RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ZFYVE9O95405 1425 aa17.48■□□□□ 0.39
TUBE1-202ENST00000368662 NRXN1Q9ULB1 1477 aa17.47■□□□□ 0.39
TUBE1-202ENST00000368662 MYO5BQ9ULV0 1848 aa17.46■□□□□ 0.39
TUBE1-202ENST00000368662 SETD1BQ9UPS6 1966 aaKnown RBP17.46■□□□□ 0.39
TUBE1-202ENST00000368662 MYO3AQ8NEV4 1616 aa17.46■□□□□ 0.39
TUBE1-202ENST00000368662 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
TUBE1-202ENST00000368662 UBR1Q8IWV7 1749 aa17.46■□□□□ 0.38
TUBE1-202ENST00000368662 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
TUBE1-202ENST00000368662 TRPM1Q7Z4N2 1603 aa17.44■□□□□ 0.38
TUBE1-202ENST00000368662 ADGRF5Q8IZF2 1346 aa17.44■□□□□ 0.38
TUBE1-202ENST00000368662 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
TUBE1-202ENST00000368662 PIK3C2GO75747 1445 aa17.43■□□□□ 0.38
TUBE1-202ENST00000368662 RIMS2Q9UQ26 1411 aa17.43■□□□□ 0.38
TUBE1-202ENST00000368662 THEMISQ8N1K5 641 aaPredicted RBP17.43■□□□□ 0.38
TUBE1-202ENST00000368662 KIAA1210Q9ULL0 1709 aa17.42■□□□□ 0.38
TUBE1-202ENST00000368662 GPRASP1Q5JY77 1395 aa17.42■□□□□ 0.38
TUBE1-202ENST00000368662 TMEM2Q9UHN6 1383 aa17.42■□□□□ 0.38
TUBE1-202ENST00000368662 CEP170BQ9Y4F5 1589 aaPredicted RBP17.42■□□□□ 0.38
TUBE1-202ENST00000368662 EIF4G2P78344 907 aaKnown RBP eCLIP17.41■□□□□ 0.38
TUBE1-202ENST00000368662 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
TUBE1-202ENST00000368662 ZNF142P52746 1687 aaPredicted RBP17.4■□□□□ 0.38
TUBE1-202ENST00000368662 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
TUBE1-202ENST00000368662 LAMC1P11047 1609 aa17.39■□□□□ 0.37
TUBE1-202ENST00000368662 KDM4FA0A1W2PPD8 638 aa17.39■□□□□ 0.37
TUBE1-202ENST00000368662 SLIT1O75093 1534 aa17.39■□□□□ 0.37
TUBE1-202ENST00000368662 NUTM2DQ5VT03 806 aaPredicted RBP17.38■□□□□ 0.37
TUBE1-202ENST00000368662 C14orf93Q9H972 538 aaKnown RBP17.38■□□□□ 0.37
TUBE1-202ENST00000368662 ARHGAP23Q9P227 1491 aa17.37■□□□□ 0.37
TUBE1-202ENST00000368662 NBPF1Q3BBV0 1214 aa17.37■□□□□ 0.37
TUBE1-202ENST00000368662 EID1Q9Y6B2 187 aa17.37■□□□□ 0.37
TUBE1-202ENST00000368662 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
TUBE1-202ENST00000368662 SETBP1Q9Y6X0 1596 aa17.35■□□□□ 0.37
TUBE1-202ENST00000368662 USP47Q96K76 1375 aa17.35■□□□□ 0.37
TUBE1-202ENST00000368662 HSPA5P11021 654 aaKnown RBP17.34■□□□□ 0.37
TUBE1-202ENST00000368662 TXNDC2Q86VQ3 553 aa17.32■□□□□ 0.36
TUBE1-202ENST00000368662 PLEKHG1Q9ULL1 1385 aa17.32■□□□□ 0.36
TUBE1-202ENST00000368662 SCAF11Q99590 1463 aaKnown RBP17.32■□□□□ 0.36
TUBE1-202ENST00000368662 LTKP29376 864 aa17.3■□□□□ 0.36
TUBE1-202ENST00000368662 EIF3AQ14152 1382 aaKnown RBP17.3■□□□□ 0.36
TUBE1-202ENST00000368662 ADGRB1O14514 1584 aa17.3■□□□□ 0.36
TUBE1-202ENST00000368662 ALKQ9UM73 1620 aa17.29■□□□□ 0.36
TUBE1-202ENST00000368662 ANKLE2Q86XL3 938 aa17.29■□□□□ 0.36
TUBE1-202ENST00000368662 IQGAP1P46940 1657 aa17.28■□□□□ 0.36
TUBE1-202ENST00000368662 BCANQ96GW7 911 aa17.27■□□□□ 0.35
TUBE1-202ENST00000368662 HIRIP3Q9BW71 556 aaPredicted RBP17.27■□□□□ 0.35
TUBE1-202ENST00000368662 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
TUBE1-202ENST00000368662 ST20-MTHFSA0A0A6YYL1 179 aa17.26■□□□□ 0.35
TUBE1-202ENST00000368662 TMEM132EQ6IEE7 984 aa17.24■□□□□ 0.35
TUBE1-202ENST00000368662 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
TUBE1-202ENST00000368662 DIP2AQ14689 1571 aa17.23■□□□□ 0.35
TUBE1-202ENST00000368662 ADAMTS13Q76LX8 1427 aa17.23■□□□□ 0.35
TUBE1-202ENST00000368662 ASXL1Q8IXJ9 1541 aa17.23■□□□□ 0.35
TUBE1-202ENST00000368662 SETD1AO15047 1707 aaKnown RBP17.23■□□□□ 0.35
TUBE1-202ENST00000368662 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
TUBE1-202ENST00000368662 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
TUBE1-202ENST00000368662 MED14O60244 1454 aa17.22■□□□□ 0.35
TUBE1-202ENST00000368662 TBX22Q9Y458 520 aa17.21■□□□□ 0.35
TUBE1-202ENST00000368662 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
TUBE1-202ENST00000368662 LRPPRCP42704 1394 aaKnown RBP17.2■□□□□ 0.34
TUBE1-202ENST00000368662 CENPJQ9HC77 1338 aaPredicted RBP17.19■□□□□ 0.34
TUBE1-202ENST00000368662 LMTK3Q96Q04 1460 aa17.19■□□□□ 0.34
TUBE1-202ENST00000368662 METP08581 1390 aa17.19■□□□□ 0.34
TUBE1-202ENST00000368662 ABCC11Q96J66 1382 aa17.19■□□□□ 0.34
TUBE1-202ENST00000368662 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
TUBE1-202ENST00000368662 SBNO2Q9Y2G9 1366 aa17.18■□□□□ 0.34
TUBE1-202ENST00000368662 TESK2Q96S53 571 aa17.18■□□□□ 0.34
TUBE1-202ENST00000368662 DLC1Q96QB1 1528 aa17.18■□□□□ 0.34
TUBE1-202ENST00000368662 PIK3R4Q99570 1358 aa17.17■□□□□ 0.34
TUBE1-202ENST00000368662 NPHP4O75161 1426 aaPredicted RBP17.17■□□□□ 0.34
TUBE1-202ENST00000368662 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
TUBE1-202ENST00000368662 TMF1P82094 1093 aa17.17■□□□□ 0.34
TUBE1-202ENST00000368662 STK26Q9P289 416 aa17.17■□□□□ 0.34
TUBE1-202ENST00000368662 ARHGEF28Q8N1W1 1705 aaKnown RBP17.16■□□□□ 0.34
TUBE1-202ENST00000368662 TECPR2O15040 1411 aa17.16■□□□□ 0.34
TUBE1-202ENST00000368662 WASHC2AQ641Q2 1341 aa17.15■□□□□ 0.34
TUBE1-202ENST00000368662 SIRT1Q96EB6 747 aa17.15■□□□□ 0.34
TUBE1-202ENST00000368662 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
TUBE1-202ENST00000368662 KNDC1Q76NI1 1749 aa17.14■□□□□ 0.34
TUBE1-202ENST00000368662 CDCA8Q53HL2 280 aa17.14■□□□□ 0.33
TUBE1-202ENST00000368662 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
TUBE1-202ENST00000368662 NCKAP5LQ9HCH0 1330 aa17.14■□□□□ 0.33
TUBE1-202ENST00000368662 C11orf95C9JLR9 678 aaPredicted RBP17.13■□□□□ 0.33
TUBE1-202ENST00000368662 FAM135BQ49AJ0 1406 aa17.13■□□□□ 0.33
TUBE1-202ENST00000368662 POGKQ9P215 609 aa17.12■□□□□ 0.33
TUBE1-202ENST00000368662 CPS1P31327 1500 aa17.12■□□□□ 0.33
TUBE1-202ENST00000368662 QRICH2Q9H0J4 1663 aa17.11■□□□□ 0.33
TUBE1-202ENST00000368662 HSPA2P54652 639 aa17.11■□□□□ 0.33
TUBE1-202ENST00000368662 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
TUBE1-202ENST00000368662 PRAM1Q96QH2 718 aa17.11■□□□□ 0.33
TUBE1-202ENST00000368662 DISP3Q9P2K9 1392 aa17.1■□□□□ 0.33
TUBE1-202ENST00000368662 AMOTL2Q9Y2J4 779 aa17.09■□□□□ 0.33
TUBE1-202ENST00000368662 PTCH1Q13635 1447 aa17.09■□□□□ 0.33
TUBE1-202ENST00000368662 PTPRUQ92729 1446 aa17.09■□□□□ 0.33
TUBE1-202ENST00000368662 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
TUBE1-202ENST00000368662 EVC2Q86UK5 1308 aa17.07■□□□□ 0.32
TUBE1-202ENST00000368662 XRN1Q8IZH2 1706 aaKnown RBP17.07■□□□□ 0.32
TUBE1-202ENST00000368662 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
TUBE1-202ENST00000368662 PUS7Q96PZ0 661 aaKnown RBP17.06■□□□□ 0.32
TUBE1-202ENST00000368662 SAFB2Q14151 953 aaKnown RBP eCLIP17.05■□□□□ 0.32
TUBE1-202ENST00000368662 WAPLQ7Z5K2 1190 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms