RNA–Protein interactions for RNA: ENST00000373034.8

PCDH19-202, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 9,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-202ENST00000373034 PKNOX2Q96KN3 472 aa18.68■□□□□ 0.58
PCDH19-202ENST00000373034 ROCK1Q13464 1354 aa18.68■□□□□ 0.58
PCDH19-202ENST00000373034 TNIKQ9UKE5 1360 aa18.68■□□□□ 0.58
PCDH19-202ENST00000373034 LETM1O95202 739 aaPredicted RBP18.68■□□□□ 0.58
PCDH19-202ENST00000373034 TSPYL1Q9H0U9 437 aa18.68■□□□□ 0.58
PCDH19-202ENST00000373034 HMGN5P82970 282 aaKnown RBP18.67■□□□□ 0.58
PCDH19-202ENST00000373034 TERF2IPQ9NYB0 399 aa18.67■□□□□ 0.58
PCDH19-202ENST00000373034 NASPP49321 788 aaPredicted RBP18.67■□□□□ 0.58
PCDH19-202ENST00000373034 DHX8Q14562 1220 aaKnown RBP18.67■□□□□ 0.58
PCDH19-202ENST00000373034 ANKRD45Q5TZF3 282 aa18.67■□□□□ 0.58
PCDH19-202ENST00000373034 CTDP1Q9Y5B0 961 aaPredicted RBP18.67■□□□□ 0.58
PCDH19-202ENST00000373034 HSPA5P11021 654 aaKnown RBP18.66■□□□□ 0.58
PCDH19-202ENST00000373034 TRDNQ13061 729 aa18.66■□□□□ 0.58
PCDH19-202ENST00000373034 FANCIQ9NVI1 1328 aa18.65■□□□□ 0.58
PCDH19-202ENST00000373034 PDE4AP27815 886 aa18.65■□□□□ 0.58
PCDH19-202ENST00000373034 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
PCDH19-202ENST00000373034 CHMP5Q9NZZ3 219 aa18.65■□□□□ 0.58
PCDH19-202ENST00000373034 OFD1O75665 1012 aa18.65■□□□□ 0.58
PCDH19-202ENST00000373034 ERICH2A1L162 156 aa18.64■□□□□ 0.58
PCDH19-202ENST00000373034 SAFB2Q14151 953 aaKnown RBP eCLIP18.64■□□□□ 0.57
PCDH19-202ENST00000373034 SAFBQ15424 915 aaKnown RBP eCLIP18.64■□□□□ 0.57
PCDH19-202ENST00000373034 SMARCE1Q969G3 411 aa18.64■□□□□ 0.57
PCDH19-202ENST00000373034 GTF2E1P29083 439 aaPredicted RBP18.63■□□□□ 0.57
PCDH19-202ENST00000373034 AXDND1Q5T1B0 1012 aaPredicted RBP18.63■□□□□ 0.57
PCDH19-202ENST00000373034 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
PCDH19-202ENST00000373034 KIF15Q9NS87 1388 aa18.62■□□□□ 0.57
PCDH19-202ENST00000373034 SEPT7Q16181 437 aaKnown RBP18.62■□□□□ 0.57
PCDH19-202ENST00000373034 KAT6BQ8WYB5 2073 aa18.62■□□□□ 0.57
PCDH19-202ENST00000373034 ZFYVE27Q5T4F4 411 aa18.62■□□□□ 0.57
PCDH19-202ENST00000373034 NLRP13Q86W25 1043 aa18.62■□□□□ 0.57
PCDH19-202ENST00000373034 CLUAP1Q96AJ1 413 aa18.62■□□□□ 0.57
PCDH19-202ENST00000373034 DEF6Q9H4E7 631 aa18.61■□□□□ 0.57
PCDH19-202ENST00000373034 BRMS1Q9HCU9 246 aa18.61■□□□□ 0.57
PCDH19-202ENST00000373034 ANO2Q9NQ90 1003 aa18.61■□□□□ 0.57
PCDH19-202ENST00000373034 MRE11P49959 708 aa18.61■□□□□ 0.57
PCDH19-202ENST00000373034 R3HCC1Q9Y3T6 440 aaKnown RBP18.61■□□□□ 0.57
PCDH19-202ENST00000373034 KIF7Q2M1P5 1343 aa18.61■□□□□ 0.57
PCDH19-202ENST00000373034 MYO15BQ96JP2 1530 aa18.6■□□□□ 0.57
PCDH19-202ENST00000373034 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
PCDH19-202ENST00000373034 SMC3Q9UQE7 1217 aa18.59■□□□□ 0.57
PCDH19-202ENST00000373034 RABEP1Q15276 862 aa18.59■□□□□ 0.57
PCDH19-202ENST00000373034 TXLNBQ8N3L3 684 aa18.59■□□□□ 0.57
PCDH19-202ENST00000373034 EIF3JO75822 258 aaKnown RBP18.58■□□□□ 0.57
PCDH19-202ENST00000373034 EZRP15311 586 aaKnown RBP18.58■□□□□ 0.57
PCDH19-202ENST00000373034 NEFHP12036 1026 aa18.58■□□□□ 0.56
PCDH19-202ENST00000373034 STK26Q9P289 416 aa18.58■□□□□ 0.56
PCDH19-202ENST00000373034 PDILTQ8N807 584 aa18.57■□□□□ 0.56
PCDH19-202ENST00000373034 ENOX2Q16206 610 aaKnown RBP18.57■□□□□ 0.56
PCDH19-202ENST00000373034 LUC7LQ9NQ29 371 aaKnown RBP18.57■□□□□ 0.56
PCDH19-202ENST00000373034 XBP1P17861 261 aa18.56■□□□□ 0.56
PCDH19-202ENST00000373034 NFXL1Q6ZNB6 911 aa18.56■□□□□ 0.56
PCDH19-202ENST00000373034 INTS3Q68E01 1043 aaKnown RBP18.56■□□□□ 0.56
PCDH19-202ENST00000373034 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.56■□□□□ 0.56
PCDH19-202ENST00000373034 IQCEQ6IPM2 695 aa18.55■□□□□ 0.56
PCDH19-202ENST00000373034 PODXL2Q9NZ53 605 aa18.55■□□□□ 0.56
PCDH19-202ENST00000373034 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
PCDH19-202ENST00000373034 ZKSCAN2Q63HK3 967 aa18.55■□□□□ 0.56
PCDH19-202ENST00000373034 CLASRPQ8N2M8 674 aaKnown RBP18.55■□□□□ 0.56
PCDH19-202ENST00000373034 E9PSI1 815 aa18.54■□□□□ 0.56
PCDH19-202ENST00000373034 CAVIN1Q6NZI2 390 aaKnown RBP18.54■□□□□ 0.56
PCDH19-202ENST00000373034 FILIP1LQ4L180 1135 aa18.54■□□□□ 0.56
PCDH19-202ENST00000373034 VPS37CA5D8V6 355 aaPredicted RBP18.53■□□□□ 0.56
PCDH19-202ENST00000373034 DDX19BQ9UMR2 479 aa18.53■□□□□ 0.56
PCDH19-202ENST00000373034 SYCP1Q15431 976 aa18.53■□□□□ 0.56
PCDH19-202ENST00000373034 DHX16O60231 1041 aaKnown RBP18.53■□□□□ 0.56
PCDH19-202ENST00000373034 GBP2P32456 591 aaPredicted RBP18.53■□□□□ 0.56
PCDH19-202ENST00000373034 RAD21O60216 631 aa18.52■□□□□ 0.56
PCDH19-202ENST00000373034 VPS37DQ86XT2 251 aa18.52■□□□□ 0.56
PCDH19-202ENST00000373034 CCDC146Q8IYE0 955 aa18.52■□□□□ 0.56
PCDH19-202ENST00000373034 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
PCDH19-202ENST00000373034 AMPHP49418 695 aa18.51■□□□□ 0.55
PCDH19-202ENST00000373034 C9orf78Q9NZ63 289 aaPredicted RBP18.51■□□□□ 0.55
PCDH19-202ENST00000373034 MAGEC2Q9UBF1 373 aaPredicted RBP18.51■□□□□ 0.55
PCDH19-202ENST00000373034 ERLIN1O75477 346 aa18.51■□□□□ 0.55
PCDH19-202ENST00000373034 TRIM5Q9C035 493 aa18.51■□□□□ 0.55
PCDH19-202ENST00000373034 IFIT2P09913 472 aaKnown RBP18.51■□□□□ 0.55
PCDH19-202ENST00000373034 FBXW7Q969H0 707 aa18.51■□□□□ 0.55
PCDH19-202ENST00000373034 NINLQ9Y2I6 1382 aa18.51■□□□□ 0.55
PCDH19-202ENST00000373034 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
PCDH19-202ENST00000373034 KINO60870 393 aaKnown RBP18.49■□□□□ 0.55
PCDH19-202ENST00000373034 RRP1P56182 461 aaKnown RBP18.49■□□□□ 0.55
PCDH19-202ENST00000373034 SDF4Q9BRK5 362 aa18.49■□□□□ 0.55
PCDH19-202ENST00000373034 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
PCDH19-202ENST00000373034 ZNHIT6Q9NWK9 470 aaKnown RBP18.49■□□□□ 0.55
PCDH19-202ENST00000373034 MBD3O95983 291 aa18.49■□□□□ 0.55
PCDH19-202ENST00000373034 SLC4A3P48751 1232 aa18.49■□□□□ 0.55
PCDH19-202ENST00000373034 TTLL5Q6EMB2 1281 aa18.48■□□□□ 0.55
PCDH19-202ENST00000373034 SKIDA1Q1XH10 827 aa18.48■□□□□ 0.55
PCDH19-202ENST00000373034 WWC2Q6AWC2 1192 aa18.48■□□□□ 0.55
PCDH19-202ENST00000373034 ERC2O15083 957 aa18.48■□□□□ 0.55
PCDH19-202ENST00000373034 BAZ1BQ9UIG0 1483 aaKnown RBP18.48■□□□□ 0.55
PCDH19-202ENST00000373034 SMC2O95347 1197 aa18.47■□□□□ 0.55
PCDH19-202ENST00000373034 PSMA5P28066 241 aa18.47■□□□□ 0.55
PCDH19-202ENST00000373034 TXLNAP40222 546 aa18.47■□□□□ 0.55
PCDH19-202ENST00000373034 ANKRD62A6NC57 917 aa18.47■□□□□ 0.55
PCDH19-202ENST00000373034 CCDC9Q9Y3X0 531 aaKnown RBP18.47■□□□□ 0.55
PCDH19-202ENST00000373034 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.47■□□□□ 0.55
PCDH19-202ENST00000373034 C1orf141Q5JVX7 400 aa18.47■□□□□ 0.55
PCDH19-202ENST00000373034 AAMPQ13685 434 aa18.47■□□□□ 0.55
PCDH19-202ENST00000373034 GIMAP7Q8NHV1 300 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms