RNA–Protein interactions for RNA: ENST00000374270.7

SUSD1-204, Transcript of sushi domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD1, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-204ENST00000374270 APAF1O14727 1248 aa26.41■■□□□ 1.82
SUSD1-204ENST00000374270 MLECQ14165 292 aa26.41■■□□□ 1.82
SUSD1-204ENST00000374270 ATP7AQ04656 1500 aa26.41■■□□□ 1.82
SUSD1-204ENST00000374270 CD109Q6YHK3 1445 aa26.41■■□□□ 1.82
SUSD1-204ENST00000374270 RRP7AQ9Y3A4 280 aaKnown RBP26.4■■□□□ 1.82
SUSD1-204ENST00000374270 CRBNQ96SW2 442 aa26.39■■□□□ 1.82
SUSD1-204ENST00000374270 PRKCSHP14314 528 aaPredicted RBP26.38■■□□□ 1.81
SUSD1-204ENST00000374270 BCL11AQ9H165 835 aa26.38■■□□□ 1.81
SUSD1-204ENST00000374270 CARD14Q9BXL6 1004 aa26.37■■□□□ 1.81
SUSD1-204ENST00000374270 E9PCH4 1651 aa26.37■■□□□ 1.81
SUSD1-204ENST00000374270 PRDM15P57071 1507 aaPredicted RBP26.36■■□□□ 1.81
SUSD1-204ENST00000374270 RTEL1-TNFRSF6BF6WH68 1400 aa26.36■■□□□ 1.81
SUSD1-204ENST00000374270 NOS1P29475 1434 aa26.36■■□□□ 1.81
SUSD1-204ENST00000374270 SCAF11Q99590 1463 aaKnown RBP26.35■■□□□ 1.81
SUSD1-204ENST00000374270 NBR1Q14596 966 aa26.33■■□□□ 1.81
SUSD1-204ENST00000374270 CLTCL1P53675 1640 aa26.33■■□□□ 1.81
SUSD1-204ENST00000374270 EIF3AQ14152 1382 aaKnown RBP26.32■■□□□ 1.8
SUSD1-204ENST00000374270 CENPJQ9HC77 1338 aaPredicted RBP26.32■■□□□ 1.8
SUSD1-204ENST00000374270 MORC1Q86VD1 984 aa26.32■■□□□ 1.8
SUSD1-204ENST00000374270 STAG3Q9UJ98 1225 aa26.32■■□□□ 1.8
SUSD1-204ENST00000374270 PLPPR3Q6T4P5 718 aa26.31■■□□□ 1.8
SUSD1-204ENST00000374270 CABP2Q9NPB3 220 aa26.3■■□□□ 1.8
SUSD1-204ENST00000374270 RNF123Q5XPI4 1314 aa26.3■■□□□ 1.8
SUSD1-204ENST00000374270 PDE3BQ13370 1112 aa26.29■■□□□ 1.8
SUSD1-204ENST00000374270 SPINK5Q9NQ38 1064 aaPredicted RBP26.28■■□□□ 1.8
SUSD1-204ENST00000374270 PLEKHH1Q9ULM0 1364 aa26.28■■□□□ 1.8
SUSD1-204ENST00000374270 GOLGA2Q08379 1002 aa26.27■■□□□ 1.8
SUSD1-204ENST00000374270 PTPRTO14522 1441 aa26.26■■□□□ 1.79
SUSD1-204ENST00000374270 FBXO31Q5XUX0 539 aaPredicted RBP26.25■■□□□ 1.79
SUSD1-204ENST00000374270 EIF2AK4Q9P2K8 1649 aaKnown RBP26.25■■□□□ 1.79
SUSD1-204ENST00000374270 DMRT2Q9Y5R5 561 aa26.25■■□□□ 1.79
SUSD1-204ENST00000374270 TRPM2O94759 1503 aa26.25■■□□□ 1.79
SUSD1-204ENST00000374270 SRPK2P78362 688 aaKnown RBP26.24■■□□□ 1.79
SUSD1-204ENST00000374270 PAK3O75914 559 aaPredicted RBP26.24■■□□□ 1.79
SUSD1-204ENST00000374270 IDI1Q13907 227 aa26.23■■□□□ 1.79
SUSD1-204ENST00000374270 FANCIQ9NVI1 1328 aa26.23■■□□□ 1.79
SUSD1-204ENST00000374270 MINK1Q8N4C8 1332 aaPredicted RBP26.21■■□□□ 1.79
SUSD1-204ENST00000374270 BCAR3O75815 825 aa26.21■■□□□ 1.79
SUSD1-204ENST00000374270 FAM69CQ0P6D2 419 aa26.21■■□□□ 1.79
SUSD1-204ENST00000374270 ANP32AP39687 249 aaKnown RBP26.21■■□□□ 1.79
SUSD1-204ENST00000374270 MADDQ8WXG6 1647 aa26.21■■□□□ 1.79
SUSD1-204ENST00000374270 CANXP27824 592 aaKnown RBP26.2■■□□□ 1.79
SUSD1-204ENST00000374270 FRAT1Q92837 279 aaPredicted RBP26.19■■□□□ 1.78
SUSD1-204ENST00000374270 ZNF518AQ6AHZ1 1483 aa26.19■■□□□ 1.78
SUSD1-204ENST00000374270 BCL2L13Q9BXK5 485 aa26.19■■□□□ 1.78
SUSD1-204ENST00000374270 DUSP27Q5VZP5 1158 aa26.19■■□□□ 1.78
SUSD1-204ENST00000374270 NPATQ14207 1427 aa26.19■■□□□ 1.78
SUSD1-204ENST00000374270 RGS3P49796 1198 aa26.17■■□□□ 1.78
SUSD1-204ENST00000374270 PPM1GO15355 546 aaPredicted RBP26.16■■□□□ 1.78
SUSD1-204ENST00000374270 POGKQ9P215 609 aa26.16■■□□□ 1.78
SUSD1-204ENST00000374270 SPHKAPQ2M3C7 1700 aa26.16■■□□□ 1.78
SUSD1-204ENST00000374270 MTHFSP49914 203 aa26.16■■□□□ 1.78
SUSD1-204ENST00000374270 STAC3Q96MF2 364 aa26.15■■□□□ 1.78
SUSD1-204ENST00000374270 NSD3Q9BZ95 1437 aa26.15■■□□□ 1.78
SUSD1-204ENST00000374270 C14orf93Q9H972 538 aaKnown RBP26.14■■□□□ 1.78
SUSD1-204ENST00000374270 U2SURPO15042 1029 aaKnown RBP26.14■■□□□ 1.78
SUSD1-204ENST00000374270 GGNBP2Q9H3C7 697 aa26.14■■□□□ 1.77
SUSD1-204ENST00000374270 ABCA9Q8IUA7 1624 aa26.12■■□□□ 1.77
SUSD1-204ENST00000374270 U2AF1L5P0DN76 240 aaPredicted RBP26.11■■□□□ 1.77
SUSD1-204ENST00000374270 U2AF1Q01081 240 aaKnown RBP eCLIP26.11■■□□□ 1.77
SUSD1-204ENST00000374270 NOP58Q9Y2X3 529 aaKnown RBP26.11■■□□□ 1.77
SUSD1-204ENST00000374270 ERVK-7P63135 1459 aa26.11■■□□□ 1.77
SUSD1-204ENST00000374270 VGFO15240 615 aaPredicted RBP26.11■■□□□ 1.77
SUSD1-204ENST00000374270 FBLN1P23142 703 aa26.11■■□□□ 1.77
SUSD1-204ENST00000374270 ASXL1Q8IXJ9 1541 aa26.11■■□□□ 1.77
SUSD1-204ENST00000374270 TET3O43151 1660 aa26.1■■□□□ 1.77
SUSD1-204ENST00000374270 INO80Q9ULG1 1556 aaPredicted RBP26.1■■□□□ 1.77
SUSD1-204ENST00000374270 PDE4AP27815 886 aa26.09■■□□□ 1.77
SUSD1-204ENST00000374270 BLMP54132 1417 aaPredicted RBP26.09■■□□□ 1.77
SUSD1-204ENST00000374270 POGZQ7Z3K3 1410 aa26.09■■□□□ 1.77
SUSD1-204ENST00000374270 SLFN5Q08AF3 891 aa26.08■■□□□ 1.77
SUSD1-204ENST00000374270 YEATS2Q9ULM3 1422 aa26.07■■□□□ 1.76
SUSD1-204ENST00000374270 KIDINS220Q9ULH0 1771 aa26.07■■□□□ 1.76
SUSD1-204ENST00000374270 ZBTB47Q9UFB7 747 aaPredicted RBP26.07■■□□□ 1.76
SUSD1-204ENST00000374270 CLUAP1Q96AJ1 413 aa26.07■■□□□ 1.76
SUSD1-204ENST00000374270 PRAM1Q96QH2 718 aa26.06■■□□□ 1.76
SUSD1-204ENST00000374270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.05■■□□□ 1.76
SUSD1-204ENST00000374270 CEP152O94986 1710 aa26.05■■□□□ 1.76
SUSD1-204ENST00000374270 PPRC1Q5VV67 1664 aaKnown RBP26.04■■□□□ 1.76
SUSD1-204ENST00000374270 ARAP3Q8WWN8 1544 aa26.04■■□□□ 1.76
SUSD1-204ENST00000374270 TCP11L2Q8N4U5 519 aa26.04■■□□□ 1.76
SUSD1-204ENST00000374270 PANK1Q8TE04 598 aa26.04■■□□□ 1.76
SUSD1-204ENST00000374270 LAS1LQ9Y4W2 734 aaKnown RBP26.03■■□□□ 1.76
SUSD1-204ENST00000374270 EVC2Q86UK5 1308 aa26.03■■□□□ 1.76
SUSD1-204ENST00000374270 COG6Q9Y2V7 657 aa26.03■■□□□ 1.76
SUSD1-204ENST00000374270 EFCAB6Q5THR3 1501 aa26.02■■□□□ 1.76
SUSD1-204ENST00000374270 MROH1Q8NDA8 1641 aa26.02■■□□□ 1.76
SUSD1-204ENST00000374270 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.02■■□□□ 1.76
SUSD1-204ENST00000374270 ABCA6Q8N139 1617 aa26.02■■□□□ 1.76
SUSD1-204ENST00000374270 RNF17Q9BXT8 1623 aaKnown RBP26■■□□□ 1.75
SUSD1-204ENST00000374270 CGNL1Q0VF96 1302 aa26■■□□□ 1.75
SUSD1-204ENST00000374270 WAPLQ7Z5K2 1190 aa26■■□□□ 1.75
SUSD1-204ENST00000374270 WWC1Q8IX03 1113 aa25.99■■□□□ 1.75
SUSD1-204ENST00000374270 SLC4A3P48751 1232 aa25.99■■□□□ 1.75
SUSD1-204ENST00000374270 TNNQ9UQP3 1299 aa25.99■■□□□ 1.75
SUSD1-204ENST00000374270 LAMC1P11047 1609 aa25.98■■□□□ 1.75
SUSD1-204ENST00000374270 NUTM2FA1L443 756 aa25.98■■□□□ 1.75
SUSD1-204ENST00000374270 TCERG1O14776 1098 aaKnown RBP25.98■■□□□ 1.75
SUSD1-204ENST00000374270 CFAP53Q96M91 514 aa25.98■■□□□ 1.75
SUSD1-204ENST00000374270 IQGAP1P46940 1657 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms