RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 NEUROD2Q15784 382 aa22.54■■□□□ 1.2
RXRB-201ENST00000374680 ASXL2Q76L83 1435 aa22.54■■□□□ 1.2
RXRB-201ENST00000374680 UHRF1BP1LA0JNW5 1464 aa22.53■■□□□ 1.2
RXRB-201ENST00000374680 APAF1O14727 1248 aa22.53■■□□□ 1.2
RXRB-201ENST00000374680 ZFYVE16Q7Z3T8 1539 aa22.52■■□□□ 1.19
RXRB-201ENST00000374680 CARD14Q9BXL6 1004 aa22.51■■□□□ 1.19
RXRB-201ENST00000374680 PLEKHH1Q9ULM0 1364 aa22.5■■□□□ 1.19
RXRB-201ENST00000374680 SCAF11Q99590 1463 aaKnown RBP22.49■■□□□ 1.19
RXRB-201ENST00000374680 SLC12A5Q9H2X9 1139 aa22.49■■□□□ 1.19
RXRB-201ENST00000374680 RTEL1-TNFRSF6BF6WH68 1400 aa22.49■■□□□ 1.19
RXRB-201ENST00000374680 CLTCL1P53675 1640 aa22.48■■□□□ 1.19
RXRB-201ENST00000374680 ATP7AQ04656 1500 aa22.48■■□□□ 1.19
RXRB-201ENST00000374680 ANP32AP39687 249 aaKnown RBP22.48■■□□□ 1.19
RXRB-201ENST00000374680 SPINK5Q9NQ38 1064 aaPredicted RBP22.48■■□□□ 1.19
RXRB-201ENST00000374680 EIF2AK4Q9P2K8 1649 aaKnown RBP22.47■■□□□ 1.19
RXRB-201ENST00000374680 NOP58Q9Y2X3 529 aaKnown RBP22.47■■□□□ 1.19
RXRB-201ENST00000374680 PTPRTO14522 1441 aa22.45■■□□□ 1.18
RXRB-201ENST00000374680 GOLGA2Q08379 1002 aa22.45■■□□□ 1.18
RXRB-201ENST00000374680 OSCARQ8IYS5 282 aa22.45■■□□□ 1.18
RXRB-201ENST00000374680 RRP7AQ9Y3A4 280 aaKnown RBP22.45■■□□□ 1.18
RXRB-201ENST00000374680 STK26Q9P289 416 aa22.44■■□□□ 1.18
RXRB-201ENST00000374680 DUSP27Q5VZP5 1158 aa22.44■■□□□ 1.18
RXRB-201ENST00000374680 DMRT2Q9Y5R5 561 aa22.43■■□□□ 1.18
RXRB-201ENST00000374680 MADDQ8WXG6 1647 aa22.43■■□□□ 1.18
RXRB-201ENST00000374680 TRPM2O94759 1503 aa22.43■■□□□ 1.18
RXRB-201ENST00000374680 NOS1P29475 1434 aa22.42■■□□□ 1.18
RXRB-201ENST00000374680 EIF3AQ14152 1382 aaKnown RBP22.42■■□□□ 1.18
RXRB-201ENST00000374680 PDE4AP27815 886 aa22.41■■□□□ 1.18
RXRB-201ENST00000374680 BLMP54132 1417 aaPredicted RBP22.4■■□□□ 1.18
RXRB-201ENST00000374680 BCAR3O75815 825 aa22.4■■□□□ 1.18
RXRB-201ENST00000374680 CENPJQ9HC77 1338 aaPredicted RBP22.39■■□□□ 1.17
RXRB-201ENST00000374680 MORC1Q86VD1 984 aa22.39■■□□□ 1.17
RXRB-201ENST00000374680 ZBTB47Q9UFB7 747 aaPredicted RBP22.39■■□□□ 1.17
RXRB-201ENST00000374680 SPHKAPQ2M3C7 1700 aa22.37■■□□□ 1.17
RXRB-201ENST00000374680 CD109Q6YHK3 1445 aa22.37■■□□□ 1.17
RXRB-201ENST00000374680 IPO9Q96P70 1041 aaKnown RBP22.36■■□□□ 1.17
RXRB-201ENST00000374680 STAC3Q96MF2 364 aa22.36■■□□□ 1.17
RXRB-201ENST00000374680 LAMC1P11047 1609 aa22.34■■□□□ 1.17
RXRB-201ENST00000374680 ASXL1Q8IXJ9 1541 aa22.34■■□□□ 1.17
RXRB-201ENST00000374680 RGS3P49796 1198 aa22.34■■□□□ 1.17
RXRB-201ENST00000374680 SLFN5Q08AF3 891 aa22.34■■□□□ 1.17
RXRB-201ENST00000374680 CABP2Q9NPB3 220 aa22.34■■□□□ 1.17
RXRB-201ENST00000374680 TCERG1O14776 1098 aaKnown RBP22.33■■□□□ 1.17
RXRB-201ENST00000374680 RNF17Q9BXT8 1623 aaKnown RBP22.32■■□□□ 1.16
RXRB-201ENST00000374680 ERVK-7P63135 1459 aa22.32■■□□□ 1.16
RXRB-201ENST00000374680 TET3O43151 1660 aa22.31■■□□□ 1.16
RXRB-201ENST00000374680 CYB5RLQ6IPT4 315 aa22.3■■□□□ 1.16
RXRB-201ENST00000374680 FRAT1Q92837 279 aaPredicted RBP22.3■■□□□ 1.16
RXRB-201ENST00000374680 LAS1LQ9Y4W2 734 aaKnown RBP22.3■■□□□ 1.16
RXRB-201ENST00000374680 ZMYM4Q5VZL5 1548 aa22.29■■□□□ 1.16
RXRB-201ENST00000374680 BCL2L13Q9BXK5 485 aa22.29■■□□□ 1.16
RXRB-201ENST00000374680 IQGAP1P46940 1657 aa22.29■■□□□ 1.16
RXRB-201ENST00000374680 NPATQ14207 1427 aa22.29■■□□□ 1.16
RXRB-201ENST00000374680 INO80Q9ULG1 1556 aaPredicted RBP22.28■■□□□ 1.16
RXRB-201ENST00000374680 C14orf93Q9H972 538 aaKnown RBP22.28■■□□□ 1.16
RXRB-201ENST00000374680 CEP152O94986 1710 aa22.28■■□□□ 1.16
RXRB-201ENST00000374680 CANXP27824 592 aaKnown RBP22.28■■□□□ 1.16
RXRB-201ENST00000374680 MTHFSP49914 203 aa22.28■■□□□ 1.16
RXRB-201ENST00000374680 BACH2Q9BYV9 841 aa22.28■■□□□ 1.16
RXRB-201ENST00000374680 NSD3Q9BZ95 1437 aa22.28■■□□□ 1.16
RXRB-201ENST00000374680 ABCA9Q8IUA7 1624 aa22.28■■□□□ 1.16
RXRB-201ENST00000374680 ZNF521Q96K83 1311 aa22.27■■□□□ 1.16
RXRB-201ENST00000374680 IDI1Q13907 227 aa22.27■■□□□ 1.16
RXRB-201ENST00000374680 ZNF518AQ6AHZ1 1483 aa22.26■■□□□ 1.15
RXRB-201ENST00000374680 SLC4A3P48751 1232 aa22.25■■□□□ 1.15
RXRB-201ENST00000374680 ARAP3Q8WWN8 1544 aa22.25■■□□□ 1.15
RXRB-201ENST00000374680 MROH1Q8NDA8 1641 aa22.24■■□□□ 1.15
RXRB-201ENST00000374680 SRPK2P78362 688 aaKnown RBP22.24■■□□□ 1.15
RXRB-201ENST00000374680 KIDINS220Q9ULH0 1771 aa22.24■■□□□ 1.15
RXRB-201ENST00000374680 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.24■■□□□ 1.15
RXRB-201ENST00000374680 ABCA6Q8N139 1617 aa22.24■■□□□ 1.15
RXRB-201ENST00000374680 PANK1Q8TE04 598 aa22.24■■□□□ 1.15
RXRB-201ENST00000374680 DEPDC5O75140 1603 aa22.23■■□□□ 1.15
RXRB-201ENST00000374680 FBXO31Q5XUX0 539 aaPredicted RBP22.23■■□□□ 1.15
RXRB-201ENST00000374680 MINK1Q8N4C8 1332 aaPredicted RBP22.22■■□□□ 1.15
RXRB-201ENST00000374680 MLECQ14165 292 aa22.22■■□□□ 1.15
RXRB-201ENST00000374680 PPRC1Q5VV67 1664 aaKnown RBP22.22■■□□□ 1.15
RXRB-201ENST00000374680 WWC1Q8IX03 1113 aa22.22■■□□□ 1.15
RXRB-201ENST00000374680 TCP11L2Q8N4U5 519 aa22.22■■□□□ 1.15
RXRB-201ENST00000374680 COG6Q9Y2V7 657 aa22.22■■□□□ 1.15
RXRB-201ENST00000374680 MAP3K4Q9Y6R4 1608 aa22.21■■□□□ 1.15
RXRB-201ENST00000374680 SYNMO15061 1565 aa22.21■■□□□ 1.15
RXRB-201ENST00000374680 PIK3C2GO75747 1445 aa22.21■■□□□ 1.15
RXRB-201ENST00000374680 VWDEQ8N2E2 1590 aa22.21■■□□□ 1.15
RXRB-201ENST00000374680 GGNBP2Q9H3C7 697 aa22.21■■□□□ 1.15
RXRB-201ENST00000374680 EFCAB6Q5THR3 1501 aa22.21■■□□□ 1.15
RXRB-201ENST00000374680 U2AF1L5P0DN76 240 aaPredicted RBP22.2■■□□□ 1.15
RXRB-201ENST00000374680 U2AF1Q01081 240 aaKnown RBP eCLIP22.2■■□□□ 1.152e-7■■■■□ 22.9
RXRB-201ENST00000374680 CLUAP1Q96AJ1 413 aa22.2■■□□□ 1.14
RXRB-201ENST00000374680 STAG3Q9UJ98 1225 aa22.2■■□□□ 1.14
RXRB-201ENST00000374680 TNNQ9UQP3 1299 aa22.2■■□□□ 1.14
RXRB-201ENST00000374680 E9PSI1 815 aa22.19■■□□□ 1.14
RXRB-201ENST00000374680 U2SURPO15042 1029 aaKnown RBP22.19■■□□□ 1.14
RXRB-201ENST00000374680 MROH2AA6NES4 1674 aa22.19■■□□□ 1.14
RXRB-201ENST00000374680 VGFO15240 615 aaPredicted RBP22.18■■□□□ 1.14
RXRB-201ENST00000374680 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
RXRB-201ENST00000374680 DEKP35659 375 aaKnown RBP22.18■■□□□ 1.14
RXRB-201ENST00000374680 KIF1BO60333 1816 aa22.17■■□□□ 1.14
RXRB-201ENST00000374680 FBLN1P23142 703 aa22.17■■□□□ 1.14
RXRB-201ENST00000374680 POGZQ7Z3K3 1410 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms