RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 IPO8O15397 1037 aaKnown RBP10.78□□□□□ -0.68
PTPRK-206ENST00000368215 EIF5BO60841 1220 aaKnown RBP10.78□□□□□ -0.68
PTPRK-206ENST00000368215 TRHP20396 242 aaPredicted RBP10.78□□□□□ -0.68
PTPRK-206ENST00000368215 PANK1Q8TE04 598 aa10.78□□□□□ -0.68
PTPRK-206ENST00000368215 EIF4G3O43432 1585 aaKnown RBP10.77□□□□□ -0.69
PTPRK-206ENST00000368215 PMFBP1Q8TBY8 1022 aa10.77□□□□□ -0.69
PTPRK-206ENST00000368215 DISP3Q9P2K9 1392 aa10.77□□□□□ -0.69
PTPRK-206ENST00000368215 TCP11L2Q8N4U5 519 aa10.76□□□□□ -0.69
PTPRK-206ENST00000368215 RUNDC1Q96C34 613 aa10.76□□□□□ -0.69
PTPRK-206ENST00000368215 PZPP20742 1482 aa10.76□□□□□ -0.69
PTPRK-206ENST00000368215 PBRM1Q86U86 1689 aa10.76□□□□□ -0.69
PTPRK-206ENST00000368215 BCAR3O75815 825 aa10.76□□□□□ -0.69
PTPRK-206ENST00000368215 SKAP1Q86WV1 359 aa10.76□□□□□ -0.69
PTPRK-206ENST00000368215 ADGRF5Q8IZF2 1346 aa10.75□□□□□ -0.69
PTPRK-206ENST00000368215 FAM161AQ3B820 660 aa10.75□□□□□ -0.69
PTPRK-206ENST00000368215 TARBP1Q13395 1621 aaKnown RBP10.75□□□□□ -0.69
PTPRK-206ENST00000368215 PAK3O75914 559 aaPredicted RBP10.75□□□□□ -0.69
PTPRK-206ENST00000368215 MFAP1P55081 439 aaKnown RBP10.75□□□□□ -0.69
PTPRK-206ENST00000368215 RIPK4P57078 832 aa10.73□□□□□ -0.69
PTPRK-206ENST00000368215 SYCP2Q9BX26 1530 aa10.73□□□□□ -0.69
PTPRK-206ENST00000368215 DIAPH1O60610 1272 aaKnown RBP10.73□□□□□ -0.69
PTPRK-206ENST00000368215 ZKSCAN2Q63HK3 967 aa10.73□□□□□ -0.69
PTPRK-206ENST00000368215 CHMP4BQ9H444 224 aaKnown RBP10.73□□□□□ -0.69
PTPRK-206ENST00000368215 KDM6BO15054 1643 aa10.73□□□□□ -0.69
PTPRK-206ENST00000368215 RTF1Q92541 710 aaKnown RBP10.73□□□□□ -0.69
PTPRK-206ENST00000368215 ANP32BQ92688 251 aaKnown RBP10.72□□□□□ -0.69
PTPRK-206ENST00000368215 DNMT1P26358 1616 aaKnown RBP10.72□□□□□ -0.69
PTPRK-206ENST00000368215 MSH5O43196 834 aa10.72□□□□□ -0.69
PTPRK-206ENST00000368215 HSP90AB1P08238 724 aaKnown RBP10.72□□□□□ -0.69
PTPRK-206ENST00000368215 HMOX1P09601 288 aa10.72□□□□□ -0.69
PTPRK-206ENST00000368215 C20orf194Q5TEA3 1177 aa10.72□□□□□ -0.69
PTPRK-206ENST00000368215 PRAM1Q96QH2 718 aa10.72□□□□□ -0.69
PTPRK-206ENST00000368215 ITSN2Q9NZM3 1697 aa10.72□□□□□ -0.69
PTPRK-206ENST00000368215 RALGAPBQ86X10 1494 aa10.71□□□□□ -0.69
PTPRK-206ENST00000368215 TEX14Q8IWB6 1497 aa10.71□□□□□ -0.7
PTPRK-206ENST00000368215 NCLP19338 710 aaKnown RBP10.71□□□□□ -0.7
PTPRK-206ENST00000368215 CALD1Q05682 793 aaKnown RBP10.71□□□□□ -0.7
PTPRK-206ENST00000368215 HSCBQ8IWL3 235 aa10.7□□□□□ -0.7
PTPRK-206ENST00000368215 NGDNQ8NEJ9 315 aaKnown RBP10.7□□□□□ -0.7
PTPRK-206ENST00000368215 NUP160Q12769 1436 aa10.7□□□□□ -0.7
PTPRK-206ENST00000368215 COG3Q96JB2 828 aa10.7□□□□□ -0.7
PTPRK-206ENST00000368215 ADGRL1O94910 1474 aa10.7□□□□□ -0.7
PTPRK-206ENST00000368215 LTV1Q96GA3 475 aaPredicted RBP10.7□□□□□ -0.7
PTPRK-206ENST00000368215 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
PTPRK-206ENST00000368215 DHX29Q7Z478 1369 aaKnown RBP10.69□□□□□ -0.7
PTPRK-206ENST00000368215 FAM135AQ9P2D6 1515 aa10.69□□□□□ -0.7
PTPRK-206ENST00000368215 NGEFQ8N5V2 710 aa10.69□□□□□ -0.7
PTPRK-206ENST00000368215 TSR2Q969E8 191 aaKnown RBP10.69□□□□□ -0.7
PTPRK-206ENST00000368215 TRAPPC8Q9Y2L5 1435 aa10.69□□□□□ -0.7
PTPRK-206ENST00000368215 CASC1Q6TDU7 716 aa10.69□□□□□ -0.7
PTPRK-206ENST00000368215 DZIP1LQ8IYY4 767 aaKnown RBP10.69□□□□□ -0.7
PTPRK-206ENST00000368215 PRAG1Q86YV5 1406 aa10.69□□□□□ -0.7
PTPRK-206ENST00000368215 TESK2Q96S53 571 aa10.69□□□□□ -0.7
PTPRK-206ENST00000368215 SLC4A10Q6U841 1118 aa10.68□□□□□ -0.7
PTPRK-206ENST00000368215 EID1Q9Y6B2 187 aa10.68□□□□□ -0.7
PTPRK-206ENST00000368215 PLCH2O75038 1416 aa10.68□□□□□ -0.7
PTPRK-206ENST00000368215 CEP170Q5SW79 1584 aa10.67□□□□□ -0.7
PTPRK-206ENST00000368215 FANCAO15360 1455 aa10.67□□□□□ -0.7
PTPRK-206ENST00000368215 NSD3Q9BZ95 1437 aa10.67□□□□□ -0.7
PTPRK-206ENST00000368215 A0A0G2JS52 829 aa10.67□□□□□ -0.7
PTPRK-206ENST00000368215 AMPHP49418 695 aa10.67□□□□□ -0.7
PTPRK-206ENST00000368215 SLFN5Q08AF3 891 aa10.67□□□□□ -0.7
PTPRK-206ENST00000368215 GZF1Q9H116 711 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-206ENST00000368215 CABP1Q9NZU7 370 aa10.67□□□□□ -0.7
PTPRK-206ENST00000368215 GOLGA6L22H0YM25 854 aa10.66□□□□□ -0.7
PTPRK-206ENST00000368215 CD109Q6YHK3 1445 aa10.66□□□□□ -0.7
PTPRK-206ENST00000368215 EXOSC9Q06265 439 aaKnown RBP10.66□□□□□ -0.7
PTPRK-206ENST00000368215 BACH2Q9BYV9 841 aa10.66□□□□□ -0.7
PTPRK-206ENST00000368215 ANKRD45Q5TZF3 282 aa10.66□□□□□ -0.7
PTPRK-206ENST00000368215 TXNDC2Q86VQ3 553 aa10.65□□□□□ -0.7
PTPRK-206ENST00000368215 HAP1P54257 671 aaPredicted RBP10.65□□□□□ -0.7
PTPRK-206ENST00000368215 OS9Q13438 667 aaPredicted RBP10.65□□□□□ -0.7
PTPRK-206ENST00000368215 WWC1Q8IX03 1113 aa10.65□□□□□ -0.7
PTPRK-206ENST00000368215 CDK19Q9BWU1 502 aa10.65□□□□□ -0.7
PTPRK-206ENST00000368215 FOXD4L1Q9NU39 408 aa10.65□□□□□ -0.7
PTPRK-206ENST00000368215 LMOD3Q0VAK6 560 aa10.64□□□□□ -0.71
PTPRK-206ENST00000368215 PRKAR2BP31323 418 aa10.64□□□□□ -0.71
PTPRK-206ENST00000368215 SLC52A1Q9NWF4 448 aa10.64□□□□□ -0.71
PTPRK-206ENST00000368215 ADGRL2O95490 1459 aa10.64□□□□□ -0.71
PTPRK-206ENST00000368215 SCAF11Q99590 1463 aaKnown RBP10.64□□□□□ -0.71
PTPRK-206ENST00000368215 NOS1P29475 1434 aa10.64□□□□□ -0.71
PTPRK-206ENST00000368215 PER1O15534 1290 aaPredicted RBP10.64□□□□□ -0.71
PTPRK-206ENST00000368215 IDI1Q13907 227 aa10.64□□□□□ -0.71
PTPRK-206ENST00000368215 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
PTPRK-206ENST00000368215 DUSP27Q5VZP5 1158 aa10.64□□□□□ -0.71
PTPRK-206ENST00000368215 DDX19BQ9UMR2 479 aa10.64□□□□□ -0.71
PTPRK-206ENST00000368215 GCC2Q8IWJ2 1684 aa10.64□□□□□ -0.71
PTPRK-206ENST00000368215 FBXO31Q5XUX0 539 aaPredicted RBP10.63□□□□□ -0.71
PTPRK-206ENST00000368215 SHANK2Q9UPX8 1470 aa10.63□□□□□ -0.71
PTPRK-206ENST00000368215 LNPKQ9C0E8 428 aa10.63□□□□□ -0.71
PTPRK-206ENST00000368215 PARD3Q8TEW0 1356 aa10.62□□□□□ -0.71
PTPRK-206ENST00000368215 STK31Q9BXU1 1019 aa10.62□□□□□ -0.71
PTPRK-206ENST00000368215 SPATA31E1Q6ZUB1 1445 aa10.62□□□□□ -0.71
PTPRK-206ENST00000368215 DUOX2Q9NRD8 1548 aa10.62□□□□□ -0.71
PTPRK-206ENST00000368215 RPGRIP1LQ68CZ1 1315 aa10.62□□□□□ -0.71
PTPRK-206ENST00000368215 PDE3AQ14432 1141 aa10.61□□□□□ -0.71
PTPRK-206ENST00000368215 WAPLQ7Z5K2 1190 aa10.61□□□□□ -0.71
PTPRK-206ENST00000368215 NECTIN2Q92692 538 aa10.61□□□□□ -0.71
PTPRK-206ENST00000368215 KDM5BQ9UGL1 1544 aa10.61□□□□□ -0.71
PTPRK-206ENST00000368215 TRIM44Q96DX7 344 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms