RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 PPP1R18Q6NYC8 613 aa6.77□□□□□ -1.33
RNU4-42P-201ENST00000364738 NKX2-3Q8TAU0 364 aa6.76□□□□□ -1.33
RNU4-42P-201ENST00000364738 PCDHB3Q9Y5E6 796 aa6.76□□□□□ -1.33
RNU4-42P-201ENST00000364738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.75□□□□□ -1.33
RNU4-42P-201ENST00000364738 OATP04181 439 aa6.75□□□□□ -1.33
RNU4-42P-201ENST00000364738 CFHP08603 1231 aa6.75□□□□□ -1.33
RNU4-42P-201ENST00000364738 KMT5BQ4FZB7 885 aa6.75□□□□□ -1.33
RNU4-42P-201ENST00000364738 ZPR1O75312 459 aa6.74□□□□□ -1.33
RNU4-42P-201ENST00000364738 BLOC1S3Q6QNY0 202 aa6.74□□□□□ -1.33
RNU4-42P-201ENST00000364738 PXYLP1Q8TE99 480 aa6.74□□□□□ -1.33
RNU4-42P-201ENST00000364738 PRKD2Q9BZL6 878 aa6.74□□□□□ -1.33
RNU4-42P-201ENST00000364738 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.74□□□□□ -1.33
RNU4-42P-201ENST00000364738 GNPATO15228 680 aa6.73□□□□□ -1.33
RNU4-42P-201ENST00000364738 GPR37O15354 613 aa6.73□□□□□ -1.33
RNU4-42P-201ENST00000364738 GGCXP38435 758 aa6.73□□□□□ -1.33
RNU4-42P-201ENST00000364738 METTL3Q86U44 580 aaKnown RBP6.73□□□□□ -1.33
RNU4-42P-201ENST00000364738 KDM2AQ9Y2K7 1162 aa6.73□□□□□ -1.33
RNU4-42P-201ENST00000364738 ACTN4O43707 911 aaKnown RBP6.71□□□□□ -1.34
RNU4-42P-201ENST00000364738 TLL1O43897 1013 aa6.71□□□□□ -1.34
RNU4-42P-201ENST00000364738 SLC10A3P09131 477 aa6.71□□□□□ -1.34
RNU4-42P-201ENST00000364738 FECHP22830 423 aa6.71□□□□□ -1.34
RNU4-42P-201ENST00000364738 Q6ZNB5 142 aa6.71□□□□□ -1.34
RNU4-42P-201ENST00000364738 GPIHBP1Q8IV16 184 aa6.7□□□□□ -1.34
RNU4-42P-201ENST00000364738 V9GY48 417 aaPredicted RBP6.7□□□□□ -1.34
RNU4-42P-201ENST00000364738 LAPTM4AQ15012 233 aa6.69□□□□□ -1.34
RNU4-42P-201ENST00000364738 RSPH4AQ5TD94 716 aa6.69□□□□□ -1.34
RNU4-42P-201ENST00000364738 TMUB1Q9BVT8 246 aa6.69□□□□□ -1.34
RNU4-42P-201ENST00000364738 GFRA3O60609 400 aa6.68□□□□□ -1.34
RNU4-42P-201ENST00000364738 NR1I2O75469 434 aa6.67□□□□□ -1.34
RNU4-42P-201ENST00000364738 RDH13Q8NBN7 331 aa6.67□□□□□ -1.34
RNU4-42P-201ENST00000364738 NLRP7Q8WX94 980 aa6.67□□□□□ -1.34
RNU4-42P-201ENST00000364738 RNF223E7ERA6 249 aa6.66□□□□□ -1.34
RNU4-42P-201ENST00000364738 VSIG10Q8N0Z9 540 aa6.66□□□□□ -1.34
RNU4-42P-201ENST00000364738 DAXXQ9UER7 740 aaPredicted RBP6.66□□□□□ -1.34
RNU4-42P-201ENST00000364738 DDX11L8A8MPP1 907 aa6.65□□□□□ -1.34
RNU4-42P-201ENST00000364738 TULP1O00294 542 aaPredicted RBP6.65□□□□□ -1.34
RNU4-42P-201ENST00000364738 S1PR4O95977 384 aa6.65□□□□□ -1.34
RNU4-42P-201ENST00000364738 ADH1BP00325 375 aa6.65□□□□□ -1.34
RNU4-42P-201ENST00000364738 PUS10Q3MIT2 529 aaKnown RBP6.65□□□□□ -1.34
RNU4-42P-201ENST00000364738 NRG2O14511 850 aaPredicted RBP6.64□□□□□ -1.35
RNU4-42P-201ENST00000364738 SULF1Q8IWU6 871 aa6.63□□□□□ -1.35
RNU4-42P-201ENST00000364738 SCUBE3Q8IX30 993 aa6.63□□□□□ -1.35
RNU4-42P-201ENST00000364738 PHOX2BQ99453 314 aa6.63□□□□□ -1.35
RNU4-42P-201ENST00000364738 PDZRN3Q9UPQ7 1066 aa6.63□□□□□ -1.35
RNU4-42P-201ENST00000364738 PPEF1O14829 653 aaPredicted RBP6.62□□□□□ -1.35
RNU4-42P-201ENST00000364738 SLC19A1P41440 591 aa6.62□□□□□ -1.35
RNU4-42P-201ENST00000364738 ANKLE1Q8NAG6 615 aa6.62□□□□□ -1.35
RNU4-42P-201ENST00000364738 SLC6A16Q9GZN6 736 aa6.62□□□□□ -1.35
RNU4-42P-201ENST00000364738 FUT2Q10981 343 aa6.61□□□□□ -1.35
RNU4-42P-201ENST00000364738 SPSB2Q99619 263 aa6.61□□□□□ -1.35
RNU4-42P-201ENST00000364738 MAP2K5Q13163 448 aa6.6□□□□□ -1.35
RNU4-42P-201ENST00000364738 MORN1Q5T089 497 aa6.6□□□□□ -1.35
RNU4-42P-201ENST00000364738 TRAF7Q6Q0C0 670 aa6.6□□□□□ -1.35
RNU4-42P-201ENST00000364738 ATP6V1AP38606 617 aa6.59□□□□□ -1.35
RNU4-42P-201ENST00000364738 GCGRP47871 477 aa6.59□□□□□ -1.35
RNU4-42P-201ENST00000364738 EMID1Q96A84 441 aaPredicted RBP6.59□□□□□ -1.35
RNU4-42P-201ENST00000364738 LCE2BO14633 110 aa6.58□□□□□ -1.36
RNU4-42P-201ENST00000364738 SPRYD7Q5W111 196 aa6.58□□□□□ -1.36
RNU4-42P-201ENST00000364738 ZNF697Q5TEC3 545 aa6.57□□□□□ -1.36
RNU4-42P-201ENST00000364738 LIAT1Q6ZQX7 453 aa6.57□□□□□ -1.36
RNU4-42P-201ENST00000364738 TRIM67Q6ZTA4 783 aa6.57□□□□□ -1.36
RNU4-42P-201ENST00000364738 SLC27A5Q9Y2P5 690 aa6.57□□□□□ -1.36
RNU4-42P-201ENST00000364738 IRF6O14896 467 aa6.56□□□□□ -1.36
RNU4-42P-201ENST00000364738 FMNL1O95466 1100 aaPredicted RBP6.56□□□□□ -1.36
RNU4-42P-201ENST00000364738 PLA2G2CQ5R387 149 aa6.56□□□□□ -1.36
RNU4-42P-201ENST00000364738 ZNF598Q86UK7 904 aaKnown RBP6.56□□□□□ -1.36
RNU4-42P-201ENST00000364738 THAP11Q96EK4 314 aa6.56□□□□□ -1.36
RNU4-42P-201ENST00000364738 MDM2Q00987 491 aaPredicted RBP6.55□□□□□ -1.36
RNU4-42P-201ENST00000364738 GRIPAP1Q4V328 841 aa6.55□□□□□ -1.36
RNU4-42P-201ENST00000364738 CCDC102AQ96A19 550 aa6.55□□□□□ -1.36
RNU4-42P-201ENST00000364738 MINK1Q8N4C8 1332 aaPredicted RBP6.54□□□□□ -1.36
RNU4-42P-201ENST00000364738 CD46P15529 392 aa6.54□□□□□ -1.36
RNU4-42P-201ENST00000364738 FCF1Q9Y324 198 aaKnown RBP6.54□□□□□ -1.36
RNU4-42P-201ENST00000364738 TNFRSF10AO00220 468 aa6.53□□□□□ -1.36
RNU4-42P-201ENST00000364738 PRR20EP86478 221 aa6.53□□□□□ -1.36
RNU4-42P-201ENST00000364738 PRR20CP86479 221 aa6.53□□□□□ -1.36
RNU4-42P-201ENST00000364738 PRR20DP86480 221 aa6.53□□□□□ -1.36
RNU4-42P-201ENST00000364738 PRR20BP86481 221 aa6.53□□□□□ -1.36
RNU4-42P-201ENST00000364738 PRR20AP86496 221 aa6.53□□□□□ -1.36
RNU4-42P-201ENST00000364738 RNF19BQ6ZMZ0 732 aa6.53□□□□□ -1.36
RNU4-42P-201ENST00000364738 PRDM9Q9NQV7 894 aa6.53□□□□□ -1.36
RNU4-42P-201ENST00000364738 SALL2Q9Y467 1007 aaPredicted RBP6.53□□□□□ -1.36
RNU4-42P-201ENST00000364738 KDM4AO75164 1064 aa6.52□□□□□ -1.37
RNU4-42P-201ENST00000364738 PKDCCQ504Y2 493 aa6.52□□□□□ -1.37
RNU4-42P-201ENST00000364738 BRICD5Q6PL45 260 aa6.52□□□□□ -1.37
RNU4-42P-201ENST00000364738 FAM160A2Q8N612 972 aaPredicted RBP6.52□□□□□ -1.37
RNU4-42P-201ENST00000364738 Q3C1V9 767 aa6.51□□□□□ -1.37
RNU4-42P-201ENST00000364738 GDF9O60383 454 aa6.5□□□□□ -1.37
RNU4-42P-201ENST00000364738 CLCN1P35523 988 aa6.5□□□□□ -1.37
RNU4-42P-201ENST00000364738 RPIAP49247 311 aa6.5□□□□□ -1.37
RNU4-42P-201ENST00000364738 USP46P62068 366 aa6.5□□□□□ -1.37
RNU4-42P-201ENST00000364738 MSS51Q4VC12 460 aa6.5□□□□□ -1.37
RNU4-42P-201ENST00000364738 LMOD2Q6P5Q4 547 aa6.5□□□□□ -1.37
RNU4-42P-201ENST00000364738 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNU4-42P-201ENST00000364738 GPCPD1Q9NPB8 672 aa6.5□□□□□ -1.37
RNU4-42P-201ENST00000364738 FAM187AA6NFU0 413 aa6.49□□□□□ -1.37
RNU4-42P-201ENST00000364738 DGAT1O75907 488 aa6.49□□□□□ -1.37
RNU4-42P-201ENST00000364738 FOXC1Q12948 553 aa6.49□□□□□ -1.37
RNU4-42P-201ENST00000364738 KRI1Q8N9T8 703 aaKnown RBP6.49□□□□□ -1.37
RNU4-42P-201ENST00000364738 HLA-CQ95604 372 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms