RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 NWD1Q149M9 1564 aa15.63■□□□□ 0.09
YBX3-203ENST00000366286 CHD2O14647 1828 aaKnown RBP15.61■□□□□ 0.09
YBX3-203ENST00000366286 ALKQ9UM73 1620 aa15.61■□□□□ 0.09
YBX3-203ENST00000366286 CHGAP10645 457 aaKnown RBP15.61■□□□□ 0.09
YBX3-203ENST00000366286 PLEKHG1Q9ULL1 1385 aa15.61■□□□□ 0.09
YBX3-203ENST00000366286 UBAP1LF5GYI3 381 aa15.6■□□□□ 0.09
YBX3-203ENST00000366286 DIP2AQ14689 1571 aa15.6■□□□□ 0.09
YBX3-203ENST00000366286 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
YBX3-203ENST00000366286 NRXN3Q9Y4C0 1643 aa15.58■□□□□ 0.09
YBX3-203ENST00000366286 PPP1R15AO75807 674 aaPredicted RBP15.57■□□□□ 0.08
YBX3-203ENST00000366286 SLC26A8Q96RN1 970 aa15.57■□□□□ 0.08
YBX3-203ENST00000366286 NKTRP30414 1462 aaKnown RBP15.57■□□□□ 0.08
YBX3-203ENST00000366286 NEXMIFQ5QGS0 1516 aa15.57■□□□□ 0.08
YBX3-203ENST00000366286 SENP3Q9H4L4 574 aaPredicted RBP15.56■□□□□ 0.08
YBX3-203ENST00000366286 PPLO60437 1756 aa15.54■□□□□ 0.08
YBX3-203ENST00000366286 SETBP1Q9Y6X0 1596 aa15.54■□□□□ 0.08
YBX3-203ENST00000366286 ADAMTS13Q76LX8 1427 aa15.54■□□□□ 0.08
YBX3-203ENST00000366286 HDGFP51858 240 aaKnown RBP15.54■□□□□ 0.08
YBX3-203ENST00000366286 NUTM2DQ5VT03 806 aaPredicted RBP15.54■□□□□ 0.08
YBX3-203ENST00000366286 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.54■□□□□ 0.08
YBX3-203ENST00000366286 BCANQ96GW7 911 aa15.54■□□□□ 0.08
YBX3-203ENST00000366286 SLC4A1APQ9BWU0 796 aaKnown RBP15.54■□□□□ 0.08
YBX3-203ENST00000366286 TOM1O60784 492 aa15.52■□□□□ 0.08
YBX3-203ENST00000366286 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
YBX3-203ENST00000366286 KCNA6P17658 529 aa15.51■□□□□ 0.07
YBX3-203ENST00000366286 SETD1AO15047 1707 aaKnown RBP15.51■□□□□ 0.07
YBX3-203ENST00000366286 XRN1Q8IZH2 1706 aaKnown RBP15.51■□□□□ 0.07
YBX3-203ENST00000366286 IFT172Q9UG01 1749 aa15.51■□□□□ 0.07
YBX3-203ENST00000366286 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
YBX3-203ENST00000366286 PIP4K2BP78356 416 aa15.5■□□□□ 0.07
YBX3-203ENST00000366286 TMEM94Q12767 1356 aa15.49■□□□□ 0.07
YBX3-203ENST00000366286 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
YBX3-203ENST00000366286 FOXD1Q16676 465 aa15.48■□□□□ 0.07
YBX3-203ENST00000366286 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
YBX3-203ENST00000366286 TBX22Q9Y458 520 aa15.47■□□□□ 0.07
YBX3-203ENST00000366286 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
YBX3-203ENST00000366286 PIK3R4Q99570 1358 aa15.46■□□□□ 0.07
YBX3-203ENST00000366286 ROBO1Q9Y6N7 1651 aa15.45■□□□□ 0.06
YBX3-203ENST00000366286 CCDC144AA2RUR9 1427 aa15.45■□□□□ 0.06
YBX3-203ENST00000366286 PTPRUQ92729 1446 aa15.45■□□□□ 0.06
YBX3-203ENST00000366286 PROSER2Q86WR7 435 aaPredicted RBP15.45■□□□□ 0.06
YBX3-203ENST00000366286 RBM33Q96EV2 1170 aaKnown RBP15.45■□□□□ 0.06
YBX3-203ENST00000366286 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.45■□□□□ 0.06
YBX3-203ENST00000366286 HSPA1LP34931 641 aa15.43■□□□□ 0.06
YBX3-203ENST00000366286 SPATA31E1Q6ZUB1 1445 aa15.42■□□□□ 0.06
YBX3-203ENST00000366286 ACIN1Q9UKV3 1341 aaKnown RBP15.42■□□□□ 0.06
YBX3-203ENST00000366286 MSH6P52701 1360 aa15.41■□□□□ 0.06
YBX3-203ENST00000366286 NALCNQ8IZF0 1738 aa15.41■□□□□ 0.06
YBX3-203ENST00000366286 METP08581 1390 aa15.4■□□□□ 0.06
YBX3-203ENST00000366286 NCOA3Q9Y6Q9 1424 aa15.4■□□□□ 0.06
YBX3-203ENST00000366286 MED1Q15648 1581 aaPredicted RBP15.39■□□□□ 0.05
YBX3-203ENST00000366286 RPGRIP1LQ68CZ1 1315 aa15.39■□□□□ 0.05
YBX3-203ENST00000366286 PHLPP1O60346 1717 aa15.37■□□□□ 0.05
YBX3-203ENST00000366286 FAM135BQ49AJ0 1406 aa15.37■□□□□ 0.05
YBX3-203ENST00000366286 AMOTL2Q9Y2J4 779 aa15.37■□□□□ 0.05
YBX3-203ENST00000366286 DISP3Q9P2K9 1392 aa15.36■□□□□ 0.05
YBX3-203ENST00000366286 VGFO15240 615 aaPredicted RBP15.36■□□□□ 0.05
YBX3-203ENST00000366286 KNDC1Q76NI1 1749 aa15.35■□□□□ 0.05
YBX3-203ENST00000366286 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
YBX3-203ENST00000366286 LAMC1P11047 1609 aa15.34■□□□□ 0.05
YBX3-203ENST00000366286 PTCH1Q13635 1447 aa15.34■□□□□ 0.05
YBX3-203ENST00000366286 ASXL1Q8IXJ9 1541 aa15.33■□□□□ 0.05
YBX3-203ENST00000366286 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
YBX3-203ENST00000366286 ANKRD30BQ9BXX2 1392 aa15.33■□□□□ 0.04
YBX3-203ENST00000366286 DCCP43146 1447 aa15.33■□□□□ 0.04
YBX3-203ENST00000366286 PRAG1Q86YV5 1406 aa15.33■□□□□ 0.04
YBX3-203ENST00000366286 ADGRF5Q8IZF2 1346 aa15.32■□□□□ 0.04
YBX3-203ENST00000366286 PIK3C2GO75747 1445 aa15.32■□□□□ 0.04
YBX3-203ENST00000366286 MYOM2P54296 1465 aa15.32■□□□□ 0.04
YBX3-203ENST00000366286 ADGRL3Q9HAR2 1447 aa15.31■□□□□ 0.04
YBX3-203ENST00000366286 COL16A1Q07092 1604 aaPredicted RBP15.31■□□□□ 0.04
YBX3-203ENST00000366286 SLAIN2Q9P270 581 aa15.3■□□□□ 0.04
YBX3-203ENST00000366286 AHDC1Q5TGY3 1603 aaPredicted RBP15.29■□□□□ 0.04
YBX3-203ENST00000366286 NRXN1Q9ULB1 1477 aa15.29■□□□□ 0.04
YBX3-203ENST00000366286 HRCP23327 699 aa15.29■□□□□ 0.04
YBX3-203ENST00000366286 C19orf44Q9H6X5 657 aa15.29■□□□□ 0.04
YBX3-203ENST00000366286 NHSL1Q5SYE7 1610 aa15.28■□□□□ 0.04
YBX3-203ENST00000366286 ROBO2Q9HCK4 1378 aa15.28■□□□□ 0.04
YBX3-203ENST00000366286 CADPS2Q86UW7 1296 aa15.28■□□□□ 0.04
YBX3-203ENST00000366286 MST1RQ04912 1400 aa15.27■□□□□ 0.04
YBX3-203ENST00000366286 ATF3P18847 181 aa15.27■□□□□ 0.04
YBX3-203ENST00000366286 CDC42BPGQ6DT37 1551 aa15.25■□□□□ 0.03
YBX3-203ENST00000366286 SHPRHQ149N8 1683 aa15.25■□□□□ 0.03
YBX3-203ENST00000366286 TECPR2O15040 1411 aa15.25■□□□□ 0.03
YBX3-203ENST00000366286 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
YBX3-203ENST00000366286 ILDR2Q71H61 639 aa15.22■□□□□ 0.03
YBX3-203ENST00000366286 YTHDC2Q9H6S0 1430 aaKnown RBP15.21■□□□□ 0.03
YBX3-203ENST00000366286 BRINP3Q76B58 766 aa15.21■□□□□ 0.03
YBX3-203ENST00000366286 FMN2Q9NZ56 1722 aa15.2■□□□□ 0.02
YBX3-203ENST00000366286 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
YBX3-203ENST00000366286 ADGRB1O14514 1584 aa15.19■□□□□ 0.02
YBX3-203ENST00000366286 TMEM132EQ6IEE7 984 aa15.19■□□□□ 0.02
YBX3-203ENST00000366286 STK26Q9P289 416 aa15.19■□□□□ 0.02
YBX3-203ENST00000366286 C14orf93Q9H972 538 aaKnown RBP15.18■□□□□ 0.02
YBX3-203ENST00000366286 ABCC11Q96J66 1382 aa15.18■□□□□ 0.02
YBX3-203ENST00000366286 JCADQ9P266 1359 aa15.18■□□□□ 0.02
YBX3-203ENST00000366286 RGPD8O14715 1765 aaPredicted RBP15.17■□□□□ 0.02
YBX3-203ENST00000366286 PLEKHH1Q9ULM0 1364 aa15.17■□□□□ 0.02
YBX3-203ENST00000366286 CFAP70Q5T0N1 1121 aa15.17■□□□□ 0.02
YBX3-203ENST00000366286 ARHGEF28Q8N1W1 1705 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms