RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 CCDC39Q9UFE4 941 aa17.71■□□□□ 0.43
NUP98-203ENST00000359171 RNF20Q5VTR2 975 aa17.71■□□□□ 0.43
NUP98-203ENST00000359171 FRAT2O75474 233 aaPredicted RBP17.71■□□□□ 0.43
NUP98-203ENST00000359171 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
NUP98-203ENST00000359171 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
NUP98-203ENST00000359171 HSP90B2PQ58FF3 399 aa17.7■□□□□ 0.42
NUP98-203ENST00000359171 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
NUP98-203ENST00000359171 CPLX1O14810 134 aa17.69■□□□□ 0.42
NUP98-203ENST00000359171 KIF3BO15066 747 aa17.69■□□□□ 0.42
NUP98-203ENST00000359171 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
NUP98-203ENST00000359171 VPS53Q5VIR6 699 aa17.69■□□□□ 0.42
NUP98-203ENST00000359171 INTS3Q68E01 1043 aaKnown RBP17.69■□□□□ 0.42
NUP98-203ENST00000359171 AK7Q96M32 723 aa17.69■□□□□ 0.42
NUP98-203ENST00000359171 ANO2Q9NQ90 1003 aa17.68■□□□□ 0.42
NUP98-203ENST00000359171 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
NUP98-203ENST00000359171 PCMTD1Q96MG8 357 aaPredicted RBP17.68■□□□□ 0.42
NUP98-203ENST00000359171 SMC3Q9UQE7 1217 aa17.68■□□□□ 0.42
NUP98-203ENST00000359171 PATL2C9JE40 543 aaKnown RBP17.68■□□□□ 0.42
NUP98-203ENST00000359171 CCDC73Q6ZRK6 1079 aa17.68■□□□□ 0.42
NUP98-203ENST00000359171 APAF1O14727 1248 aa17.68■□□□□ 0.42
NUP98-203ENST00000359171 RUFY1Q96T51 708 aa17.68■□□□□ 0.42
NUP98-203ENST00000359171 C22orf23Q9BZE7 217 aa17.67■□□□□ 0.42
NUP98-203ENST00000359171 NACADO15069 1562 aa17.66■□□□□ 0.42
NUP98-203ENST00000359171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.66■□□□□ 0.42
NUP98-203ENST00000359171 VPS37CA5D8V6 355 aaPredicted RBP17.66■□□□□ 0.42
NUP98-203ENST00000359171 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
NUP98-203ENST00000359171 NASPP49321 788 aaPredicted RBP17.66■□□□□ 0.42
NUP98-203ENST00000359171 R3HCC1Q9Y3T6 440 aaKnown RBP17.65■□□□□ 0.42
NUP98-203ENST00000359171 RRP12Q5JTH9 1297 aaKnown RBP17.65■□□□□ 0.42
NUP98-203ENST00000359171 NEXNQ0ZGT2 675 aa17.65■□□□□ 0.42
NUP98-203ENST00000359171 CCDC144AA2RUR9 1427 aa17.65■□□□□ 0.42
NUP98-203ENST00000359171 CCDC66A2RUB6 948 aa17.64■□□□□ 0.41
NUP98-203ENST00000359171 IFIT2P09913 472 aaKnown RBP17.64■□□□□ 0.41
NUP98-203ENST00000359171 CWC15Q9P013 229 aaKnown RBP17.64■□□□□ 0.41
NUP98-203ENST00000359171 USP47Q96K76 1375 aa17.64■□□□□ 0.41
NUP98-203ENST00000359171 G3V3G9 751 aa17.64■□□□□ 0.41
NUP98-203ENST00000359171 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.41
NUP98-203ENST00000359171 GTF2E1P29083 439 aaPredicted RBP17.63■□□□□ 0.41
NUP98-203ENST00000359171 TRAK1Q9UPV9 953 aa17.63■□□□□ 0.41
NUP98-203ENST00000359171 UACAQ9BZF9 1416 aa17.63■□□□□ 0.41
NUP98-203ENST00000359171 HMGN5P82970 282 aaKnown RBP17.62■□□□□ 0.41
NUP98-203ENST00000359171 COG3Q96JB2 828 aa17.62■□□□□ 0.41
NUP98-203ENST00000359171 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
NUP98-203ENST00000359171 MBD3O95983 291 aa17.62■□□□□ 0.41
NUP98-203ENST00000359171 ERCC4Q92889 916 aaPredicted RBP17.62■□□□□ 0.41
NUP98-203ENST00000359171 LTV1Q96GA3 475 aaPredicted RBP17.62■□□□□ 0.41
NUP98-203ENST00000359171 TRDNQ13061 729 aa17.61■□□□□ 0.41
NUP98-203ENST00000359171 NAT10Q9H0A0 1025 aaKnown RBP17.61■□□□□ 0.41
NUP98-203ENST00000359171 CCDC18Q5T9S5 1454 aa17.61■□□□□ 0.41
NUP98-203ENST00000359171 C9orf78Q9NZ63 289 aaPredicted RBP17.61■□□□□ 0.41
NUP98-203ENST00000359171 EVC2Q86UK5 1308 aa17.6■□□□□ 0.41
NUP98-203ENST00000359171 EID1Q9Y6B2 187 aa17.6■□□□□ 0.41
NUP98-203ENST00000359171 TEFQ10587 303 aa17.6■□□□□ 0.41
NUP98-203ENST00000359171 CDC45O75419 566 aa17.6■□□□□ 0.41
NUP98-203ENST00000359171 LETM1O95202 739 aaPredicted RBP17.6■□□□□ 0.41
NUP98-203ENST00000359171 HNRNPMP52272 730 aaKnown RBP eCLIP17.59■□□□□ 0.41
NUP98-203ENST00000359171 AMOTL1Q8IY63 956 aa17.59■□□□□ 0.41
NUP98-203ENST00000359171 C1orf141Q5JVX7 400 aa17.58■□□□□ 0.41
NUP98-203ENST00000359171 TRAK2O60296 914 aa17.58■□□□□ 0.4
NUP98-203ENST00000359171 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.4
NUP98-203ENST00000359171 WASHC2CQ9Y4E1 1318 aa17.58■□□□□ 0.4
NUP98-203ENST00000359171 ERC2O15083 957 aa17.58■□□□□ 0.4
NUP98-203ENST00000359171 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.4
NUP98-203ENST00000359171 DCTN1Q14203 1278 aa17.58■□□□□ 0.4
NUP98-203ENST00000359171 DIAPH1O60610 1272 aaKnown RBP17.57■□□□□ 0.4
NUP98-203ENST00000359171 SAFBQ15424 915 aaKnown RBP eCLIP17.57■□□□□ 0.4
NUP98-203ENST00000359171 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
NUP98-203ENST00000359171 G3BP1Q13283 466 aaKnown RBP eCLIP17.56■□□□□ 0.42e-6■■■□□ 15
NUP98-203ENST00000359171 RUNDC1Q96C34 613 aa17.56■□□□□ 0.4
NUP98-203ENST00000359171 LNPKQ9C0E8 428 aa17.56■□□□□ 0.4
NUP98-203ENST00000359171 CCDC173Q0VFZ6 552 aa17.55■□□□□ 0.4
NUP98-203ENST00000359171 CCDC191Q8NCU4 936 aa17.55■□□□□ 0.4
NUP98-203ENST00000359171 RIPK4P57078 832 aa17.55■□□□□ 0.4
NUP98-203ENST00000359171 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.55■□□□□ 0.4
NUP98-203ENST00000359171 H0YHG0 523 aa17.55■□□□□ 0.4
NUP98-203ENST00000359171 CCP110O43303 1012 aa17.55■□□□□ 0.4
NUP98-203ENST00000359171 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
NUP98-203ENST00000359171 GNAI1P63096 354 aa17.55■□□□□ 0.4
NUP98-203ENST00000359171 OLFM4Q6UX06 510 aa17.55■□□□□ 0.4
NUP98-203ENST00000359171 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
NUP98-203ENST00000359171 NOL10Q9BSC4 688 aaKnown RBP17.54■□□□□ 0.4
NUP98-203ENST00000359171 APPP05067 770 aa17.53■□□□□ 0.4
NUP98-203ENST00000359171 RNF214Q8ND24 703 aa17.53■□□□□ 0.4
NUP98-203ENST00000359171 SDF4Q9BRK5 362 aa17.53■□□□□ 0.4
NUP98-203ENST00000359171 FKBP5Q13451 457 aaPredicted RBP17.53■□□□□ 0.4
NUP98-203ENST00000359171 NUTM2DQ5VT03 806 aaPredicted RBP17.53■□□□□ 0.4
NUP98-203ENST00000359171 NFXL1Q6ZNB6 911 aa17.53■□□□□ 0.4
NUP98-203ENST00000359171 ERICH2A1L162 156 aa17.52■□□□□ 0.4
NUP98-203ENST00000359171 NAP1L1P55209 391 aaKnown RBP17.52■□□□□ 0.4
NUP98-203ENST00000359171 MCM2P49736 904 aa17.52■□□□□ 0.39
NUP98-203ENST00000359171 TTC5Q8N0Z6 440 aa17.52■□□□□ 0.39
NUP98-203ENST00000359171 FHOD3Q2V2M9 1422 aa17.52■□□□□ 0.39
NUP98-203ENST00000359171 TRIM5Q9C035 493 aa17.52■□□□□ 0.39
NUP98-203ENST00000359171 DHX8Q14562 1220 aaKnown RBP17.51■□□□□ 0.39
NUP98-203ENST00000359171 TCEAL9Q9UHQ7 104 aa17.51■□□□□ 0.39
NUP98-203ENST00000359171 TSPY26PQ9H489 355 aa17.51■□□□□ 0.39
NUP98-203ENST00000359171 EIF2S2P20042 333 aaKnown RBP17.51■□□□□ 0.39
NUP98-203ENST00000359171 PSMA5P28066 241 aa17.5■□□□□ 0.39
NUP98-203ENST00000359171 RDXP35241 583 aaKnown RBP17.5■□□□□ 0.39
NUP98-203ENST00000359171 CAVIN1Q6NZI2 390 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms