RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 CADPSQ9ULU8 1353 aa22.08■■□□□ 1.12
SNX27-203ENST00000368843 DHX16O60231 1041 aaKnown RBP22.07■■□□□ 1.12
SNX27-203ENST00000368843 DIAPH3Q9NSV4 1193 aa22.07■■□□□ 1.12
SNX27-203ENST00000368843 BCL11BQ9C0K0 894 aaPredicted RBP22.07■■□□□ 1.12
SNX27-203ENST00000368843 PTPRGP23470 1445 aa22.07■■□□□ 1.12
SNX27-203ENST00000368843 PDE3BQ13370 1112 aa22.06■■□□□ 1.12
SNX27-203ENST00000368843 LRRFIP1Q32MZ4 808 aaKnown RBP22.05■■□□□ 1.12
SNX27-203ENST00000368843 TPM2P07951 284 aa22.05■■□□□ 1.12
SNX27-203ENST00000368843 SAMD1Q6SPF0 538 aaPredicted RBP22.05■■□□□ 1.12
SNX27-203ENST00000368843 OSCARQ8IYS5 282 aa22.05■■□□□ 1.12
SNX27-203ENST00000368843 ATF3P18847 181 aa22.04■■□□□ 1.12
SNX27-203ENST00000368843 TSR1Q2NL82 804 aaKnown RBP22.04■■□□□ 1.12
SNX27-203ENST00000368843 PLIN1O60240 522 aa22.03■■□□□ 1.12
SNX27-203ENST00000368843 FAM69CQ0P6D2 419 aa22.03■■□□□ 1.12
SNX27-203ENST00000368843 ZKSCAN2Q63HK3 967 aa22.03■■□□□ 1.12
SNX27-203ENST00000368843 CCAR2Q8N163 923 aaKnown RBP22.02■■□□□ 1.12
SNX27-203ENST00000368843 TRIM29Q14134 588 aa22.02■■□□□ 1.12
SNX27-203ENST00000368843 IFIT2P09913 472 aaKnown RBP22.02■■□□□ 1.12
SNX27-203ENST00000368843 KRI1Q8N9T8 703 aaKnown RBP22.01■■□□□ 1.11
SNX27-203ENST00000368843 ANO2Q9NQ90 1003 aa22.01■■□□□ 1.11
SNX27-203ENST00000368843 DDX58O95786 925 aaKnown RBP22.01■■□□□ 1.11
SNX27-203ENST00000368843 DIAPH1O60610 1272 aaKnown RBP22■■□□□ 1.11
SNX27-203ENST00000368843 CNKSR2Q8WXI2 1034 aa22■■□□□ 1.11
SNX27-203ENST00000368843 RBM33Q96EV2 1170 aaKnown RBP22■■□□□ 1.11
SNX27-203ENST00000368843 E9PSI1 815 aa21.99■■□□□ 1.11
SNX27-203ENST00000368843 FOSBP53539 338 aa21.98■■□□□ 1.11
SNX27-203ENST00000368843 NUTM2GQ5VZR2 741 aa21.98■■□□□ 1.11
SNX27-203ENST00000368843 PCMTD1Q96MG8 357 aaPredicted RBP21.98■■□□□ 1.11
SNX27-203ENST00000368843 GOLGA6L19H0YKK7 550 aa21.98■■□□□ 1.11
SNX27-203ENST00000368843 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
SNX27-203ENST00000368843 CHMP4CQ96CF2 233 aa21.97■■□□□ 1.11
SNX27-203ENST00000368843 NFXL1Q6ZNB6 911 aa21.97■■□□□ 1.11
SNX27-203ENST00000368843 RUFY2Q8WXA3 655 aa21.97■■□□□ 1.11
SNX27-203ENST00000368843 RIPK4P57078 832 aa21.97■■□□□ 1.11
SNX27-203ENST00000368843 IPO9Q96P70 1041 aaKnown RBP21.96■■□□□ 1.11
SNX27-203ENST00000368843 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNX27-203ENST00000368843 CPLX2Q6PUV4 134 aaKnown RBP21.95■■□□□ 1.1
SNX27-203ENST00000368843 FYB1O15117 783 aa21.95■■□□□ 1.1
SNX27-203ENST00000368843 COG6Q9Y2V7 657 aa21.95■■□□□ 1.1
SNX27-203ENST00000368843 G3BP1Q13283 466 aaKnown RBP eCLIP21.95■■□□□ 1.1
SNX27-203ENST00000368843 FKBP5Q13451 457 aaPredicted RBP21.95■■□□□ 1.1
SNX27-203ENST00000368843 USP47Q96K76 1375 aa21.94■■□□□ 1.1
SNX27-203ENST00000368843 TPM1P09493 284 aa21.94■■□□□ 1.1
SNX27-203ENST00000368843 CENPQQ7L2Z9 268 aaPredicted RBP21.94■■□□□ 1.1
SNX27-203ENST00000368843 RAPGEF4Q8WZA2 1011 aa21.94■■□□□ 1.1
SNX27-203ENST00000368843 CRBNQ96SW2 442 aa21.93■■□□□ 1.1
SNX27-203ENST00000368843 ERICH2A1L162 156 aa21.93■■□□□ 1.1
SNX27-203ENST00000368843 TRDNQ13061 729 aa21.93■■□□□ 1.1
SNX27-203ENST00000368843 TSPYL4Q9UJ04 414 aa21.93■■□□□ 1.1
SNX27-203ENST00000368843 BECN2A8MW95 431 aa21.93■■□□□ 1.1
SNX27-203ENST00000368843 AIMP1Q12904 312 aaKnown RBP21.93■■□□□ 1.1
SNX27-203ENST00000368843 CPLX1O14810 134 aa21.93■■□□□ 1.1
SNX27-203ENST00000368843 ZNF592Q92610 1267 aa21.92■■□□□ 1.1
SNX27-203ENST00000368843 CCDC43Q96MW1 224 aaKnown RBP21.92■■□□□ 1.1
SNX27-203ENST00000368843 DDX11L8A8MPP1 907 aa21.92■■□□□ 1.1
SNX27-203ENST00000368843 KDM4AO75164 1064 aa21.92■■□□□ 1.1
SNX27-203ENST00000368843 HMOX1P09601 288 aa21.92■■□□□ 1.1
SNX27-203ENST00000368843 ATP6V1DQ9Y5K8 247 aa21.92■■□□□ 1.1
SNX27-203ENST00000368843 APAF1O14727 1248 aa21.91■■□□□ 1.1
SNX27-203ENST00000368843 RIC3Q7Z5B4 369 aa21.91■■□□□ 1.1
SNX27-203ENST00000368843 ZKSCAN1P17029 563 aaPredicted RBP21.91■■□□□ 1.1
SNX27-203ENST00000368843 CCDC27Q2M243 656 aa21.91■■□□□ 1.1
SNX27-203ENST00000368843 NLRP2Q9NX02 1062 aa21.9■■□□□ 1.1
SNX27-203ENST00000368843 CCDC47Q96A33 483 aaKnown RBP21.9■■□□□ 1.1
SNX27-203ENST00000368843 USP35Q9P2H5 1018 aa21.9■■□□□ 1.1
SNX27-203ENST00000368843 TSHZ2Q9NRE2 1034 aa21.89■■□□□ 1.1
SNX27-203ENST00000368843 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
SNX27-203ENST00000368843 DDX49Q9Y6V7 483 aaKnown RBP21.87■■□□□ 1.09
SNX27-203ENST00000368843 NEUROD6Q96NK8 337 aa21.87■■□□□ 1.09
SNX27-203ENST00000368843 DCAF8L1A6NGE4 600 aa21.86■■□□□ 1.09
SNX27-203ENST00000368843 FAM161AQ3B820 660 aa21.86■■□□□ 1.09
SNX27-203ENST00000368843 DDX19BQ9UMR2 479 aa21.86■■□□□ 1.09
SNX27-203ENST00000368843 RRP1P56182 461 aaKnown RBP21.85■■□□□ 1.09
SNX27-203ENST00000368843 EXOC6Q8TAG9 804 aa21.85■■□□□ 1.09
SNX27-203ENST00000368843 MTMR7Q9Y216 660 aa21.85■■□□□ 1.09
SNX27-203ENST00000368843 FAM177BA6PVY3 158 aa21.84■■□□□ 1.09
SNX27-203ENST00000368843 RNF20Q5VTR2 975 aa21.84■■□□□ 1.09
SNX27-203ENST00000368843 API5Q9BZZ5 524 aaKnown RBP21.84■■□□□ 1.09
SNX27-203ENST00000368843 REC8O95072 547 aa21.84■■□□□ 1.09
SNX27-203ENST00000368843 DHX57Q6P158 1386 aaKnown RBP21.83■■□□□ 1.09
SNX27-203ENST00000368843 CABP2Q9NPB3 220 aa21.83■■□□□ 1.08
SNX27-203ENST00000368843 WASHC4Q2M389 1173 aa21.82■■□□□ 1.08
SNX27-203ENST00000368843 DZIP1LQ8IYY4 767 aaKnown RBP21.82■■□□□ 1.08
SNX27-203ENST00000368843 CCDC70Q6NSX1 233 aa21.81■■□□□ 1.08
SNX27-203ENST00000368843 ANKRD20A12PQ8NF67 263 aa21.81■■□□□ 1.08
SNX27-203ENST00000368843 HOOK1Q9UJC3 728 aaKnown RBP21.81■■□□□ 1.08
SNX27-203ENST00000368843 SMARCA4P51532 1647 aa21.81■■□□□ 1.08
SNX27-203ENST00000368843 BICD2Q8TD16 824 aa21.81■■□□□ 1.08
SNX27-203ENST00000368843 PPP1R1BQ9UD71 204 aaPredicted RBP21.81■■□□□ 1.08
SNX27-203ENST00000368843 RUNDC1Q96C34 613 aa21.8■■□□□ 1.08
SNX27-203ENST00000368843 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
SNX27-203ENST00000368843 IKQ13123 557 aaPredicted RBP21.79■■□□□ 1.08
SNX27-203ENST00000368843 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
SNX27-203ENST00000368843 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
SNX27-203ENST00000368843 GGNBP2Q9H3C7 697 aa21.78■■□□□ 1.08
SNX27-203ENST00000368843 ESCO1Q5FWF5 840 aa21.78■■□□□ 1.08
SNX27-203ENST00000368843 STRN4Q9NRL3 753 aa21.77■■□□□ 1.08
SNX27-203ENST00000368843 NLRP6P59044 892 aa21.77■■□□□ 1.08
SNX27-203ENST00000368843 ERC2O15083 957 aa21.77■■□□□ 1.08
SNX27-203ENST00000368843 IPO7O95373 1038 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms