO15360 1455 aa23.74■■□□□ 1.39
SF1-203ENST00000377387 ADGRF5Q8IZF2 1346 aa23.74■■□□□ 1.39
SF1-203ENST00000377387 TNNT2P45379 298 aaPredicted RBP23.73■■□□□ 1.39
SF1-203ENST00000377387 MADDQ8WXG6 1647 aa23.73■■□□□ 1.39
SF1-203ENST00000377387 UHRF1BP1LA0JNW5 1464 aa23.72■■□□□ 1.39
SF1-203ENST00000377387 KANK1Q14678 1352 aa23.71■■□□□ 1.39
SF1-203ENST00000377387 UGGT1Q9NYU2 1555 aa23.71■■□□□ 1.39
SF1-203ENST00000377387 RNF17Q9BXT8 1623 aaKnown RBP23.7■■□□□ 1.39
SF1-203ENST00000377387 RGS3P49796 1198 aa23.7■■□□□ 1.39
SF1-203ENST00000377387 SLC4A3P48751 1232 aa23.7■■□□□ 1.38
SF1-203ENST00000377387 ZFYVE16Q7Z3T8 1539 aa23.7■■□□□ 1.38
SF1-203ENST00000377387 BCAR3O75815 825 aa23.7■■□□□ 1.38
SF1-203ENST00000377387 SLFN5Q08AF3 891 aa23.69■■□□□ 1.38
SF1-203ENST00000377387 CLTCL1P53675 1640 aa23.69■■□□□ 1.38
SF1-203ENST00000377387 CARD14Q9BXL6 1004 aa23.69■■□□□ 1.38
SF1-203ENST00000377387 INSRP06213 1382 aa23.69■■□□□ 1.38
SF1-203ENST00000377387 NEFMP07197 916 aa23.68■■□□□ 1.38
SF1-203ENST00000377387 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
SF1-203ENST00000377387 ZNF521Q96K83 1311 aa23.67■■□□□ 1.38
SF1-203ENST00000377387 DMRT2Q9Y5R5 561 aa23.67■■□□□ 1.38
SF1-203ENST00000377387 ASXL1Q8IXJ9 1541 aa23.67■■□□□ 1.38
SF1-203ENST00000377387 ADGRL1O94910 1474 aa23.67■■□□□ 1.38
SF1-203ENST00000377387 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.66■■□□□ 1.38
SF1-203ENST00000377387 EIF3AQ14152 1382 aaKnown RBP23.66■■□□□ 1.38
SF1-203ENST00000377387 TRPM2O94759 1503 aa23.66■■□□□ 1.38
SF1-203ENST00000377387 GGT6Q6P531 493 aa23.66■■□□□ 1.38
SF1-203ENST00000377387 ASXL2Q76L83 1435 aa23.65■■□□□ 1.38
SF1-203ENST00000377387 IQGAP1P46940 1657 aa23.65■■□□□ 1.38
SF1-203ENST00000377387 TRAK1Q9UPV9 953 aa23.65■■□□□ 1.38
SF1-203ENST00000377387 PTPRTO14522 1441 aa23.64■■□□□ 1.38
SF1-203ENST00000377387 KDM2BQ8NHM5 1336 aa23.64■■□□□ 1.37
SF1-203ENST00000377387 NUTM2DQ5VT03 806 aaPredicted RBP23.63■■□□□ 1.37
SF1-203ENST00000377387 CENPQQ7L2Z9 268 aaPredicted RBP23.63■■□□□ 1.37
SF1-203ENST00000377387 CFAP65Q6ZU64 1925 aaKnown RBP23.62■■□□□ 1.37
SF1-203ENST00000377387 SPHKAPQ2M3C7 1700 aa23.62■■□□□ 1.37
SF1-203ENST00000377387 ATP7AQ04656 1500 aa23.62■■□□□ 1.37
SF1-203ENST00000377387 RTEL1-TNFRSF6BF6WH68 1400 aa23.62■■□□□ 1.37
SF1-203ENST00000377387 STAC3Q96MF2 364 aa23.61■■□□□ 1.37
SF1-203ENST00000377387 RRP7AQ9Y3A4 280 aaKnown RBP23.61■■□□□ 1.37
SF1-203ENST00000377387 SYNMO15061 1565 aa23.6■■□□□ 1.37
SF1-203ENST00000377387 TMEM132EQ6IEE7 984 aa23.6■■□□□ 1.37
SF1-203ENST00000377387 PIK3C2GO75747 1445 aa23.59■■□□□ 1.37
SF1-203ENST00000377387 CEP152O94986 1710 aa23.58■■□□□ 1.37
SF1-203ENST00000377387 NPM1P06748 294 aaKnown RBP eCLIP23.58■■□□□ 1.36
SF1-203ENST00000377387 SLC12A5Q9H2X9 1139 aa23.58■■□□□ 1.36
SF1-203ENST00000377387 CANXP27824 592 aaKnown RBP23.56■■□□□ 1.36
SF1-203ENST00000377387 DAXXQ9UER7 740 aaPredicted RBP23.55■■□□□ 1.36
SF1-203ENST00000377387 ERVK-7P63135 1459 aa23.55■■□□□ 1.36
SF1-203ENST00000377387 MORC1Q86VD1 984 aa23.55■■□□□ 1.36
SF1-203ENST00000377387 FRAT1Q92837 279 aaPredicted RBP23.55■■□□□ 1.36
SF1-203ENST00000377387 RAPGEF3O95398 923 aa23.54■■□□□ 1.36
SF1-203ENST00000377387 E9PSI1 815 aa23.54■■□□□ 1.36
SF1-203ENST00000377387 TRMT2AQ8IZ69 625 aaKnown RBP23.54■■□□□ 1.36
SF1-203ENST00000377387 MYOM1P52179 1685 aa23.53■■□□□ 1.36
SF1-203ENST00000377387 DDRGK1Q96HY6 314 aa23.53■■□□□ 1.36
SF1-203ENST00000377387 FAM161AQ3B820 660 aa23.53■■□□□ 1.36
SF1-203ENST00000377387 PANK1Q8TE04 598 aa23.53■■□□□ 1.36
SF1-203ENST00000377387 TET3O43151 1660 aa23.52■■□□□ 1.36
SF1-203ENST00000377387 COG6Q9Y2V7 657 aa23.52■■□□□ 1.36
SF1-203ENST00000377387 CENPJQ9HC77 1338 aaPredicted RBP23.52■■□□□ 1.36
SF1-203ENST00000377387 C8orf34Q49A92 452 aa23.52■■□□□ 1.36
SF1-203ENST00000377387 KDM5AP29375 1690 aaKnown RBP23.51■■□□□ 1.35
SF1-203ENST00000377387 NKTRP30414 1462 aaKnown RBP23.51■■□□□ 1.35
SF1-203ENST00000377387 NPC1L1Q9UHC9 1359 aa23.51■■□□□ 1.35
SF1-203ENST00000377387 IGHDP01880 384 aa23.51■■□□□ 1.35
SF1-203ENST00000377387 ABCA9Q8IUA7 1624 aa23.5■■□□□ 1.35
SF1-203ENST00000377387 NOS1P29475 1434 aa23.5■■□□□ 1.35
SF1-203ENST00000377387 WWC1Q8IX03 1113 aa23.5■■□□□ 1.35
SF1-203ENST00000377387 OSCARQ8IYS5 282 aa23.5■■□□□ 1.35
SF1-203ENST00000377387 INO80Q9ULG1 1556 aaPredicted RBP23.49■■□□□ 1.35
SF1-203ENST00000377387 SAFB2Q14151 953 aaKnown RBP eCLIP23.49■■□□□ 1.35
SF1-203ENST00000377387 BCL2L13Q9BXK5 485 aa23.49■■□□□ 1.35
SF1-203ENST00000377387 PPM1GO15355 546 aaPredicted RBP23.48■■□□□ 1.35
SF1-203ENST00000377387 ABCA6Q8N139 1617 aa23.47■■□□□ 1.35
SF1-203ENST00000377387 NSD3Q9BZ95 1437 aa23.47■■□□□ 1.35
SF1-203ENST00000377387 DEPDC5O75140 1603 aa23.46■■□□□ 1.35
SF1-203ENST00000377387 MAP3K4Q9Y6R4 1608 aa23.45■■□□□ 1.34
SF1-203ENST00000377387 SLC24A1O60721 1099 aa23.45■■□□□ 1.34
SF1-203ENST00000377387 MROH1Q8NDA8 1641 aa23.44■■□□□ 1.34
SF1-203ENST00000377387 MTHFSP49914 203 aa23.44■■□□□ 1.34
SF1-203ENST00000377387 TCP11L2Q8N4U5 519 aa23.44■■□□□ 1.34
SF1-203ENST00000377387 ARAP3Q8WWN8 1544 aa23.44■■□□□ 1.34
SF1-203ENST00000377387 CD109Q6YHK3 1445 aa23.44■■□□□ 1.34
SF1-203ENST00000377387 TNNQ9UQP3 1299 aa23.43■■□□□ 1.34
SF1-203ENST00000377387 KIDINS220Q9ULH0 1771 aa23.43■■□□□ 1.34
SF1-203ENST00000377387 CLUAP1Q96AJ1 413 aa23.42■■□□□ 1.34
SF1-203ENST00000377387 VWDEQ8N2E2 1590 aa23.41■■□□□ 1.34
SF1-203ENST00000377387 KIF1BO60333 1816 aa23.4■■□□□ 1.34
SF1-203ENST00000377387 NFKBIBQ15653 356 aa23.39■■□□□ 1.34
SF1-203ENST00000377387 USP35Q9P2H5 1018 aa23.39■■□□□ 1.33
SF1-203ENST00000377387 MYOM2P54296 1465 aa23.39■■□□□ 1.33
SF1-203ENST00000377387 PPRC1Q5VV67 1664 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms