RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 PLEKHH1Q9ULM0 1364 aa16.86■□□□□ 0.29
USP11-204ENST00000377107 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
USP11-204ENST00000377107 POLR1AO95602 1720 aaPredicted RBP16.85■□□□□ 0.29
USP11-204ENST00000377107 BACH2Q9BYV9 841 aa16.84■□□□□ 0.29
USP11-204ENST00000377107 DUSP27Q5VZP5 1158 aa16.84■□□□□ 0.29
USP11-204ENST00000377107 CLUAP1Q96AJ1 413 aa16.83■□□□□ 0.29
USP11-204ENST00000377107 GPRASP1Q5JY77 1395 aa16.83■□□□□ 0.29
USP11-204ENST00000377107 PREX2Q70Z35 1606 aa16.83■□□□□ 0.29
USP11-204ENST00000377107 MAGI2Q86UL8 1455 aa16.82■□□□□ 0.28
USP11-204ENST00000377107 DUOX2Q9NRD8 1548 aa16.82■□□□□ 0.28
USP11-204ENST00000377107 COG6Q9Y2V7 657 aa16.81■□□□□ 0.28
USP11-204ENST00000377107 EIF3AQ14152 1382 aaKnown RBP16.81■□□□□ 0.28
USP11-204ENST00000377107 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
USP11-204ENST00000377107 CHD1O14646 1710 aa16.81■□□□□ 0.28
USP11-204ENST00000377107 ABCC2Q92887 1545 aa16.81■□□□□ 0.28
USP11-204ENST00000377107 CARD14Q9BXL6 1004 aa16.8■□□□□ 0.28
USP11-204ENST00000377107 PANK1Q8TE04 598 aa16.8■□□□□ 0.28
USP11-204ENST00000377107 U2SURPO15042 1029 aaKnown RBP16.79■□□□□ 0.28
USP11-204ENST00000377107 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
USP11-204ENST00000377107 PPM1GO15355 546 aaPredicted RBP16.78■□□□□ 0.28
USP11-204ENST00000377107 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.28
USP11-204ENST00000377107 SLFN5Q08AF3 891 aa16.77■□□□□ 0.28
USP11-204ENST00000377107 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.28
USP11-204ENST00000377107 RAPGEF3O95398 923 aa16.77■□□□□ 0.27
USP11-204ENST00000377107 U2AF1L5P0DN76 240 aaPredicted RBP16.77■□□□□ 0.27
USP11-204ENST00000377107 U2AF1Q01081 240 aaKnown RBP eCLIP16.77■□□□□ 0.27
USP11-204ENST00000377107 SRPK2P78362 688 aaKnown RBP16.76■□□□□ 0.27
USP11-204ENST00000377107 SCAF11Q99590 1463 aaKnown RBP16.76■□□□□ 0.27
USP11-204ENST00000377107 FANCAO15360 1455 aa16.75■□□□□ 0.27
USP11-204ENST00000377107 CABP2Q9NPB3 220 aa16.75■□□□□ 0.27
USP11-204ENST00000377107 MS4A1P11836 297 aa16.75■□□□□ 0.27
USP11-204ENST00000377107 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
USP11-204ENST00000377107 UGGT1Q9NYU2 1555 aa16.75■□□□□ 0.27
USP11-204ENST00000377107 MTHFSP49914 203 aa16.74■□□□□ 0.27
USP11-204ENST00000377107 CENPQQ7L2Z9 268 aaPredicted RBP16.74■□□□□ 0.27
USP11-204ENST00000377107 MYO5CQ9NQX4 1742 aa16.73■□□□□ 0.27
USP11-204ENST00000377107 MAST1Q9Y2H9 1570 aa16.73■□□□□ 0.27
USP11-204ENST00000377107 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
USP11-204ENST00000377107 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
USP11-204ENST00000377107 CFAP65Q6ZU64 1925 aaKnown RBP16.73■□□□□ 0.27
USP11-204ENST00000377107 E9PSI1 815 aa16.73■□□□□ 0.27
USP11-204ENST00000377107 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
USP11-204ENST00000377107 TCP11L2Q8N4U5 519 aa16.72■□□□□ 0.27
USP11-204ENST00000377107 ATP10AO60312 1499 aa16.72■□□□□ 0.27
USP11-204ENST00000377107 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
USP11-204ENST00000377107 BLMP54132 1417 aaPredicted RBP16.71■□□□□ 0.26
USP11-204ENST00000377107 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
USP11-204ENST00000377107 TNNQ9UQP3 1299 aa16.7■□□□□ 0.26
USP11-204ENST00000377107 NOS1P29475 1434 aa16.7■□□□□ 0.26
USP11-204ENST00000377107 WWC1Q8IX03 1113 aa16.69■□□□□ 0.26
USP11-204ENST00000377107 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
USP11-204ENST00000377107 MINK1Q8N4C8 1332 aaPredicted RBP16.69■□□□□ 0.26
USP11-204ENST00000377107 POGKQ9P215 609 aa16.69■□□□□ 0.26
USP11-204ENST00000377107 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
USP11-204ENST00000377107 MLECQ14165 292 aa16.68■□□□□ 0.26
USP11-204ENST00000377107 NSD3Q9BZ95 1437 aa16.68■□□□□ 0.26
USP11-204ENST00000377107 UNC13BO14795 1591 aa16.68■□□□□ 0.26
USP11-204ENST00000377107 IGHDP01880 384 aa16.67■□□□□ 0.26
USP11-204ENST00000377107 IQGAP3Q86VI3 1631 aa16.67■□□□□ 0.26
USP11-204ENST00000377107 EIF2AK4Q9P2K8 1649 aaKnown RBP16.67■□□□□ 0.26
USP11-204ENST00000377107 ASXL1Q8IXJ9 1541 aa16.67■□□□□ 0.26
USP11-204ENST00000377107 ARXQ96QS3 562 aa16.66■□□□□ 0.26
USP11-204ENST00000377107 STAC3Q96MF2 364 aa16.66■□□□□ 0.26
USP11-204ENST00000377107 SPRYD3Q8NCJ5 442 aa16.66■□□□□ 0.26
USP11-204ENST00000377107 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
USP11-204ENST00000377107 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
USP11-204ENST00000377107 TSR2Q969E8 191 aaKnown RBP16.65■□□□□ 0.26
USP11-204ENST00000377107 ABCC1P33527 1531 aa16.65■□□□□ 0.26
USP11-204ENST00000377107 ZMYM4Q5VZL5 1548 aa16.65■□□□□ 0.26
USP11-204ENST00000377107 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.25
USP11-204ENST00000377107 SLC24A1O60721 1099 aa16.64■□□□□ 0.25
USP11-204ENST00000377107 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
USP11-204ENST00000377107 CGNL1Q0VF96 1302 aa16.63■□□□□ 0.25
USP11-204ENST00000377107 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
USP11-204ENST00000377107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
USP11-204ENST00000377107 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
USP11-204ENST00000377107 FBLN1P23142 703 aa16.62■□□□□ 0.25
USP11-204ENST00000377107 E9PCH4 1651 aa16.62■□□□□ 0.25
USP11-204ENST00000377107 PLXNC1O60486 1568 aa16.62■□□□□ 0.25
USP11-204ENST00000377107 ZNF521Q96K83 1311 aa16.61■□□□□ 0.25
USP11-204ENST00000377107 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
USP11-204ENST00000377107 KDM2BQ8NHM5 1336 aa16.6■□□□□ 0.25
USP11-204ENST00000377107 MAPK8IP3Q9UPT6 1336 aa16.6■□□□□ 0.25
USP11-204ENST00000377107 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
USP11-204ENST00000377107 CLTCL1P53675 1640 aa16.6■□□□□ 0.25
USP11-204ENST00000377107 VGFO15240 615 aaPredicted RBP16.59■□□□□ 0.25
USP11-204ENST00000377107 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
USP11-204ENST00000377107 NKTRP30414 1462 aaKnown RBP16.59■□□□□ 0.25
USP11-204ENST00000377107 C8orf34Q49A92 452 aa16.59■□□□□ 0.25
USP11-204ENST00000377107 SMC4Q9NTJ3 1288 aa16.59■□□□□ 0.25
USP11-204ENST00000377107 RTEL1-TNFRSF6BF6WH68 1400 aa16.59■□□□□ 0.25
USP11-204ENST00000377107 RLBP1P12271 317 aa16.58■□□□□ 0.24
USP11-204ENST00000377107 IDI1Q13907 227 aa16.58■□□□□ 0.24
USP11-204ENST00000377107 NFKBIBQ15653 356 aa16.58■□□□□ 0.24
USP11-204ENST00000377107 C14orf93Q9H972 538 aaKnown RBP16.58■□□□□ 0.24
USP11-204ENST00000377107 ERVK-7P63135 1459 aa16.57■□□□□ 0.24
USP11-204ENST00000377107 CYB5RLQ6IPT4 315 aa16.57■□□□□ 0.24
USP11-204ENST00000377107 ITPRIPQ8IWB1 547 aa16.57■□□□□ 0.24
USP11-204ENST00000377107 IL27Q8NEV9 243 aa16.57■□□□□ 0.24
USP11-204ENST00000377107 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms