RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 TMEM134Q9H6X4 195 aa11.5□□□□□ -0.57
PMS1-202ENST00000374826 PCDHB3Q9Y5E6 796 aa11.5□□□□□ -0.57
PMS1-202ENST00000374826 RCCD1A6NED2 376 aa11.49□□□□□ -0.57
PMS1-202ENST00000374826 SEMA3EO15041 775 aa11.49□□□□□ -0.57
PMS1-202ENST00000374826 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
PMS1-202ENST00000374826 TRAF7Q6Q0C0 670 aa11.49□□□□□ -0.57
PMS1-202ENST00000374826 NRG2O14511 850 aaPredicted RBP11.47□□□□□ -0.57
PMS1-202ENST00000374826 LCE2BO14633 110 aa11.47□□□□□ -0.57
PMS1-202ENST00000374826 FCHSD2O94868 740 aa11.47□□□□□ -0.57
PMS1-202ENST00000374826 BLOC1S3Q6QNY0 202 aa11.46□□□□□ -0.57
PMS1-202ENST00000374826 ACTN4O43707 911 aaKnown RBP11.43□□□□□ -0.58
PMS1-202ENST00000374826 KMT5BQ4FZB7 885 aa11.42□□□□□ -0.58
PMS1-202ENST00000374826 PDZRN3Q9UPQ7 1066 aa11.42□□□□□ -0.58
PMS1-202ENST00000374826 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.41□□□□□ -0.58
PMS1-202ENST00000374826 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
PMS1-202ENST00000374826 OATP04181 439 aa11.41□□□□□ -0.58
PMS1-202ENST00000374826 SLC10A3P09131 477 aa11.41□□□□□ -0.58
PMS1-202ENST00000374826 PXYLP1Q8TE99 480 aa11.4□□□□□ -0.58
PMS1-202ENST00000374826 CFHP08603 1231 aa11.39□□□□□ -0.59
PMS1-202ENST00000374826 SLC19A1P41440 591 aa11.38□□□□□ -0.59
PMS1-202ENST00000374826 TESPA1A2RU30 521 aaPredicted RBP11.37□□□□□ -0.59
PMS1-202ENST00000374826 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
PMS1-202ENST00000374826 HIC1Q14526 733 aa11.37□□□□□ -0.59
PMS1-202ENST00000374826 TLL1O43897 1013 aa11.36□□□□□ -0.59
PMS1-202ENST00000374826 EMID1Q96A84 441 aaPredicted RBP11.36□□□□□ -0.59
PMS1-202ENST00000374826 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
PMS1-202ENST00000374826 NR1I2O75469 434 aa11.34□□□□□ -0.59
PMS1-202ENST00000374826 SMYD5Q6GMV2 418 aa11.34□□□□□ -0.59
PMS1-202ENST00000374826 METTL3Q86U44 580 aaKnown RBP11.34□□□□□ -0.59
PMS1-202ENST00000374826 ANKLE1Q8NAG6 615 aa11.34□□□□□ -0.59
PMS1-202ENST00000374826 PPEF1O14829 653 aaPredicted RBP11.33□□□□□ -0.6
PMS1-202ENST00000374826 S1PR4O95977 384 aa11.33□□□□□ -0.6
PMS1-202ENST00000374826 RSPH4AQ5TD94 716 aa11.33□□□□□ -0.6
PMS1-202ENST00000374826 TRIM67Q6ZTA4 783 aa11.32□□□□□ -0.6
PMS1-202ENST00000374826 SCUBE3Q8IX30 993 aa11.32□□□□□ -0.6
PMS1-202ENST00000374826 FECHP22830 423 aa11.31□□□□□ -0.6
PMS1-202ENST00000374826 SPRYD7Q5W111 196 aa11.31□□□□□ -0.6
PMS1-202ENST00000374826 GNPATO15228 680 aa11.3□□□□□ -0.6
PMS1-202ENST00000374826 ADH1BP00325 375 aa11.3□□□□□ -0.6
PMS1-202ENST00000374826 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
PMS1-202ENST00000374826 LIAT1Q6ZQX7 453 aa11.29□□□□□ -0.6
PMS1-202ENST00000374826 SLC6A16Q9GZN6 736 aa11.28□□□□□ -0.6
PMS1-202ENST00000374826 DAXXQ9UER7 740 aaPredicted RBP11.28□□□□□ -0.6
PMS1-202ENST00000374826 PUS10Q3MIT2 529 aaKnown RBP11.27□□□□□ -0.61
PMS1-202ENST00000374826 GPR37O15354 613 aa11.26□□□□□ -0.61
PMS1-202ENST00000374826 ZNF787Q6DD87 383 aa11.25□□□□□ -0.61
PMS1-202ENST00000374826 PRR20EP86478 221 aa11.24□□□□□ -0.61
PMS1-202ENST00000374826 PRR20CP86479 221 aa11.24□□□□□ -0.61
PMS1-202ENST00000374826 PRR20DP86480 221 aa11.24□□□□□ -0.61
PMS1-202ENST00000374826 PRR20BP86481 221 aa11.24□□□□□ -0.61
PMS1-202ENST00000374826 PRR20AP86496 221 aa11.24□□□□□ -0.61
PMS1-202ENST00000374826 SPSB2Q99619 263 aa11.24□□□□□ -0.61
PMS1-202ENST00000374826 ZNF697Q5TEC3 545 aa11.23□□□□□ -0.61
PMS1-202ENST00000374826 HAP1P54257 671 aaPredicted RBP11.22□□□□□ -0.61
PMS1-202ENST00000374826 PLA2G2CQ5R387 149 aa11.22□□□□□ -0.61
PMS1-202ENST00000374826 RDH13Q8NBN7 331 aa11.22□□□□□ -0.61
PMS1-202ENST00000374826 DGAT1O75907 488 aa11.21□□□□□ -0.61
PMS1-202ENST00000374826 DDX11L8A8MPP1 907 aa11.2□□□□□ -0.62
PMS1-202ENST00000374826 GDF9O60383 454 aa11.2□□□□□ -0.62
PMS1-202ENST00000374826 PKDCCQ504Y2 493 aa11.2□□□□□ -0.62
PMS1-202ENST00000374826 MORN1Q5T089 497 aa11.2□□□□□ -0.62
PMS1-202ENST00000374826 NLRP7Q8WX94 980 aa11.2□□□□□ -0.62
PMS1-202ENST00000374826 PHOX2BQ99453 314 aa11.2□□□□□ -0.62
PMS1-202ENST00000374826 ATP6V1AP38606 617 aa11.19□□□□□ -0.62
PMS1-202ENST00000374826 GCGRP47871 477 aa11.18□□□□□ -0.62
PMS1-202ENST00000374826 MYT1Q01538 1121 aa11.18□□□□□ -0.62
PMS1-202ENST00000374826 FUT2Q10981 343 aa11.18□□□□□ -0.62
PMS1-202ENST00000374826 THAP11Q96EK4 314 aa11.18□□□□□ -0.62
PMS1-202ENST00000374826 TNFRSF10AO00220 468 aa11.16□□□□□ -0.62
PMS1-202ENST00000374826 SULF1Q8IWU6 871 aa11.16□□□□□ -0.62
PMS1-202ENST00000374826 SLC27A5Q9Y2P5 690 aa11.15□□□□□ -0.62
PMS1-202ENST00000374826 GPIHBP1Q8IV16 184 aa11.14□□□□□ -0.63
PMS1-202ENST00000374826 FAM160A2Q8N612 972 aaPredicted RBP11.14□□□□□ -0.63
PMS1-202ENST00000374826 FMNL1O95466 1100 aaPredicted RBP11.13□□□□□ -0.63
PMS1-202ENST00000374826 KDM2AQ9Y2K7 1162 aa11.13□□□□□ -0.63
PMS1-202ENST00000374826 SALL2Q9Y467 1007 aaPredicted RBP11.13□□□□□ -0.63
PMS1-202ENST00000374826 FAM187AA6NFU0 413 aa11.12□□□□□ -0.63
PMS1-202ENST00000374826 RPIAP49247 311 aa11.12□□□□□ -0.63
PMS1-202ENST00000374826 PKD2L1Q9P0L9 805 aa11.12□□□□□ -0.63
PMS1-202ENST00000374826 BRICD5Q6PL45 260 aa11.11□□□□□ -0.63
PMS1-202ENST00000374826 ZNF775Q96BV0 537 aaPredicted RBP11.11□□□□□ -0.63
PMS1-202ENST00000374826 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
PMS1-202ENST00000374826 FOXC1Q12948 553 aa11.1□□□□□ -0.63
PMS1-202ENST00000374826 LMOD2Q6P5Q4 547 aa11.1□□□□□ -0.63
PMS1-202ENST00000374826 FCF1Q9Y324 198 aaKnown RBP11.1□□□□□ -0.63
PMS1-202ENST00000374826 POTECB2RU33 542 aa11.07□□□□□ -0.64
PMS1-202ENST00000374826 GRIPAP1Q4V328 841 aa11.07□□□□□ -0.64
PMS1-202ENST00000374826 MSS51Q4VC12 460 aa11.04□□□□□ -0.64
PMS1-202ENST00000374826 RNF19BQ6ZMZ0 732 aa11.04□□□□□ -0.64
PMS1-202ENST00000374826 PRDM9Q9NQV7 894 aa11.04□□□□□ -0.64
PMS1-202ENST00000374826 AAASQ9NRG9 546 aa11.04□□□□□ -0.64
PMS1-202ENST00000374826 IRF6O14896 467 aa11.03□□□□□ -0.64
PMS1-202ENST00000374826 CD46P15529 392 aa11.03□□□□□ -0.64
PMS1-202ENST00000374826 MAP2K5Q13163 448 aa11.03□□□□□ -0.64
PMS1-202ENST00000374826 TOR4AQ9NXH8 423 aa11.03□□□□□ -0.64
PMS1-202ENST00000374826 ST8SIA5O15466 376 aa11.02□□□□□ -0.65
PMS1-202ENST00000374826 ZBTB24O43167 697 aaPredicted RBP11.01□□□□□ -0.65
PMS1-202ENST00000374826 Q3C1V9 767 aa11.01□□□□□ -0.65
PMS1-202ENST00000374826 VSIG10Q8N0Z9 540 aa11.01□□□□□ -0.65
PMS1-202ENST00000374826 CYP4X1Q8N118 509 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms