RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 NAT10Q9H0A0 1025 aaKnown RBP11.96□□□□□ -0.49
SPEN-201ENST00000375759 MNS1Q8NEH6 495 aa11.96□□□□□ -0.49
SPEN-201ENST00000375759 IFT57Q9NWB7 429 aa11.96□□□□□ -0.49
SPEN-201ENST00000375759 BICD2Q8TD16 824 aa11.96□□□□□ -0.49
SPEN-201ENST00000375759 AMPHP49418 695 aa11.96□□□□□ -0.49
SPEN-201ENST00000375759 AAMPQ13685 434 aa11.96□□□□□ -0.5
SPEN-201ENST00000375759 CCDC66A2RUB6 948 aa11.96□□□□□ -0.5
SPEN-201ENST00000375759 NASPP49321 788 aaPredicted RBP11.95□□□□□ -0.5
SPEN-201ENST00000375759 MLECQ14165 292 aa11.95□□□□□ -0.5
SPEN-201ENST00000375759 MRE11P49959 708 aa11.95□□□□□ -0.5
SPEN-201ENST00000375759 EXOC6Q8TAG9 804 aa11.95□□□□□ -0.5
SPEN-201ENST00000375759 RSPH4AQ5TD94 716 aa11.94□□□□□ -0.5
SPEN-201ENST00000375759 CPLX1O14810 134 aa11.94□□□□□ -0.5
SPEN-201ENST00000375759 DCTN1Q14203 1278 aa11.94□□□□□ -0.5
SPEN-201ENST00000375759 INTS3Q68E01 1043 aaKnown RBP11.94□□□□□ -0.5
SPEN-201ENST00000375759 CCDC144AA2RUR9 1427 aa11.94□□□□□ -0.5
SPEN-201ENST00000375759 PLIN1O60240 522 aa11.93□□□□□ -0.5
SPEN-201ENST00000375759 AMOTL1Q8IY63 956 aa11.93□□□□□ -0.5
SPEN-201ENST00000375759 ANO2Q9NQ90 1003 aa11.93□□□□□ -0.5
SPEN-201ENST00000375759 ERCC4Q92889 916 aaPredicted RBP11.93□□□□□ -0.5
SPEN-201ENST00000375759 PRKRIP1Q9H875 184 aaPredicted RBP11.93□□□□□ -0.5
SPEN-201ENST00000375759 TCEAL9Q9UHQ7 104 aa11.92□□□□□ -0.5
SPEN-201ENST00000375759 RRP7AQ9Y3A4 280 aaKnown RBP11.92□□□□□ -0.5
SPEN-201ENST00000375759 CCDC191Q8NCU4 936 aa11.92□□□□□ -0.5
SPEN-201ENST00000375759 PANK3Q9H999 370 aa11.92□□□□□ -0.5
SPEN-201ENST00000375759 SMC3Q9UQE7 1217 aa11.92□□□□□ -0.5
SPEN-201ENST00000375759 NEXNQ0ZGT2 675 aa11.92□□□□□ -0.5
SPEN-201ENST00000375759 CCDC73Q6ZRK6 1079 aa11.92□□□□□ -0.5
SPEN-201ENST00000375759 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
SPEN-201ENST00000375759 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
SPEN-201ENST00000375759 BCL2L13Q9BXK5 485 aa11.91□□□□□ -0.5
SPEN-201ENST00000375759 TRDNQ13061 729 aa11.91□□□□□ -0.5
SPEN-201ENST00000375759 EFCAB2Q5VUJ9 269 aa11.91□□□□□ -0.5
SPEN-201ENST00000375759 NGDNQ8NEJ9 315 aaKnown RBP11.91□□□□□ -0.5
SPEN-201ENST00000375759 USP47Q96K76 1375 aa11.91□□□□□ -0.5
SPEN-201ENST00000375759 RDXP35241 583 aaKnown RBP11.91□□□□□ -0.5
SPEN-201ENST00000375759 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.91□□□□□ -0.5
SPEN-201ENST00000375759 GTF2E1P29083 439 aaPredicted RBP11.9□□□□□ -0.5
SPEN-201ENST00000375759 HMGN5P82970 282 aaKnown RBP11.9□□□□□ -0.5
SPEN-201ENST00000375759 C9orf78Q9NZ63 289 aaPredicted RBP11.9□□□□□ -0.5
SPEN-201ENST00000375759 C22orf23Q9BZE7 217 aa11.9□□□□□ -0.5
SPEN-201ENST00000375759 MYO6Q9UM54 1294 aa11.9□□□□□ -0.5
SPEN-201ENST00000375759 SMARCA2P51531 1590 aa11.9□□□□□ -0.5
SPEN-201ENST00000375759 CCP110O43303 1012 aa11.9□□□□□ -0.5
SPEN-201ENST00000375759 NFKBIBQ15653 356 aa11.9□□□□□ -0.5
SPEN-201ENST00000375759 H0YHG0 523 aa11.9□□□□□ -0.51
SPEN-201ENST00000375759 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.51
SPEN-201ENST00000375759 IFIT2P09913 472 aaKnown RBP11.89□□□□□ -0.51
SPEN-201ENST00000375759 ST20-MTHFSA0A0A6YYL1 179 aa11.89□□□□□ -0.51
SPEN-201ENST00000375759 CCDC173Q0VFZ6 552 aa11.89□□□□□ -0.51
SPEN-201ENST00000375759 OLFM4Q6UX06 510 aa11.89□□□□□ -0.51
SPEN-201ENST00000375759 NOL10Q9BSC4 688 aaKnown RBP11.89□□□□□ -0.51
SPEN-201ENST00000375759 VPS37CA5D8V6 355 aaPredicted RBP11.89□□□□□ -0.51
SPEN-201ENST00000375759 SAFBQ15424 915 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPEN-201ENST00000375759 API5Q9BZZ5 524 aaKnown RBP11.89□□□□□ -0.51
SPEN-201ENST00000375759 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.89□□□□□ -0.51
SPEN-201ENST00000375759 NAP1L1P55209 391 aaKnown RBP11.88□□□□□ -0.51
SPEN-201ENST00000375759 EID1Q9Y6B2 187 aa11.88□□□□□ -0.51
SPEN-201ENST00000375759 C1orf141Q5JVX7 400 aa11.88□□□□□ -0.51
SPEN-201ENST00000375759 EVC2Q86UK5 1308 aa11.88□□□□□ -0.51
SPEN-201ENST00000375759 R3HCC1Q9Y3T6 440 aaKnown RBP11.88□□□□□ -0.51
SPEN-201ENST00000375759 MBD3O95983 291 aa11.87□□□□□ -0.51
SPEN-201ENST00000375759 ERICH2A1L162 156 aa11.87□□□□□ -0.51
SPEN-201ENST00000375759 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
SPEN-201ENST00000375759 ERC2O15083 957 aa11.87□□□□□ -0.51
SPEN-201ENST00000375759 COG3Q96JB2 828 aa11.87□□□□□ -0.51
SPEN-201ENST00000375759 APPP05067 770 aa11.86□□□□□ -0.51
SPEN-201ENST00000375759 DHX57Q6P158 1386 aaKnown RBP11.86□□□□□ -0.51
SPEN-201ENST00000375759 DHX8Q14562 1220 aaKnown RBP11.86□□□□□ -0.51
SPEN-201ENST00000375759 CAGE1Q8TC20 777 aa11.86□□□□□ -0.51
SPEN-201ENST00000375759 LEKR1Q6ZMV7 388 aa11.86□□□□□ -0.51
SPEN-201ENST00000375759 NINLQ9Y2I6 1382 aa11.86□□□□□ -0.51
SPEN-201ENST00000375759 CT47A1Q5JQC4 288 aaPredicted RBP11.86□□□□□ -0.51
SPEN-201ENST00000375759 CCDC9Q9Y3X0 531 aaKnown RBP11.86□□□□□ -0.51
SPEN-201ENST00000375759 KIF7Q2M1P5 1343 aa11.86□□□□□ -0.51
SPEN-201ENST00000375759 HSP90AB4PQ58FF6 505 aa11.85□□□□□ -0.51
SPEN-201ENST00000375759 NFXL1Q6ZNB6 911 aa11.85□□□□□ -0.51
SPEN-201ENST00000375759 EPS15P42566 896 aa11.85□□□□□ -0.51
SPEN-201ENST00000375759 ODF2Q5BJF6 829 aa11.85□□□□□ -0.51
SPEN-201ENST00000375759 KIF3BO15066 747 aa11.85□□□□□ -0.51
SPEN-201ENST00000375759 LTV1Q96GA3 475 aaPredicted RBP11.85□□□□□ -0.51
SPEN-201ENST00000375759 TEFQ10587 303 aa11.85□□□□□ -0.51
SPEN-201ENST00000375759 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
SPEN-201ENST00000375759 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
SPEN-201ENST00000375759 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
SPEN-201ENST00000375759 G3BP1Q13283 466 aaKnown RBP eCLIP11.84□□□□□ -0.513e-7■□□□□ 9.7
SPEN-201ENST00000375759 ANO8Q9HCE9 1232 aaPredicted RBP11.84□□□□□ -0.51
SPEN-201ENST00000375759 WASHC2CQ9Y4E1 1318 aa11.84□□□□□ -0.51
SPEN-201ENST00000375759 TRAK2O60296 914 aa11.84□□□□□ -0.51
SPEN-201ENST00000375759 MCM2P49736 904 aa11.83□□□□□ -0.51
SPEN-201ENST00000375759 PSMA5P28066 241 aa11.83□□□□□ -0.52
SPEN-201ENST00000375759 BRMS1Q9HCU9 246 aa11.83□□□□□ -0.52
SPEN-201ENST00000375759 PDCP20941 246 aa11.83□□□□□ -0.52
SPEN-201ENST00000375759 SDF4Q9BRK5 362 aa11.83□□□□□ -0.52
SPEN-201ENST00000375759 TRAK1Q9UPV9 953 aa11.83□□□□□ -0.52
SPEN-201ENST00000375759 TRIM5Q9C035 493 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 RAPGEF2Q9Y4G8 1499 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 CCDC43Q96MW1 224 aaKnown RBP11.82□□□□□ -0.52
SPEN-201ENST00000375759 WIZO95785 1651 aa11.82□□□□□ -0.52
SPEN-201ENST00000375759 CDC45O75419 566 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms