RNA–Protein interactions for RNA: ENST00000360115.8

MACF1-202, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-202ENST00000360115 WDR43Q15061 677 aaKnown RBP eCLIP17.43■□□□□ 0.38
MACF1-202ENST00000360115 GOLGA2Q08379 1002 aa17.43■□□□□ 0.38
MACF1-202ENST00000360115 PIK3C2GO75747 1445 aa17.43■□□□□ 0.38
MACF1-202ENST00000360115 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
MACF1-202ENST00000360115 VIRMAQ69YN4 1812 aaKnown RBP17.41■□□□□ 0.38
MACF1-202ENST00000360115 SLC4A3P48751 1232 aa17.41■□□□□ 0.38
MACF1-202ENST00000360115 ABCC2Q92887 1545 aa17.41■□□□□ 0.38
MACF1-202ENST00000360115 MADDQ8WXG6 1647 aa17.4■□□□□ 0.38
MACF1-202ENST00000360115 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
MACF1-202ENST00000360115 ASXL1Q8IXJ9 1541 aa17.4■□□□□ 0.38
MACF1-202ENST00000360115 DUOX2Q9NRD8 1548 aa17.4■□□□□ 0.38
MACF1-202ENST00000360115 SLFN5Q08AF3 891 aa17.4■□□□□ 0.38
MACF1-202ENST00000360115 TRMT2AQ8IZ69 625 aaKnown RBP17.4■□□□□ 0.38
MACF1-202ENST00000360115 BRPF3Q9ULD4 1205 aa17.4■□□□□ 0.38
MACF1-202ENST00000360115 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
MACF1-202ENST00000360115 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.38
MACF1-202ENST00000360115 NPC1L1Q9UHC9 1359 aa17.39■□□□□ 0.37
MACF1-202ENST00000360115 FBLN2P98095 1184 aa17.38■□□□□ 0.37
MACF1-202ENST00000360115 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
MACF1-202ENST00000360115 TTC37Q6PGP7 1564 aa17.37■□□□□ 0.37
MACF1-202ENST00000360115 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
MACF1-202ENST00000360115 CDCA8Q53HL2 280 aa17.36■□□□□ 0.37
MACF1-202ENST00000360115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.378e-7■■■■□ 23.7
MACF1-202ENST00000360115 MYOM1P52179 1685 aa17.36■□□□□ 0.37
MACF1-202ENST00000360115 SPHKAPQ2M3C7 1700 aa17.35■□□□□ 0.37
MACF1-202ENST00000360115 SCAF11Q99590 1463 aaKnown RBP17.34■□□□□ 0.37
MACF1-202ENST00000360115 SCAPERQ9BY12 1400 aa17.34■□□□□ 0.37
MACF1-202ENST00000360115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.34■□□□□ 0.37
MACF1-202ENST00000360115 RGS3P49796 1198 aa17.32■□□□□ 0.36
MACF1-202ENST00000360115 NINLQ9Y2I6 1382 aa17.31■□□□□ 0.36
MACF1-202ENST00000360115 FRAT2O75474 233 aaPredicted RBP17.31■□□□□ 0.36
MACF1-202ENST00000360115 NGEFQ8N5V2 710 aa17.3■□□□□ 0.36
MACF1-202ENST00000360115 CEP152O94986 1710 aa17.3■□□□□ 0.36
MACF1-202ENST00000360115 STAC3Q96MF2 364 aa17.3■□□□□ 0.36
MACF1-202ENST00000360115 TRPM2O94759 1503 aa17.3■□□□□ 0.36
MACF1-202ENST00000360115 E9PSI1 815 aa17.29■□□□□ 0.36
MACF1-202ENST00000360115 KDM5AP29375 1690 aaKnown RBP17.29■□□□□ 0.36
MACF1-202ENST00000360115 USP19O94966 1318 aa17.29■□□□□ 0.36
MACF1-202ENST00000360115 CGNL1Q0VF96 1302 aa17.28■□□□□ 0.36
MACF1-202ENST00000360115 KIAA1210Q9ULL0 1709 aa17.28■□□□□ 0.36
MACF1-202ENST00000360115 PDE3AQ14432 1141 aa17.27■□□□□ 0.36
MACF1-202ENST00000360115 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.36
MACF1-202ENST00000360115 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
MACF1-202ENST00000360115 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.26■□□□□ 0.35
MACF1-202ENST00000360115 APAF1O14727 1248 aa17.25■□□□□ 0.35
MACF1-202ENST00000360115 BCAR3O75815 825 aa17.25■□□□□ 0.35
MACF1-202ENST00000360115 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
MACF1-202ENST00000360115 IGHDP01880 384 aa17.24■□□□□ 0.35
MACF1-202ENST00000360115 FAM43AQ8N2R8 423 aa17.24■□□□□ 0.35
MACF1-202ENST00000360115 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
MACF1-202ENST00000360115 PTPRTO14522 1441 aa17.24■□□□□ 0.35
MACF1-202ENST00000360115 ZMYM3Q14202 1370 aa17.23■□□□□ 0.35
MACF1-202ENST00000360115 CLTCL1P53675 1640 aa17.23■□□□□ 0.35
MACF1-202ENST00000360115 BECN1Q14457 450 aa17.22■□□□□ 0.35
MACF1-202ENST00000360115 NEURL4Q96JN8 1562 aa17.22■□□□□ 0.35
MACF1-202ENST00000360115 CLUAP1Q96AJ1 413 aa17.22■□□□□ 0.35
MACF1-202ENST00000360115 ABCC1P33527 1531 aa17.21■□□□□ 0.35
MACF1-202ENST00000360115 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
MACF1-202ENST00000360115 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
MACF1-202ENST00000360115 AAMPQ13685 434 aa17.2■□□□□ 0.34
MACF1-202ENST00000360115 DEPDC5O75140 1603 aa17.19■□□□□ 0.34
MACF1-202ENST00000360115 PLCH2O75038 1416 aa17.18■□□□□ 0.34
MACF1-202ENST00000360115 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
MACF1-202ENST00000360115 POLR3AO14802 1390 aaPredicted RBP17.18■□□□□ 0.34
MACF1-202ENST00000360115 DMRT2Q9Y5R5 561 aa17.18■□□□□ 0.34
MACF1-202ENST00000360115 TET3O43151 1660 aa17.17■□□□□ 0.34
MACF1-202ENST00000360115 SEC24BO95487 1268 aa17.16■□□□□ 0.34
MACF1-202ENST00000360115 PMFBP1Q8TBY8 1022 aa17.15■□□□□ 0.34
MACF1-202ENST00000360115 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
MACF1-202ENST00000360115 MYOM2P54296 1465 aa17.15■□□□□ 0.34
MACF1-202ENST00000360115 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
MACF1-202ENST00000360115 MYO3AQ8NEV4 1616 aa17.15■□□□□ 0.34
MACF1-202ENST00000360115 WWC1Q8IX03 1113 aa17.15■□□□□ 0.34
MACF1-202ENST00000360115 ANTXR1Q9H6X2 564 aa17.15■□□□□ 0.34
MACF1-202ENST00000360115 COG6Q9Y2V7 657 aa17.15■□□□□ 0.34
MACF1-202ENST00000360115 MAP3K4Q9Y6R4 1608 aa17.14■□□□□ 0.33
MACF1-202ENST00000360115 RTEL1-TNFRSF6BF6WH68 1400 aa17.14■□□□□ 0.33
MACF1-202ENST00000360115 CANXP27824 592 aaKnown RBP17.14■□□□□ 0.33
MACF1-202ENST00000360115 POGKQ9P215 609 aa17.14■□□□□ 0.33
MACF1-202ENST00000360115 PANK1Q8TE04 598 aa17.14■□□□□ 0.33
MACF1-202ENST00000360115 ABCA6Q8N139 1617 aa17.14■□□□□ 0.33
MACF1-202ENST00000360115 TRAPPC8Q9Y2L5 1435 aa17.13■□□□□ 0.33
MACF1-202ENST00000360115 L1TD1Q5T7N2 865 aaKnown RBP17.13■□□□□ 0.33
MACF1-202ENST00000360115 IQSEC2Q5JU85 1478 aa17.13■□□□□ 0.33
MACF1-202ENST00000360115 ZFYVE16Q7Z3T8 1539 aa17.13■□□□□ 0.33
MACF1-202ENST00000360115 VWDEQ8N2E2 1590 aa17.12■□□□□ 0.33
MACF1-202ENST00000360115 EFCAB2Q5VUJ9 269 aa17.12■□□□□ 0.33
MACF1-202ENST00000360115 TBC1D32Q96NH3 1257 aa17.12■□□□□ 0.33
MACF1-202ENST00000360115 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
MACF1-202ENST00000360115 UPF2Q9HAU5 1272 aaKnown RBP17.11■□□□□ 0.33
MACF1-202ENST00000360115 SBNO2Q9Y2G9 1366 aa17.11■□□□□ 0.33
MACF1-202ENST00000360115 RARSP54136 660 aaKnown RBP17.1■□□□□ 0.33
MACF1-202ENST00000360115 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
MACF1-202ENST00000360115 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
MACF1-202ENST00000360115 UBE2Q2Q8WVN8 375 aa17.09■□□□□ 0.33
MACF1-202ENST00000360115 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
MACF1-202ENST00000360115 ARAP3Q8WWN8 1544 aa17.07■□□□□ 0.32
MACF1-202ENST00000360115 KANK1Q14678 1352 aa17.07■□□□□ 0.32
MACF1-202ENST00000360115 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
MACF1-202ENST00000360115 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms