RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 ST20-MTHFSA0A0A6YYL1 179 aa10.7□□□□□ -0.7
PTPRT-204ENST00000373190 INTS3Q68E01 1043 aaKnown RBP10.7□□□□□ -0.7
PTPRT-204ENST00000373190 RRP9O43818 475 aaKnown RBP10.69□□□□□ -0.7
PTPRT-204ENST00000373190 CDR1P51861 262 aa10.69□□□□□ -0.7
PTPRT-204ENST00000373190 RRP12Q5JTH9 1297 aaKnown RBP10.69□□□□□ -0.7
PTPRT-204ENST00000373190 NGEFQ8N5V2 710 aa10.69□□□□□ -0.7
PTPRT-204ENST00000373190 CCDC173Q0VFZ6 552 aa10.69□□□□□ -0.7
PTPRT-204ENST00000373190 APPP05067 770 aa10.69□□□□□ -0.7
PTPRT-204ENST00000373190 AKAP17AQ02040 695 aaKnown RBP10.68□□□□□ -0.7
PTPRT-204ENST00000373190 NAT10Q9H0A0 1025 aaKnown RBP10.68□□□□□ -0.7
PTPRT-204ENST00000373190 CECR2Q9BXF3 1484 aa10.68□□□□□ -0.7
PTPRT-204ENST00000373190 IL27Q8NEV9 243 aa10.68□□□□□ -0.7
PTPRT-204ENST00000373190 KAT6BQ8WYB5 2073 aa10.68□□□□□ -0.7
PTPRT-204ENST00000373190 TOP2AP11388 1531 aaKnown RBP10.68□□□□□ -0.7
PTPRT-204ENST00000373190 TOMM22Q9NS69 142 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 TRAK2O60296 914 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 ZNF330Q9Y3S2 320 aaPredicted RBP10.67□□□□□ -0.7
PTPRT-204ENST00000373190 RDXP35241 583 aaKnown RBP10.67□□□□□ -0.7
PTPRT-204ENST00000373190 CNTLNQ9NXG0 1405 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 UACAQ9BZF9 1416 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 ERCC6Q03468 1493 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 CARMIL2Q6F5E8 1435 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 RNF20Q5VTR2 975 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 H0YHG0 523 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 PAK3O75914 559 aaPredicted RBP10.67□□□□□ -0.7
PTPRT-204ENST00000373190 DZIP1LQ8IYY4 767 aaKnown RBP10.67□□□□□ -0.7
PTPRT-204ENST00000373190 PRM3Q9NNZ6 103 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 SMARCA2P51531 1590 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 ANO2Q9NQ90 1003 aa10.67□□□□□ -0.7
PTPRT-204ENST00000373190 MBD3O95983 291 aa10.66□□□□□ -0.7
PTPRT-204ENST00000373190 RAPGEF2Q9Y4G8 1499 aa10.66□□□□□ -0.7
PTPRT-204ENST00000373190 LRRFIP1Q32MZ4 808 aaKnown RBP10.66□□□□□ -0.7
PTPRT-204ENST00000373190 MROH2BQ7Z745 1585 aa10.66□□□□□ -0.7
PTPRT-204ENST00000373190 DCTN1Q14203 1278 aa10.66□□□□□ -0.7
PTPRT-204ENST00000373190 ERCC4Q92889 916 aaPredicted RBP10.66□□□□□ -0.7
PTPRT-204ENST00000373190 LETM1O95202 739 aaPredicted RBP10.66□□□□□ -0.7
PTPRT-204ENST00000373190 CPLX2Q6PUV4 134 aaKnown RBP10.66□□□□□ -0.7
PTPRT-204ENST00000373190 CCDC73Q6ZRK6 1079 aa10.66□□□□□ -0.7
PTPRT-204ENST00000373190 SMC3Q9UQE7 1217 aa10.65□□□□□ -0.7
PTPRT-204ENST00000373190 TRIM29Q14134 588 aa10.65□□□□□ -0.7
PTPRT-204ENST00000373190 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
PTPRT-204ENST00000373190 VPS37CA5D8V6 355 aaPredicted RBP10.65□□□□□ -0.7
PTPRT-204ENST00000373190 CAVIN1Q6NZI2 390 aaKnown RBP10.65□□□□□ -0.7
PTPRT-204ENST00000373190 MARCH6O60337 910 aa10.65□□□□□ -0.7
PTPRT-204ENST00000373190 PCMTD1Q96MG8 357 aaPredicted RBP10.65□□□□□ -0.7
PTPRT-204ENST00000373190 LEKR1Q6ZMV7 388 aa10.65□□□□□ -0.71
PTPRT-204ENST00000373190 PRDM2Q13029 1718 aa10.65□□□□□ -0.71
PTPRT-204ENST00000373190 CCP110O43303 1012 aa10.65□□□□□ -0.71
PTPRT-204ENST00000373190 CCDC191Q8NCU4 936 aa10.65□□□□□ -0.71
PTPRT-204ENST00000373190 PODXL2Q9NZ53 605 aa10.64□□□□□ -0.71
PTPRT-204ENST00000373190 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.64□□□□□ -0.71
PTPRT-204ENST00000373190 TAF3Q5VWG9 929 aa10.64□□□□□ -0.71
PTPRT-204ENST00000373190 SYNE3Q6ZMZ3 975 aa10.64□□□□□ -0.71
PTPRT-204ENST00000373190 CPLX1O14810 134 aa10.64□□□□□ -0.71
PTPRT-204ENST00000373190 FRAT2O75474 233 aaPredicted RBP10.64□□□□□ -0.71
PTPRT-204ENST00000373190 CUX1P39880 1505 aa10.63□□□□□ -0.71
PTPRT-204ENST00000373190 GGT6Q6P531 493 aa10.63□□□□□ -0.71
PTPRT-204ENST00000373190 RNF214Q8ND24 703 aa10.63□□□□□ -0.71
PTPRT-204ENST00000373190 VPS53Q5VIR6 699 aa10.62□□□□□ -0.71
PTPRT-204ENST00000373190 TSPY26PQ9H489 355 aa10.62□□□□□ -0.71
PTPRT-204ENST00000373190 CCDC47Q96A33 483 aaKnown RBP10.62□□□□□ -0.71
PTPRT-204ENST00000373190 FHOD3Q2V2M9 1422 aa10.62□□□□□ -0.71
PTPRT-204ENST00000373190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.61□□□□□ -0.71
PTPRT-204ENST00000373190 TRIM5Q9C035 493 aa10.61□□□□□ -0.71
PTPRT-204ENST00000373190 CDC45O75419 566 aa10.61□□□□□ -0.71
PTPRT-204ENST00000373190 RBM10P98175 930 aaKnown RBP10.61□□□□□ -0.71
PTPRT-204ENST00000373190 FBXW7Q969H0 707 aa10.61□□□□□ -0.71
PTPRT-204ENST00000373190 API5Q9BZZ5 524 aaKnown RBP10.61□□□□□ -0.71
PTPRT-204ENST00000373190 CCDC7Q96M83 1385 aa10.61□□□□□ -0.71
PTPRT-204ENST00000373190 APAF1O14727 1248 aa10.6□□□□□ -0.71
PTPRT-204ENST00000373190 KIF7Q2M1P5 1343 aa10.6□□□□□ -0.71
PTPRT-204ENST00000373190 GRPEL1Q9HAV7 217 aa10.6□□□□□ -0.71
PTPRT-204ENST00000373190 UQCRHLA0A096LP55 91 aa10.6□□□□□ -0.71
PTPRT-204ENST00000373190 UQCRHP07919 91 aa10.6□□□□□ -0.71
PTPRT-204ENST00000373190 CSB-PGBD3P0DP91 1061 aa10.6□□□□□ -0.71
PTPRT-204ENST00000373190 NAP1L1P55209 391 aaKnown RBP10.6□□□□□ -0.71
PTPRT-204ENST00000373190 NINLQ9Y2I6 1382 aa10.6□□□□□ -0.71
PTPRT-204ENST00000373190 OLFM4Q6UX06 510 aa10.6□□□□□ -0.71
PTPRT-204ENST00000373190 RSPH4AQ5TD94 716 aa10.6□□□□□ -0.71
PTPRT-204ENST00000373190 TMX4Q9H1E5 349 aaPredicted RBP10.6□□□□□ -0.71
PTPRT-204ENST00000373190 AMPHP49418 695 aa10.6□□□□□ -0.71
PTPRT-204ENST00000373190 BRD4O60885 1362 aaPredicted RBP10.59□□□□□ -0.71
PTPRT-204ENST00000373190 IFIT2P09913 472 aaKnown RBP10.59□□□□□ -0.71
PTPRT-204ENST00000373190 CAGE1Q8TC20 777 aa10.59□□□□□ -0.71
PTPRT-204ENST00000373190 BCL11BQ9C0K0 894 aaPredicted RBP10.59□□□□□ -0.71
PTPRT-204ENST00000373190 ELL2O00472 640 aaPredicted RBP10.59□□□□□ -0.71
PTPRT-204ENST00000373190 LNPKQ9C0E8 428 aa10.59□□□□□ -0.71
PTPRT-204ENST00000373190 MCM2P49736 904 aa10.59□□□□□ -0.71
PTPRT-204ENST00000373190 C9orf78Q9NZ63 289 aaPredicted RBP10.58□□□□□ -0.72
PTPRT-204ENST00000373190 DHX8Q14562 1220 aaKnown RBP10.58□□□□□ -0.72
PTPRT-204ENST00000373190 TRDNQ13061 729 aa10.58□□□□□ -0.72
PTPRT-204ENST00000373190 EVC2Q86UK5 1308 aa10.58□□□□□ -0.72
PTPRT-204ENST00000373190 MYO6Q9UM54 1294 aa10.58□□□□□ -0.72
PTPRT-204ENST00000373190 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.58□□□□□ -0.72
PTPRT-204ENST00000373190 ERC2O15083 957 aa10.58□□□□□ -0.72
PTPRT-204ENST00000373190 RUNDC1Q96C34 613 aa10.57□□□□□ -0.72
PTPRT-204ENST00000373190 RABEP1Q15276 862 aa10.57□□□□□ -0.72
PTPRT-204ENST00000373190 NEXNQ0ZGT2 675 aa10.57□□□□□ -0.72
PTPRT-204ENST00000373190 ESPNB1AK53 854 aa10.57□□□□□ -0.72
PTPRT-204ENST00000373190 CCDC9Q9Y3X0 531 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms