RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 WDR43Q15061 677 aaKnown RBP eCLIP20.13■□□□□ 0.818e-6■■□□□ 11.7
PTBP1-203ENST00000356948 NUTM2DQ5VT03 806 aaPredicted RBP20.13■□□□□ 0.81
PTBP1-203ENST00000356948 CHGAP10645 457 aaKnown RBP20.13■□□□□ 0.81
PTBP1-203ENST00000356948 DUSP27Q5VZP5 1158 aa20.13■□□□□ 0.81
PTBP1-203ENST00000356948 SCAPERQ9BY12 1400 aa20.12■□□□□ 0.81
PTBP1-203ENST00000356948 CARD14Q9BXL6 1004 aa20.12■□□□□ 0.81
PTBP1-203ENST00000356948 ABCC1P33527 1531 aa20.12■□□□□ 0.81
PTBP1-203ENST00000356948 APAF1O14727 1248 aa20.11■□□□□ 0.81
PTBP1-203ENST00000356948 SLC4A3P48751 1232 aa20.11■□□□□ 0.81
PTBP1-203ENST00000356948 BACH2Q9BYV9 841 aa20.1■□□□□ 0.81
PTBP1-203ENST00000356948 MADDQ8WXG6 1647 aa20.09■□□□□ 0.81
PTBP1-203ENST00000356948 IL27Q8NEV9 243 aa20.09■□□□□ 0.81
PTBP1-203ENST00000356948 CLTCL1P53675 1640 aa20.09■□□□□ 0.81
PTBP1-203ENST00000356948 BCAR3O75815 825 aa20.09■□□□□ 0.81
PTBP1-203ENST00000356948 WASHC2CQ9Y4E1 1318 aa20.08■□□□□ 0.81
PTBP1-203ENST00000356948 NEUROD2Q15784 382 aa20.06■□□□□ 0.8
PTBP1-203ENST00000356948 TMEM132EQ6IEE7 984 aa20.06■□□□□ 0.8
PTBP1-203ENST00000356948 TCERG1O14776 1098 aaKnown RBP20.05■□□□□ 0.8
PTBP1-203ENST00000356948 RNF17Q9BXT8 1623 aaKnown RBP20.05■□□□□ 0.8
PTBP1-203ENST00000356948 EIF2AK4Q9P2K8 1649 aaKnown RBP20.05■□□□□ 0.8
PTBP1-203ENST00000356948 ZMYM4Q5VZL5 1548 aa20.05■□□□□ 0.8
PTBP1-203ENST00000356948 TRAK1Q9UPV9 953 aa20.04■□□□□ 0.8
PTBP1-203ENST00000356948 ZFYVE16Q7Z3T8 1539 aa20.04■□□□□ 0.8
PTBP1-203ENST00000356948 RRP7AQ9Y3A4 280 aaKnown RBP20.04■□□□□ 0.8
PTBP1-203ENST00000356948 LAMC1P11047 1609 aa20.03■□□□□ 0.8
PTBP1-203ENST00000356948 SCAF11Q99590 1463 aaKnown RBP20.03■□□□□ 0.8
PTBP1-203ENST00000356948 GOLGA2Q08379 1002 aa20.03■□□□□ 0.8
PTBP1-203ENST00000356948 CFAP65Q6ZU64 1925 aaKnown RBP20.03■□□□□ 0.8
PTBP1-203ENST00000356948 ZNF521Q96K83 1311 aa20.03■□□□□ 0.8
PTBP1-203ENST00000356948 RGS3P49796 1198 aa20.01■□□□□ 0.79
PTBP1-203ENST00000356948 GGT6Q6P531 493 aa20.01■□□□□ 0.79
PTBP1-203ENST00000356948 FANCAO15360 1455 aa20■□□□□ 0.79
PTBP1-203ENST00000356948 SLC12A5Q9H2X9 1139 aa20■□□□□ 0.79
PTBP1-203ENST00000356948 IQGAP1P46940 1657 aa20■□□□□ 0.79
PTBP1-203ENST00000356948 TRPM2O94759 1503 aa20■□□□□ 0.79
PTBP1-203ENST00000356948 PTPRTO14522 1441 aa19.99■□□□□ 0.79
PTBP1-203ENST00000356948 SLFN5Q08AF3 891 aa19.99■□□□□ 0.79
PTBP1-203ENST00000356948 SPHKAPQ2M3C7 1700 aa19.97■□□□□ 0.79
PTBP1-203ENST00000356948 SAFB2Q14151 953 aaKnown RBP eCLIP19.97■□□□□ 0.79
PTBP1-203ENST00000356948 KDM2BQ8NHM5 1336 aa19.97■□□□□ 0.79
PTBP1-203ENST00000356948 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
PTBP1-203ENST00000356948 MYOM1P52179 1685 aa19.96■□□□□ 0.79
PTBP1-203ENST00000356948 TNNQ9UQP3 1299 aa19.96■□□□□ 0.79
PTBP1-203ENST00000356948 ERVK-7P63135 1459 aa19.96■□□□□ 0.79
PTBP1-203ENST00000356948 CLASP1Q7Z460 1538 aa19.95■□□□□ 0.78
PTBP1-203ENST00000356948 ATP7AQ04656 1500 aa19.94■□□□□ 0.78
PTBP1-203ENST00000356948 ADGRL1O94910 1474 aa19.94■□□□□ 0.78
PTBP1-203ENST00000356948 BCL2L13Q9BXK5 485 aa19.93■□□□□ 0.78
PTBP1-203ENST00000356948 CEP152O94986 1710 aa19.93■□□□□ 0.78
PTBP1-203ENST00000356948 IGHDP01880 384 aa19.92■□□□□ 0.78
PTBP1-203ENST00000356948 PANK1Q8TE04 598 aa19.92■□□□□ 0.78
PTBP1-203ENST00000356948 KANK1Q14678 1352 aa19.92■□□□□ 0.78
PTBP1-203ENST00000356948 CDCA8Q53HL2 280 aa19.92■□□□□ 0.78
PTBP1-203ENST00000356948 NOS1P29475 1434 aa19.92■□□□□ 0.78
PTBP1-203ENST00000356948 NEFMP07197 916 aa19.91■□□□□ 0.78
PTBP1-203ENST00000356948 RTEL1-TNFRSF6BF6WH68 1400 aa19.91■□□□□ 0.78
PTBP1-203ENST00000356948 UHRF1BP1LA0JNW5 1464 aa19.9■□□□□ 0.78
PTBP1-203ENST00000356948 SYNMO15061 1565 aa19.9■□□□□ 0.78
PTBP1-203ENST00000356948 ABCA6Q8N139 1617 aa19.9■□□□□ 0.78
PTBP1-203ENST00000356948 MS4A1P11836 297 aa19.89■□□□□ 0.78
PTBP1-203ENST00000356948 FRAT1Q92837 279 aaPredicted RBP19.89■□□□□ 0.77
PTBP1-203ENST00000356948 TRMT2AQ8IZ69 625 aaKnown RBP19.89■□□□□ 0.77
PTBP1-203ENST00000356948 MROH1Q8NDA8 1641 aa19.88■□□□□ 0.77
PTBP1-203ENST00000356948 COG6Q9Y2V7 657 aa19.88■□□□□ 0.77
PTBP1-203ENST00000356948 C8orf34Q49A92 452 aa19.88■□□□□ 0.77
PTBP1-203ENST00000356948 MROH2AA6NES4 1674 aa19.87■□□□□ 0.77
PTBP1-203ENST00000356948 RAPGEF3O95398 923 aa19.87■□□□□ 0.77
PTBP1-203ENST00000356948 ASXL2Q76L83 1435 aa19.87■□□□□ 0.77
PTBP1-203ENST00000356948 PIK3C2GO75747 1445 aa19.86■□□□□ 0.77
PTBP1-203ENST00000356948 TET3O43151 1660 aa19.86■□□□□ 0.77
PTBP1-203ENST00000356948 DEPDC5O75140 1603 aa19.86■□□□□ 0.77
PTBP1-203ENST00000356948 WWC1Q8IX03 1113 aa19.86■□□□□ 0.77
PTBP1-203ENST00000356948 EIF3AQ14152 1382 aaKnown RBP19.86■□□□□ 0.77
PTBP1-203ENST00000356948 MORC1Q86VD1 984 aa19.85■□□□□ 0.77
PTBP1-203ENST00000356948 NSD3Q9BZ95 1437 aa19.85■□□□□ 0.77
PTBP1-203ENST00000356948 DAXXQ9UER7 740 aaPredicted RBP19.85■□□□□ 0.77
PTBP1-203ENST00000356948 CENPJQ9HC77 1338 aaPredicted RBP19.85■□□□□ 0.77
PTBP1-203ENST00000356948 INO80Q9ULG1 1556 aaPredicted RBP19.84■□□□□ 0.77
PTBP1-203ENST00000356948 CENPQQ7L2Z9 268 aaPredicted RBP19.84■□□□□ 0.77
PTBP1-203ENST00000356948 CLUAP1Q96AJ1 413 aa19.83■□□□□ 0.77
PTBP1-203ENST00000356948 INSRP06213 1382 aa19.83■□□□□ 0.77
PTBP1-203ENST00000356948 STK26Q9P289 416 aa19.83■□□□□ 0.76
PTBP1-203ENST00000356948 MAP3K4Q9Y6R4 1608 aa19.83■□□□□ 0.76
PTBP1-203ENST00000356948 MTHFSP49914 203 aa19.83■□□□□ 0.76
PTBP1-203ENST00000356948 VWDEQ8N2E2 1590 aa19.83■□□□□ 0.76
PTBP1-203ENST00000356948 CABP2Q9NPB3 220 aa19.83■□□□□ 0.76
PTBP1-203ENST00000356948 KDM5AP29375 1690 aaKnown RBP19.82■□□□□ 0.76
PTBP1-203ENST00000356948 SEC24BO95487 1268 aa19.82■□□□□ 0.76
PTBP1-203ENST00000356948 PPRC1Q5VV67 1664 aaKnown RBP19.82■□□□□ 0.76
PTBP1-203ENST00000356948 RLBP1P12271 317 aa19.82■□□□□ 0.76
PTBP1-203ENST00000356948 TCP11L2Q8N4U5 519 aa19.81■□□□□ 0.76
PTBP1-203ENST00000356948 ABCA9Q8IUA7 1624 aa19.81■□□□□ 0.76
PTBP1-203ENST00000356948 NKTRP30414 1462 aaKnown RBP19.8■□□□□ 0.76
PTBP1-203ENST00000356948 NPATQ14207 1427 aa19.79■□□□□ 0.76
PTBP1-203ENST00000356948 KIDINS220Q9ULH0 1771 aa19.79■□□□□ 0.76
PTBP1-203ENST00000356948 E9PSI1 815 aa19.79■□□□□ 0.76
PTBP1-203ENST00000356948 CANXP27824 592 aaKnown RBP19.79■□□□□ 0.76
PTBP1-203ENST00000356948 FBLN1P23142 703 aa19.78■□□□□ 0.76
PTBP1-203ENST00000356948 ARXQ96QS3 562 aa19.78■□□□□ 0.76
PTBP1-203ENST00000356948 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms