RNA–Protein interactions for RNA: ENST00000374000.8

PHF20-202, Transcript of PHD finger protein 20, humanhuman

TSL 1 (best)

Gene PHF20, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-202ENST00000374000 CHIC2Q9UKJ5 165 aa18.01■□□□□ 0.47
PHF20-202ENST00000374000 BCANQ96GW7 911 aa18■□□□□ 0.47
PHF20-202ENST00000374000 LRP6O75581 1613 aa17.99■□□□□ 0.47
PHF20-202ENST00000374000 COL16A1Q07092 1604 aaPredicted RBP17.98■□□□□ 0.47
PHF20-202ENST00000374000 ZFYVE9O95405 1425 aa17.97■□□□□ 0.47
PHF20-202ENST00000374000 ANKRD30AQ9BXX3 1397 aa17.97■□□□□ 0.47
PHF20-202ENST00000374000 SLC52A1Q9NWF4 448 aa17.96■□□□□ 0.47
PHF20-202ENST00000374000 FGD6Q6ZV73 1430 aa17.96■□□□□ 0.47
PHF20-202ENST00000374000 PLEKHG1Q9ULL1 1385 aa17.96■□□□□ 0.47
PHF20-202ENST00000374000 CHD2O14647 1828 aaKnown RBP17.94■□□□□ 0.46
PHF20-202ENST00000374000 RIMS2Q9UQ26 1411 aa17.94■□□□□ 0.46
PHF20-202ENST00000374000 UPF1Q92900 1129 aaKnown RBP eCLIP17.93■□□□□ 0.465e-6■■■■□ 20.6
PHF20-202ENST00000374000 MYO5BQ9ULV0 1848 aa17.92■□□□□ 0.46
PHF20-202ENST00000374000 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
PHF20-202ENST00000374000 SPATA31A6Q5VVP1 1343 aa17.91■□□□□ 0.46
PHF20-202ENST00000374000 PPP1R15AO75807 674 aaPredicted RBP17.91■□□□□ 0.46
PHF20-202ENST00000374000 MEX3CQ5U5Q3 659 aaKnown RBP17.9■□□□□ 0.46
PHF20-202ENST00000374000 TBX22Q9Y458 520 aa17.9■□□□□ 0.46
PHF20-202ENST00000374000 GCC2Q8IWJ2 1684 aa17.89■□□□□ 0.46
PHF20-202ENST00000374000 TMEM131LA2VDJ0 1609 aa17.89■□□□□ 0.45
PHF20-202ENST00000374000 NCOA3Q9Y6Q9 1424 aa17.89■□□□□ 0.45
PHF20-202ENST00000374000 ADGRL2O95490 1459 aa17.89■□□□□ 0.45
PHF20-202ENST00000374000 RPRD2Q5VT52 1461 aaKnown RBP17.89■□□□□ 0.45
PHF20-202ENST00000374000 ADAMTS13Q76LX8 1427 aa17.88■□□□□ 0.45
PHF20-202ENST00000374000 AHDC1Q5TGY3 1603 aaPredicted RBP17.88■□□□□ 0.45
PHF20-202ENST00000374000 NUTM2DQ5VT03 806 aaPredicted RBP17.88■□□□□ 0.45
PHF20-202ENST00000374000 ZNF772Q68DY9 489 aaPredicted RBP17.88■□□□□ 0.45
PHF20-202ENST00000374000 C14orf37Q86TY3 774 aa17.88■□□□□ 0.45
PHF20-202ENST00000374000 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.87■□□□□ 0.45
PHF20-202ENST00000374000 SHPRHQ149N8 1683 aa17.85■□□□□ 0.45
PHF20-202ENST00000374000 HDGFP51858 240 aaKnown RBP17.85■□□□□ 0.45
PHF20-202ENST00000374000 ANKRD50Q9ULJ7 1429 aa17.85■□□□□ 0.45
PHF20-202ENST00000374000 CHGAP10645 457 aaKnown RBP17.84■□□□□ 0.45
PHF20-202ENST00000374000 CADPS2Q86UW7 1296 aa17.84■□□□□ 0.45
PHF20-202ENST00000374000 C19orf44Q9H6X5 657 aa17.84■□□□□ 0.45
PHF20-202ENST00000374000 DIP2AQ14689 1571 aa17.84■□□□□ 0.45
PHF20-202ENST00000374000 ATF3P18847 181 aa17.84■□□□□ 0.45
PHF20-202ENST00000374000 APLP2Q06481 763 aa17.83■□□□□ 0.44
PHF20-202ENST00000374000 BRINP3Q76B58 766 aa17.83■□□□□ 0.44
PHF20-202ENST00000374000 RXRBP28702 533 aa17.82■□□□□ 0.44
PHF20-202ENST00000374000 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.82■□□□□ 0.44
PHF20-202ENST00000374000 PTPRUQ92729 1446 aa17.82■□□□□ 0.44
PHF20-202ENST00000374000 NUTM2BA6NNL0 878 aaPredicted RBP17.82■□□□□ 0.44
PHF20-202ENST00000374000 NUTM2EB1AL46 878 aaPredicted RBP17.82■□□□□ 0.44
PHF20-202ENST00000374000 NUTM2AQ8IVF1 878 aaPredicted RBP17.82■□□□□ 0.44
PHF20-202ENST00000374000 PIK3R4Q99570 1358 aa17.8■□□□□ 0.44
PHF20-202ENST00000374000 FAM50AQ14320 339 aaKnown RBP17.79■□□□□ 0.44
PHF20-202ENST00000374000 AMOTL2Q9Y2J4 779 aa17.79■□□□□ 0.44
PHF20-202ENST00000374000 AFF2P51816 1311 aa17.78■□□□□ 0.44
PHF20-202ENST00000374000 CDK12Q9NYV4 1490 aaPredicted RBP17.78■□□□□ 0.44
PHF20-202ENST00000374000 UNC13BO14795 1591 aa17.77■□□□□ 0.44
PHF20-202ENST00000374000 E9PCH4 1651 aa17.77■□□□□ 0.43
PHF20-202ENST00000374000 TRPM2O94759 1503 aa17.76■□□□□ 0.43
PHF20-202ENST00000374000 ASXL1Q8IXJ9 1541 aa17.76■□□□□ 0.43
PHF20-202ENST00000374000 SETD5Q9C0A6 1442 aa17.75■□□□□ 0.43
PHF20-202ENST00000374000 MST1RQ04912 1400 aa17.74■□□□□ 0.43
PHF20-202ENST00000374000 RGS12O14924 1447 aa17.73■□□□□ 0.43
PHF20-202ENST00000374000 DCCP43146 1447 aa17.73■□□□□ 0.43
PHF20-202ENST00000374000 DDX17Q92841 729 aaKnown RBP17.73■□□□□ 0.43
PHF20-202ENST00000374000 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
PHF20-202ENST00000374000 NRXN3Q9Y4C0 1643 aa17.72■□□□□ 0.43
PHF20-202ENST00000374000 NHSL1Q5SYE7 1610 aa17.71■□□□□ 0.43
PHF20-202ENST00000374000 C8orf37Q96NL8 207 aa17.7■□□□□ 0.42
PHF20-202ENST00000374000 PNPLA6Q8IY17 1366 aa17.7■□□□□ 0.42
PHF20-202ENST00000374000 QTRT2Q9H974 415 aaKnown RBP17.7■□□□□ 0.42
PHF20-202ENST00000374000 IQGAP3Q86VI3 1631 aa17.69■□□□□ 0.42
PHF20-202ENST00000374000 METP08581 1390 aa17.69■□□□□ 0.42
PHF20-202ENST00000374000 LRRC59Q96AG4 307 aaKnown RBP17.68■□□□□ 0.42
PHF20-202ENST00000374000 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
PHF20-202ENST00000374000 SETBP1Q9Y6X0 1596 aa17.67■□□□□ 0.42
PHF20-202ENST00000374000 NUP155O75694 1391 aa17.65■□□□□ 0.42
PHF20-202ENST00000374000 ADGRL3Q9HAR2 1447 aa17.65■□□□□ 0.42
PHF20-202ENST00000374000 ROCK1Q13464 1354 aa17.63■□□□□ 0.41
PHF20-202ENST00000374000 ADAMTS2O95450 1211 aa17.63■□□□□ 0.41
PHF20-202ENST00000374000 NALCNQ8IZF0 1738 aa17.62■□□□□ 0.41
PHF20-202ENST00000374000 NGLY1Q96IV0 654 aa17.61■□□□□ 0.41
PHF20-202ENST00000374000 ZNF326Q5BKZ1 582 aaKnown RBP17.61■□□□□ 0.41
PHF20-202ENST00000374000 C1orf167Q5SNV9 1468 aa17.6■□□□□ 0.41
PHF20-202ENST00000374000 SRCAPQ6ZRS2 3230 aa17.58■□□□□ 0.4
PHF20-202ENST00000374000 ORAI2Q96SN7 254 aa17.57■□□□□ 0.4
PHF20-202ENST00000374000 ATAD2Q6PL18 1390 aa17.57■□□□□ 0.4
PHF20-202ENST00000374000 SPHKAPQ2M3C7 1700 aa17.57■□□□□ 0.4
PHF20-202ENST00000374000 NEXMIFQ5QGS0 1516 aa17.56■□□□□ 0.4
PHF20-202ENST00000374000 USP21Q9UK80 565 aa17.56■□□□□ 0.4
PHF20-202ENST00000374000 SOS2Q07890 1332 aaPredicted RBP17.56■□□□□ 0.4
PHF20-202ENST00000374000 LAMC1P11047 1609 aa17.56■□□□□ 0.4
PHF20-202ENST00000374000 ITGAEP38570 1179 aa17.55■□□□□ 0.4
PHF20-202ENST00000374000 TRPC5Q9UL62 973 aaPredicted RBP17.54■□□□□ 0.4
PHF20-202ENST00000374000 CLTCL1P53675 1640 aa17.54■□□□□ 0.4
PHF20-202ENST00000374000 ATRNO75882 1429 aa17.53■□□□□ 0.4
PHF20-202ENST00000374000 ROBO2Q9HCK4 1378 aa17.53■□□□□ 0.4
PHF20-202ENST00000374000 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
PHF20-202ENST00000374000 PTCH1Q13635 1447 aa17.52■□□□□ 0.39
PHF20-202ENST00000374000 ZRANB1Q9UGI0 708 aa17.49■□□□□ 0.39
PHF20-202ENST00000374000 COL22A1Q8NFW1 1626 aaPredicted RBP17.49■□□□□ 0.39
PHF20-202ENST00000374000 MYOM2P54296 1465 aa17.48■□□□□ 0.39
PHF20-202ENST00000374000 BCL9LQ86UU0 1499 aa17.47■□□□□ 0.39
PHF20-202ENST00000374000 PRAG1Q86YV5 1406 aa17.45■□□□□ 0.38
PHF20-202ENST00000374000 PXDNQ92626 1479 aa17.43■□□□□ 0.38
PHF20-202ENST00000374000 EP400Q96L91 3159 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms