RNA–Protein interactions for RNA: ENST00000370888.5

LRRC1-202, Transcript of leucine rich repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-202ENST00000370888 SPINK5Q9NQ38 1064 aaPredicted RBP25.5■■□□□ 1.67
LRRC1-202ENST00000370888 SLC4A3P48751 1232 aa25.49■■□□□ 1.67
LRRC1-202ENST00000370888 SCAF11Q99590 1463 aaKnown RBP25.47■■□□□ 1.67
LRRC1-202ENST00000370888 RGS3P49796 1198 aa25.46■■□□□ 1.67
LRRC1-202ENST00000370888 MADDQ8WXG6 1647 aa25.46■■□□□ 1.67
LRRC1-202ENST00000370888 INSRP06213 1382 aa25.46■■□□□ 1.67
LRRC1-202ENST00000370888 RNF17Q9BXT8 1623 aaKnown RBP25.45■■□□□ 1.66
LRRC1-202ENST00000370888 ABCC1P33527 1531 aa25.44■■□□□ 1.66
LRRC1-202ENST00000370888 BCAR3O75815 825 aa25.44■■□□□ 1.66
LRRC1-202ENST00000370888 TNNT2P45379 298 aaPredicted RBP25.43■■□□□ 1.66
LRRC1-202ENST00000370888 ZNF521Q96K83 1311 aa25.43■■□□□ 1.66
LRRC1-202ENST00000370888 CHGAP10645 457 aaKnown RBP25.43■■□□□ 1.66
LRRC1-202ENST00000370888 SLFN5Q08AF3 891 aa25.42■■□□□ 1.66
LRRC1-202ENST00000370888 KDM2BQ8NHM5 1336 aa25.42■■□□□ 1.66
LRRC1-202ENST00000370888 SHROOM2Q13796 1616 aa25.42■■□□□ 1.66
LRRC1-202ENST00000370888 ADGRF5Q8IZF2 1346 aa25.42■■□□□ 1.66
LRRC1-202ENST00000370888 ZCCHC11Q5TAX3 1644 aaKnown RBP25.41■■□□□ 1.66
LRRC1-202ENST00000370888 DMRT2Q9Y5R5 561 aa25.41■■□□□ 1.66
LRRC1-202ENST00000370888 ASXL1Q8IXJ9 1541 aa25.41■■□□□ 1.66
LRRC1-202ENST00000370888 CENPQQ7L2Z9 268 aaPredicted RBP25.4■■□□□ 1.66
LRRC1-202ENST00000370888 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.4■■□□□ 1.66
LRRC1-202ENST00000370888 CARD14Q9BXL6 1004 aa25.39■■□□□ 1.66
LRRC1-202ENST00000370888 CLTCL1P53675 1640 aa25.39■■□□□ 1.65
LRRC1-202ENST00000370888 NEUROD2Q15784 382 aa25.38■■□□□ 1.65
LRRC1-202ENST00000370888 EIF3AQ14152 1382 aaKnown RBP25.38■■□□□ 1.65
LRRC1-202ENST00000370888 TRPM2O94759 1503 aa25.38■■□□□ 1.65
LRRC1-202ENST00000370888 KANK1Q14678 1352 aa25.37■■□□□ 1.65
LRRC1-202ENST00000370888 UGGT1Q9NYU2 1555 aa25.37■■□□□ 1.65
LRRC1-202ENST00000370888 IQGAP1P46940 1657 aa25.37■■□□□ 1.65
LRRC1-202ENST00000370888 SCAPERQ9BY12 1400 aa25.37■■□□□ 1.65
LRRC1-202ENST00000370888 SYNMO15061 1565 aa25.34■■□□□ 1.65
LRRC1-202ENST00000370888 PTPRTO14522 1441 aa25.34■■□□□ 1.65
LRRC1-202ENST00000370888 ZFYVE16Q7Z3T8 1539 aa25.33■■□□□ 1.65
LRRC1-202ENST00000370888 DAXXQ9UER7 740 aaPredicted RBP25.33■■□□□ 1.65
LRRC1-202ENST00000370888 PIK3C2GO75747 1445 aa25.33■■□□□ 1.65
LRRC1-202ENST00000370888 DDRGK1Q96HY6 314 aa25.32■■□□□ 1.64
LRRC1-202ENST00000370888 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
LRRC1-202ENST00000370888 RRP7AQ9Y3A4 280 aaKnown RBP25.32■■□□□ 1.64
LRRC1-202ENST00000370888 TRAK1Q9UPV9 953 aa25.31■■□□□ 1.64
LRRC1-202ENST00000370888 SPHKAPQ2M3C7 1700 aa25.3■■□□□ 1.64
LRRC1-202ENST00000370888 CANXP27824 592 aaKnown RBP25.3■■□□□ 1.64
LRRC1-202ENST00000370888 FAM161AQ3B820 660 aa25.3■■□□□ 1.64
LRRC1-202ENST00000370888 C8orf34Q49A92 452 aa25.3■■□□□ 1.64
LRRC1-202ENST00000370888 PPM1GO15355 546 aaPredicted RBP25.28■■□□□ 1.64
LRRC1-202ENST00000370888 RTEL1-TNFRSF6BF6WH68 1400 aa25.28■■□□□ 1.64
LRRC1-202ENST00000370888 STAC3Q96MF2 364 aa25.28■■□□□ 1.64
LRRC1-202ENST00000370888 E9PSI1 815 aa25.27■■□□□ 1.64
LRRC1-202ENST00000370888 TRMT2AQ8IZ69 625 aaKnown RBP25.27■■□□□ 1.64
LRRC1-202ENST00000370888 FRAT1Q92837 279 aaPredicted RBP25.27■■□□□ 1.64
LRRC1-202ENST00000370888 FANCAO15360 1455 aa25.27■■□□□ 1.64
LRRC1-202ENST00000370888 CEP152O94986 1710 aa25.27■■□□□ 1.64
LRRC1-202ENST00000370888 NKTRP30414 1462 aaKnown RBP25.26■■□□□ 1.63
LRRC1-202ENST00000370888 ERVK-7P63135 1459 aa25.26■■□□□ 1.63
LRRC1-202ENST00000370888 PANK1Q8TE04 598 aa25.26■■□□□ 1.63
LRRC1-202ENST00000370888 MYOM1P52179 1685 aa25.26■■□□□ 1.63
LRRC1-202ENST00000370888 IGHDP01880 384 aa25.25■■□□□ 1.63
LRRC1-202ENST00000370888 TMEM132EQ6IEE7 984 aa25.25■■□□□ 1.63
LRRC1-202ENST00000370888 SLC12A5Q9H2X9 1139 aa25.25■■□□□ 1.63
LRRC1-202ENST00000370888 COG6Q9Y2V7 657 aa25.25■■□□□ 1.63
LRRC1-202ENST00000370888 NUTM2DQ5VT03 806 aaPredicted RBP25.24■■□□□ 1.63
LRRC1-202ENST00000370888 MORC1Q86VD1 984 aa25.24■■□□□ 1.63
LRRC1-202ENST00000370888 ATP7AQ04656 1500 aa25.23■■□□□ 1.63
LRRC1-202ENST00000370888 NPC1L1Q9UHC9 1359 aa25.22■■□□□ 1.63
LRRC1-202ENST00000370888 IL27Q8NEV9 243 aa25.22■■□□□ 1.63
LRRC1-202ENST00000370888 RTN4Q9NQC3 1192 aaKnown RBP25.22■■□□□ 1.63
LRRC1-202ENST00000370888 KDM5AP29375 1690 aaKnown RBP25.22■■□□□ 1.63
LRRC1-202ENST00000370888 WWC1Q8IX03 1113 aa25.21■■□□□ 1.63
LRRC1-202ENST00000370888 GGT6Q6P531 493 aa25.21■■□□□ 1.63
LRRC1-202ENST00000370888 BCL2L13Q9BXK5 485 aa25.21■■□□□ 1.63
LRRC1-202ENST00000370888 USP35Q9P2H5 1018 aa25.21■■□□□ 1.63
LRRC1-202ENST00000370888 CENPJQ9HC77 1338 aaPredicted RBP25.21■■□□□ 1.63
LRRC1-202ENST00000370888 UHRF1BP1LA0JNW5 1464 aa25.2■■□□□ 1.63
LRRC1-202ENST00000370888 ADGRL1O94910 1474 aa25.2■■□□□ 1.63
LRRC1-202ENST00000370888 TET3O43151 1660 aa25.2■■□□□ 1.62
LRRC1-202ENST00000370888 NFKBIBQ15653 356 aa25.19■■□□□ 1.62
LRRC1-202ENST00000370888 NOS1P29475 1434 aa25.18■■□□□ 1.62
LRRC1-202ENST00000370888 NSD3Q9BZ95 1437 aa25.17■■□□□ 1.62
LRRC1-202ENST00000370888 ABCA6Q8N139 1617 aa25.17■■□□□ 1.62
LRRC1-202ENST00000370888 TNNQ9UQP3 1299 aa25.15■■□□□ 1.62
LRRC1-202ENST00000370888 CLASP1Q7Z460 1538 aa25.15■■□□□ 1.62
LRRC1-202ENST00000370888 DEPDC5O75140 1603 aa25.15■■□□□ 1.62
LRRC1-202ENST00000370888 SAFB2Q14151 953 aaKnown RBP eCLIP25.14■■□□□ 1.61
LRRC1-202ENST00000370888 MAP3K4Q9Y6R4 1608 aa25.14■■□□□ 1.61
LRRC1-202ENST00000370888 TCP11L2Q8N4U5 519 aa25.13■■□□□ 1.61
LRRC1-202ENST00000370888 CLUAP1Q96AJ1 413 aa25.13■■□□□ 1.61
LRRC1-202ENST00000370888 SLC24A1O60721 1099 aa25.11■■□□□ 1.61
LRRC1-202ENST00000370888 MTHFSP49914 203 aa25.11■■□□□ 1.61
LRRC1-202ENST00000370888 CFAP65Q6ZU64 1925 aaKnown RBP25.1■■□□□ 1.61
LRRC1-202ENST00000370888 SEC24BO95487 1268 aa25.09■■□□□ 1.61
LRRC1-202ENST00000370888 INO80Q9ULG1 1556 aaPredicted RBP25.09■■□□□ 1.61
LRRC1-202ENST00000370888 CGNL1Q0VF96 1302 aa25.09■■□□□ 1.61
LRRC1-202ENST00000370888 VWDEQ8N2E2 1590 aa25.09■■□□□ 1.61
LRRC1-202ENST00000370888 MYOM2P54296 1465 aa25.09■■□□□ 1.61
LRRC1-202ENST00000370888 RUNDC1Q96C34 613 aa25.08■■□□□ 1.61
LRRC1-202ENST00000370888 POLR3AO14802 1390 aaPredicted RBP25.08■■□□□ 1.6
LRRC1-202ENST00000370888 PDE3AQ14432 1141 aa25.07■■□□□ 1.6
LRRC1-202ENST00000370888 RLBP1P12271 317 aa25.07■■□□□ 1.6
LRRC1-202ENST00000370888 MROH1Q8NDA8 1641 aa25.06■■□□□ 1.6
LRRC1-202ENST00000370888 FRAT2O75474 233 aaPredicted RBP25.06■■□□□ 1.6
LRRC1-202ENST00000370888 RARSP54136 660 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms