RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 MAPK8IP2Q13387 824 aaPredicted RBP10.84□□□□□ -0.67
CD46-206ENST00000360212 TDRD9Q8NDG6 1382 aaKnown RBP10.84□□□□□ -0.67
CD46-206ENST00000360212 BLMP54132 1417 aaPredicted RBP10.84□□□□□ -0.67
CD46-206ENST00000360212 DDX49Q9Y6V7 483 aaKnown RBP10.83□□□□□ -0.68
CD46-206ENST00000360212 ABCC5O15440 1437 aa10.83□□□□□ -0.68
CD46-206ENST00000360212 DAPK1P53355 1430 aa10.83□□□□□ -0.68
CD46-206ENST00000360212 POLR1AO95602 1720 aaPredicted RBP10.83□□□□□ -0.68
CD46-206ENST00000360212 TPRNQ4KMQ1 711 aa10.83□□□□□ -0.68
CD46-206ENST00000360212 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.83□□□□□ -0.68
CD46-206ENST00000360212 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.68
CD46-206ENST00000360212 CGNL1Q0VF96 1302 aa10.82□□□□□ -0.68
CD46-206ENST00000360212 SSFA2P28290 1259 aa10.82□□□□□ -0.68
CD46-206ENST00000360212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.82□□□□□ -0.684e-9■■□□□ 11.7
CD46-206ENST00000360212 CFDP1Q9UEE9 299 aaPredicted RBP10.82□□□□□ -0.68
CD46-206ENST00000360212 PZPP20742 1482 aa10.82□□□□□ -0.68
CD46-206ENST00000360212 ZMYM4Q5VZL5 1548 aa10.82□□□□□ -0.68
CD46-206ENST00000360212 EIF3AQ14152 1382 aaKnown RBP10.82□□□□□ -0.68
CD46-206ENST00000360212 KIAA1107Q9UPP5 1409 aa10.82□□□□□ -0.68
CD46-206ENST00000360212 RBM42Q9BTD8 480 aaKnown RBP10.82□□□□□ -0.68
CD46-206ENST00000360212 GCC2Q8IWJ2 1684 aa10.82□□□□□ -0.68
CD46-206ENST00000360212 THOC2Q8NI27 1593 aaKnown RBP10.81□□□□□ -0.68
CD46-206ENST00000360212 CBX1P83916 185 aa10.81□□□□□ -0.68
CD46-206ENST00000360212 LRRIQ1Q96JM4 1722 aa10.81□□□□□ -0.68
CD46-206ENST00000360212 CCDC173Q0VFZ6 552 aa10.81□□□□□ -0.68
CD46-206ENST00000360212 CHAMP1Q96JM3 812 aa10.81□□□□□ -0.68
CD46-206ENST00000360212 EHBP1L1Q8N3D4 1523 aa10.81□□□□□ -0.68
CD46-206ENST00000360212 GRIN2BQ13224 1484 aa10.81□□□□□ -0.68
CD46-206ENST00000360212 CAVIN1Q6NZI2 390 aaKnown RBP10.81□□□□□ -0.68
CD46-206ENST00000360212 GBP4Q96PP9 640 aa10.81□□□□□ -0.68
CD46-206ENST00000360212 CD2BP2O95400 341 aaKnown RBP10.8□□□□□ -0.68
CD46-206ENST00000360212 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
CD46-206ENST00000360212 ZNF692Q9BU19 519 aaPredicted RBP10.8□□□□□ -0.68
CD46-206ENST00000360212 ZNF521Q96K83 1311 aa10.8□□□□□ -0.68
CD46-206ENST00000360212 RSPH4AQ5TD94 716 aa10.8□□□□□ -0.68
CD46-206ENST00000360212 FOXD4L5Q5VV16 416 aaPredicted RBP10.8□□□□□ -0.68
CD46-206ENST00000360212 RNF214Q8ND24 703 aa10.8□□□□□ -0.68
CD46-206ENST00000360212 FOXD4L4Q8WXT5 416 aaPredicted RBP10.8□□□□□ -0.68
CD46-206ENST00000360212 MBD5Q9P267 1494 aa10.8□□□□□ -0.68
CD46-206ENST00000360212 CAMSAP2Q08AD1 1489 aa10.79□□□□□ -0.68
CD46-206ENST00000360212 E9PSI1 815 aa10.78□□□□□ -0.68
CD46-206ENST00000360212 TMF1P82094 1093 aa10.78□□□□□ -0.68
CD46-206ENST00000360212 MCTP1Q6DN14 999 aa10.78□□□□□ -0.68
CD46-206ENST00000360212 PMFBP1Q8TBY8 1022 aa10.78□□□□□ -0.68
CD46-206ENST00000360212 ZNF830Q96NB3 372 aaPredicted RBP10.78□□□□□ -0.68
CD46-206ENST00000360212 MAP7D2Q96T17 732 aa10.78□□□□□ -0.68
CD46-206ENST00000360212 TCOF1Q13428 1488 aaKnown RBP10.78□□□□□ -0.68
CD46-206ENST00000360212 RALGAPBQ86X10 1494 aa10.78□□□□□ -0.68
CD46-206ENST00000360212 RWDD1Q9H446 243 aaPredicted RBP10.78□□□□□ -0.68
CD46-206ENST00000360212 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
CD46-206ENST00000360212 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.68
CD46-206ENST00000360212 TESK2Q96S53 571 aa10.77□□□□□ -0.68
CD46-206ENST00000360212 TMEM51Q9NW97 253 aa10.77□□□□□ -0.68
CD46-206ENST00000360212 NKTRP30414 1462 aaKnown RBP10.77□□□□□ -0.69
CD46-206ENST00000360212 SPDYE4A6NLX3 237 aa10.77□□□□□ -0.69
CD46-206ENST00000360212 PDE3AQ14432 1141 aa10.77□□□□□ -0.69
CD46-206ENST00000360212 RBSNQ9H1K0 784 aa10.76□□□□□ -0.69
CD46-206ENST00000360212 FTSJ3Q8IY81 847 aaKnown RBP10.76□□□□□ -0.69
CD46-206ENST00000360212 LNPKQ9C0E8 428 aa10.76□□□□□ -0.69
CD46-206ENST00000360212 KIF14Q15058 1648 aa10.75□□□□□ -0.69
CD46-206ENST00000360212 ZBTB22O15209 634 aa10.75□□□□□ -0.69
CD46-206ENST00000360212 DHX37Q8IY37 1157 aaKnown RBP10.75□□□□□ -0.69
CD46-206ENST00000360212 PTMAP06454 111 aaKnown RBP10.75□□□□□ -0.69
CD46-206ENST00000360212 C17orf53Q8N3J3 647 aaPredicted RBP10.75□□□□□ -0.69
CD46-206ENST00000360212 PPP1R9BQ96SB3 815 aa10.75□□□□□ -0.69
CD46-206ENST00000360212 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.75□□□□□ -0.69
CD46-206ENST00000360212 KIAA0586Q9BVV6 1533 aa10.75□□□□□ -0.69
CD46-206ENST00000360212 PRIM1P49642 420 aaKnown RBP10.74□□□□□ -0.69
CD46-206ENST00000360212 RARSP54136 660 aaKnown RBP10.74□□□□□ -0.69
CD46-206ENST00000360212 FOXD4L6Q3SYB3 417 aaPredicted RBP10.74□□□□□ -0.69
CD46-206ENST00000360212 FOXD4L3Q6VB84 417 aaPredicted RBP10.74□□□□□ -0.69
CD46-206ENST00000360212 GOLGA6L22H0YM25 854 aa10.74□□□□□ -0.69
CD46-206ENST00000360212 DMTNQ08495 405 aa10.74□□□□□ -0.69
CD46-206ENST00000360212 WWC1Q8IX03 1113 aa10.74□□□□□ -0.69
CD46-206ENST00000360212 TRMT2AQ8IZ69 625 aaKnown RBP10.74□□□□□ -0.69
CD46-206ENST00000360212 GAS2L2Q8NHY3 880 aa10.74□□□□□ -0.69
CD46-206ENST00000360212 ZFP91Q96JP5 570 aaPredicted RBP10.74□□□□□ -0.69
CD46-206ENST00000360212 PKP1Q13835 747 aa10.73□□□□□ -0.69
CD46-206ENST00000360212 RAB3GAP1Q15042 981 aa10.73□□□□□ -0.69
CD46-206ENST00000360212 ITPRIPQ8IWB1 547 aa10.73□□□□□ -0.69
CD46-206ENST00000360212 ROCK1Q13464 1354 aa10.73□□□□□ -0.69
CD46-206ENST00000360212 ZNF608Q9ULD9 1512 aaPredicted RBP10.73□□□□□ -0.69
CD46-206ENST00000360212 ZSCAN20P17040 1043 aaPredicted RBP10.73□□□□□ -0.69
CD46-206ENST00000360212 SKOR2Q2VWA4 1001 aaPredicted RBP10.73□□□□□ -0.69
CD46-206ENST00000360212 ISY1Q9ULR0 285 aaKnown RBP10.73□□□□□ -0.69
CD46-206ENST00000360212 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
CD46-206ENST00000360212 PLEKHH2Q8IVE3 1493 aa10.72□□□□□ -0.69
CD46-206ENST00000360212 PRPF40AO75400 957 aaKnown RBP10.72□□□□□ -0.69
CD46-206ENST00000360212 BAG4O95429 457 aaKnown RBP10.72□□□□□ -0.69
CD46-206ENST00000360212 ZSCAN23Q3MJ62 389 aa10.72□□□□□ -0.69
CD46-206ENST00000360212 UTP14CQ5TAP6 766 aaKnown RBP10.72□□□□□ -0.69
CD46-206ENST00000360212 KIF21AQ7Z4S6 1674 aa10.72□□□□□ -0.69
CD46-206ENST00000360212 ARHGEF11O15085 1522 aa10.71□□□□□ -0.69
CD46-206ENST00000360212 NOL7Q9UMY1 257 aaKnown RBP10.71□□□□□ -0.69
CD46-206ENST00000360212 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.7
CD46-206ENST00000360212 ANKRD50Q9ULJ7 1429 aa10.71□□□□□ -0.7
CD46-206ENST00000360212 SYCE3A1L190 88 aa10.71□□□□□ -0.7
CD46-206ENST00000360212 TSR2Q969E8 191 aaKnown RBP10.71□□□□□ -0.7
CD46-206ENST00000360212 ERBINQ96RT1 1412 aa10.7□□□□□ -0.7
CD46-206ENST00000360212 UHRF1BP1Q6BDS2 1440 aa10.7□□□□□ -0.7
CD46-206ENST00000360212 CCDC94Q9BW85 323 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms