RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 UGGT2Q9NYU1 1516 aa17.18■□□□□ 0.34
SGMS1-202ENST00000361781 CFAP43Q8NDM7 1665 aa17.18■□□□□ 0.34
SGMS1-202ENST00000361781 FOXD4L6Q3SYB3 417 aaPredicted RBP17.17■□□□□ 0.34
SGMS1-202ENST00000361781 FOXD4L3Q6VB84 417 aaPredicted RBP17.17■□□□□ 0.34
SGMS1-202ENST00000361781 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
SGMS1-202ENST00000361781 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.17■□□□□ 0.34
SGMS1-202ENST00000361781 MSNP26038 577 aaKnown RBP17.17■□□□□ 0.34
SGMS1-202ENST00000361781 EIF3AQ14152 1382 aaKnown RBP17.16■□□□□ 0.34
SGMS1-202ENST00000361781 IPO8O15397 1037 aaKnown RBP17.16■□□□□ 0.34
SGMS1-202ENST00000361781 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
SGMS1-202ENST00000361781 CAMSAP2Q08AD1 1489 aa17.15■□□□□ 0.34
SGMS1-202ENST00000361781 HSP90AA2PQ14568 343 aaPredicted RBP17.15■□□□□ 0.34
SGMS1-202ENST00000361781 SEC24BO95487 1268 aa17.14■□□□□ 0.34
SGMS1-202ENST00000361781 C8orf34Q49A92 452 aa17.14■□□□□ 0.34
SGMS1-202ENST00000361781 RUNDC1Q96C34 613 aa17.14■□□□□ 0.34
SGMS1-202ENST00000361781 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.34
SGMS1-202ENST00000361781 WASHC2CQ9Y4E1 1318 aa17.14■□□□□ 0.33
SGMS1-202ENST00000361781 CHMP5Q9NZZ3 219 aa17.14■□□□□ 0.33
SGMS1-202ENST00000361781 TRAK2O60296 914 aa17.14■□□□□ 0.33
SGMS1-202ENST00000361781 GGNBP2Q9H3C7 697 aa17.14■□□□□ 0.33
SGMS1-202ENST00000361781 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
SGMS1-202ENST00000361781 TNNQ9UQP3 1299 aa17.13■□□□□ 0.33
SGMS1-202ENST00000361781 KDM6BO15054 1643 aa17.13■□□□□ 0.33
SGMS1-202ENST00000361781 ARHGEF11O15085 1522 aa17.12■□□□□ 0.33
SGMS1-202ENST00000361781 DDX49Q9Y6V7 483 aaKnown RBP17.12■□□□□ 0.33
SGMS1-202ENST00000361781 PER1O15534 1290 aaPredicted RBP17.12■□□□□ 0.33
SGMS1-202ENST00000361781 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
SGMS1-202ENST00000361781 EXOSC9Q06265 439 aaKnown RBP17.11■□□□□ 0.33
SGMS1-202ENST00000361781 C1orf115Q9H7X2 142 aa17.11■□□□□ 0.33
SGMS1-202ENST00000361781 PDE3AQ14432 1141 aa17.11■□□□□ 0.33
SGMS1-202ENST00000361781 RIPK4P57078 832 aa17.1■□□□□ 0.33
SGMS1-202ENST00000361781 IQGAP2Q13576 1575 aa17.1■□□□□ 0.33
SGMS1-202ENST00000361781 PLEKHH1Q9ULM0 1364 aa17.09■□□□□ 0.33
SGMS1-202ENST00000361781 CASC1Q6TDU7 716 aa17.09■□□□□ 0.33
SGMS1-202ENST00000361781 CABP2Q9NPB3 220 aa17.09■□□□□ 0.33
SGMS1-202ENST00000361781 TEX14Q8IWB6 1497 aa17.09■□□□□ 0.33
SGMS1-202ENST00000361781 CUL7Q14999 1698 aa17.09■□□□□ 0.33
SGMS1-202ENST00000361781 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-202ENST00000361781 SPATA31E1Q6ZUB1 1445 aa17.09■□□□□ 0.33
SGMS1-202ENST00000361781 ESF1Q9H501 851 aaKnown RBP17.08■□□□□ 0.32
SGMS1-202ENST00000361781 MAGI3Q5TCQ9 1506 aa17.08■□□□□ 0.32
SGMS1-202ENST00000361781 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
SGMS1-202ENST00000361781 TBC1D2Q9BYX2 928 aa17.07■□□□□ 0.32
SGMS1-202ENST00000361781 DDX11L8A8MPP1 907 aa17.07■□□□□ 0.32
SGMS1-202ENST00000361781 CALD1Q05682 793 aaKnown RBP17.07■□□□□ 0.32
SGMS1-202ENST00000361781 NUTM2FA1L443 756 aa17.07■□□□□ 0.32
SGMS1-202ENST00000361781 TESK2Q96S53 571 aa17.07■□□□□ 0.32
SGMS1-202ENST00000361781 HMOX1P09601 288 aa17.06■□□□□ 0.32
SGMS1-202ENST00000361781 MLECQ14165 292 aa17.06■□□□□ 0.32
SGMS1-202ENST00000361781 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
SGMS1-202ENST00000361781 MCM4P33991 863 aa17.06■□□□□ 0.32
SGMS1-202ENST00000361781 SLC4A10Q6U841 1118 aa17.06■□□□□ 0.32
SGMS1-202ENST00000361781 LRPPRCP42704 1394 aaKnown RBP17.05■□□□□ 0.32
SGMS1-202ENST00000361781 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
SGMS1-202ENST00000361781 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
SGMS1-202ENST00000361781 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
SGMS1-202ENST00000361781 PANK2Q9BZ23 570 aa17.04■□□□□ 0.32
SGMS1-202ENST00000361781 PCDHB15Q9Y5E8 787 aa17.04■□□□□ 0.32
SGMS1-202ENST00000361781 PZPP20742 1482 aa17.03■□□□□ 0.32
SGMS1-202ENST00000361781 RARSP54136 660 aaKnown RBP17.03■□□□□ 0.32
SGMS1-202ENST00000361781 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
SGMS1-202ENST00000361781 GPATCH8Q9UKJ3 1502 aaKnown RBP17.02■□□□□ 0.32
SGMS1-202ENST00000361781 NOB1Q9ULX3 412 aaKnown RBP17.02■□□□□ 0.32
SGMS1-202ENST00000361781 AMER1Q5JTC6 1135 aaPredicted RBP17.02■□□□□ 0.31
SGMS1-202ENST00000361781 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.31
SGMS1-202ENST00000361781 TCOF1Q13428 1488 aaKnown RBP17■□□□□ 0.31
SGMS1-202ENST00000361781 ARHGAP5Q13017 1502 aa17■□□□□ 0.31
SGMS1-202ENST00000361781 RLBP1P12271 317 aa16.99■□□□□ 0.31
SGMS1-202ENST00000361781 MCTP1Q6DN14 999 aa16.99■□□□□ 0.31
SGMS1-202ENST00000361781 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
SGMS1-202ENST00000361781 MRE11P49959 708 aa16.99■□□□□ 0.31
SGMS1-202ENST00000361781 MVPQ14764 893 aaKnown RBP16.99■□□□□ 0.31
SGMS1-202ENST00000361781 TAOK2Q9UL54 1235 aa16.99■□□□□ 0.31
SGMS1-202ENST00000361781 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
SGMS1-202ENST00000361781 KIAA0586Q9BVV6 1533 aa16.99■□□□□ 0.31
SGMS1-202ENST00000361781 MPNDQ8N594 471 aa16.98■□□□□ 0.31
SGMS1-202ENST00000361781 TERF2IPQ9NYB0 399 aa16.98■□□□□ 0.31
SGMS1-202ENST00000361781 NUP153P49790 1475 aaKnown RBP16.98■□□□□ 0.31
SGMS1-202ENST00000361781 FAM13BQ9NYF5 915 aa16.98■□□□□ 0.31
SGMS1-202ENST00000361781 TRIM6-TRIM34B2RNG4 842 aa16.97■□□□□ 0.31
SGMS1-202ENST00000361781 NKTRP30414 1462 aaKnown RBP16.97■□□□□ 0.31
SGMS1-202ENST00000361781 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
SGMS1-202ENST00000361781 DIAPH1O60610 1272 aaKnown RBP16.96■□□□□ 0.31
SGMS1-202ENST00000361781 EVC2Q86UK5 1308 aa16.96■□□□□ 0.31
SGMS1-202ENST00000361781 CTTNBP2Q8WZ74 1663 aa16.96■□□□□ 0.31
SGMS1-202ENST00000361781 RNF214Q8ND24 703 aa16.96■□□□□ 0.31
SGMS1-202ENST00000361781 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.31
SGMS1-202ENST00000361781 GRPEL1Q9HAV7 217 aa16.96■□□□□ 0.31
SGMS1-202ENST00000361781 NGEFQ8N5V2 710 aa16.95■□□□□ 0.3
SGMS1-202ENST00000361781 DENND4BO75064 1496 aaPredicted RBP16.95■□□□□ 0.3
SGMS1-202ENST00000361781 KDM2BQ8NHM5 1336 aa16.95■□□□□ 0.3
SGMS1-202ENST00000361781 SSH1Q8WYL5 1049 aa16.95■□□□□ 0.3
SGMS1-202ENST00000361781 PLEKHH2Q8IVE3 1493 aa16.94■□□□□ 0.3
SGMS1-202ENST00000361781 CAVIN1Q6NZI2 390 aaKnown RBP16.94■□□□□ 0.3
SGMS1-202ENST00000361781 ADGRF5Q8IZF2 1346 aa16.94■□□□□ 0.3
SGMS1-202ENST00000361781 RBM10P98175 930 aaKnown RBP16.94■□□□□ 0.3
SGMS1-202ENST00000361781 ATF7IPQ6VMQ6 1270 aa16.94■□□□□ 0.3
SGMS1-202ENST00000361781 XRCC6P12956 609 aaKnown RBP eCLIP16.93■□□□□ 0.38e-7■■■■■ 41.4
SGMS1-202ENST00000361781 NASPP49321 788 aaPredicted RBP16.93■□□□□ 0.3
SGMS1-202ENST00000361781 NECTIN2Q92692 538 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms