RNA–Protein interactions for RNA: ENST00000355540.7

TRRAP-201, Transcript of transformation/transcription domain associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRRAP, Length 12,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAP-201ENST00000355540 NINLQ9Y2I6 1382 aa8.86□□□□□ -0.99
TRRAP-201ENST00000355540 GBP2P32456 591 aaPredicted RBP8.85□□□□□ -0.99
TRRAP-201ENST00000355540 HMGN5P82970 282 aaKnown RBP8.85□□□□□ -0.99
TRRAP-201ENST00000355540 SEPT11Q9NVA2 429 aaKnown RBP8.85□□□□□ -0.99
TRRAP-201ENST00000355540 SRPK2P78362 688 aaKnown RBP8.85□□□□□ -0.99
TRRAP-201ENST00000355540 MCM3P25205 808 aa8.85□□□□□ -0.99
TRRAP-201ENST00000355540 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRRAP-201ENST00000355540 V9GYY5 206 aaPredicted RBP8.85□□□□□ -0.99
TRRAP-201ENST00000355540 PODXL2Q9NZ53 605 aa8.85□□□□□ -0.99
TRRAP-201ENST00000355540 IFT140Q96RY7 1462 aa8.85□□□□□ -0.99
TRRAP-201ENST00000355540 TSPYL1Q9H0U9 437 aa8.84□□□□□ -0.99
TRRAP-201ENST00000355540 FAM114A2Q9NRY5 505 aa8.84□□□□□ -0.99
TRRAP-201ENST00000355540 G3V3G9 751 aa8.84□□□□□ -0.99
TRRAP-201ENST00000355540 HSP90AB4PQ58FF6 505 aa8.84□□□□□ -0.99
TRRAP-201ENST00000355540 DCAF8Q5TAQ9 597 aa8.84□□□□□ -0.99
TRRAP-201ENST00000355540 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.84□□□□□ -0.99
TRRAP-201ENST00000355540 MIA2Q96PC5 1412 aa8.84□□□□□ -0.99
TRRAP-201ENST00000355540 CCDC43Q96MW1 224 aaKnown RBP8.84□□□□□ -0.99
TRRAP-201ENST00000355540 FAM107BQ9H098 131 aa8.84□□□□□ -0.99
TRRAP-201ENST00000355540 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
TRRAP-201ENST00000355540 LAMC3Q9Y6N6 1575 aa8.83□□□□□ -1
TRRAP-201ENST00000355540 MCM2P49736 904 aa8.83□□□□□ -1
TRRAP-201ENST00000355540 AEBP1Q8IUX7 1158 aa8.83□□□□□ -1
TRRAP-201ENST00000355540 DNMBPQ6XZF7 1577 aa8.83□□□□□ -1
TRRAP-201ENST00000355540 RAD54L2Q9Y4B4 1467 aa8.83□□□□□ -1
TRRAP-201ENST00000355540 TRIM34Q9BYJ4 488 aa8.83□□□□□ -1
TRRAP-201ENST00000355540 DHX16O60231 1041 aaKnown RBP8.83□□□□□ -1
TRRAP-201ENST00000355540 TPD52L1Q16890 204 aaPredicted RBP8.83□□□□□ -1
TRRAP-201ENST00000355540 ZKSCAN1P17029 563 aaPredicted RBP8.83□□□□□ -1
TRRAP-201ENST00000355540 GRIN2BQ13224 1484 aa8.83□□□□□ -1
TRRAP-201ENST00000355540 CUL7Q14999 1698 aa8.83□□□□□ -1
TRRAP-201ENST00000355540 PDCP20941 246 aa8.83□□□□□ -1
TRRAP-201ENST00000355540 HOXA7P31268 230 aaPredicted RBP8.83□□□□□ -1
TRRAP-201ENST00000355540 GOLGA6L10A6NI86 522 aa8.82□□□□□ -1
TRRAP-201ENST00000355540 FYB1O15117 783 aa8.82□□□□□ -1
TRRAP-201ENST00000355540 HIRIP3Q9BW71 556 aaPredicted RBP8.82□□□□□ -1
TRRAP-201ENST00000355540 KIF21BO75037 1637 aa8.82□□□□□ -1
TRRAP-201ENST00000355540 TRIM29Q14134 588 aa8.82□□□□□ -1
TRRAP-201ENST00000355540 HIP1O00291 1037 aa8.82□□□□□ -1
TRRAP-201ENST00000355540 TOP2BQ02880 1626 aa8.82□□□□□ -1
TRRAP-201ENST00000355540 HECW1Q76N89 1606 aa8.82□□□□□ -1
TRRAP-201ENST00000355540 NUP155O75694 1391 aa8.82□□□□□ -1
TRRAP-201ENST00000355540 DIAPH3Q9NSV4 1193 aa8.82□□□□□ -1
TRRAP-201ENST00000355540 ZNF710Q8N1W2 664 aa8.81□□□□□ -1
TRRAP-201ENST00000355540 CT47A1Q5JQC4 288 aaPredicted RBP8.81□□□□□ -1
TRRAP-201ENST00000355540 GORABQ5T7V8 394 aa8.81□□□□□ -1
TRRAP-201ENST00000355540 WDHD1O75717 1129 aaPredicted RBP8.81□□□□□ -1
TRRAP-201ENST00000355540 TUBB4BP68371 445 aa8.81□□□□□ -1
TRRAP-201ENST00000355540 SPATA24Q86W54 205 aa8.81□□□□□ -1
TRRAP-201ENST00000355540 SUPT6HQ7KZ85 1726 aaKnown RBP8.81□□□□□ -1
TRRAP-201ENST00000355540 NEFHP12036 1026 aa8.81□□□□□ -1
TRRAP-201ENST00000355540 USH1CQ9Y6N9 552 aa8.81□□□□□ -1
TRRAP-201ENST00000355540 DAPK1P53355 1430 aa8.81□□□□□ -1
TRRAP-201ENST00000355540 CFAP57Q96MR6 1250 aa8.8□□□□□ -1
TRRAP-201ENST00000355540 STK26Q9P289 416 aa8.8□□□□□ -1
TRRAP-201ENST00000355540 CTDP1Q9Y5B0 961 aaPredicted RBP8.8□□□□□ -1
TRRAP-201ENST00000355540 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.8□□□□□ -1
TRRAP-201ENST00000355540 DZIP1LQ8IYY4 767 aaKnown RBP8.8□□□□□ -1
TRRAP-201ENST00000355540 ARHGAP5Q13017 1502 aa8.8□□□□□ -1
TRRAP-201ENST00000355540 PKD2Q13563 968 aa8.8□□□□□ -1
TRRAP-201ENST00000355540 CYB5RLQ6IPT4 315 aa8.8□□□□□ -1
TRRAP-201ENST00000355540 SAFBQ15424 915 aaKnown RBP eCLIP8.8□□□□□ -1
TRRAP-201ENST00000355540 SLC3A2P08195 630 aaKnown RBP8.8□□□□□ -1
TRRAP-201ENST00000355540 SH3BGRP55822 239 aaPredicted RBP8.8□□□□□ -1
TRRAP-201ENST00000355540 ERICH2A1L162 156 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 FMNL3Q8IVF7 1028 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 BECN2A8MW95 431 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 PLCB2Q00722 1185 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 GIGYF2Q6Y7W6 1299 aaKnown RBP8.79□□□□□ -1
TRRAP-201ENST00000355540 SMARCE1Q969G3 411 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 CCDC144AA2RUR9 1427 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 PAK3O75914 559 aaPredicted RBP8.79□□□□□ -1
TRRAP-201ENST00000355540 EPS15P42566 896 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 STAMBPO95630 424 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 TRDNQ13061 729 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 CGNL1Q0VF96 1302 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 MARCH6O60337 910 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 TXLNAP40222 546 aa8.79□□□□□ -1
TRRAP-201ENST00000355540 AQRO60306 1485 aaKnown RBP eCLIP8.79□□□□□ -11e-6■■■■■ 33.7
TRRAP-201ENST00000355540 SAFB2Q14151 953 aaKnown RBP eCLIP8.78□□□□□ -1
TRRAP-201ENST00000355540 ANKRD18BA2A2Z9 1011 aa8.78□□□□□ -1
TRRAP-201ENST00000355540 SART3Q15020 963 aaKnown RBP8.78□□□□□ -1
TRRAP-201ENST00000355540 ZNHIT6Q9NWK9 470 aaKnown RBP8.78□□□□□ -1
TRRAP-201ENST00000355540 PLCD3Q8N3E9 789 aa8.78□□□□□ -1
TRRAP-201ENST00000355540 FERMT1Q9BQL6 677 aa8.78□□□□□ -1
TRRAP-201ENST00000355540 TAF7LQ5H9L4 462 aa8.78□□□□□ -1
TRRAP-201ENST00000355540 JMYQ8N9B5 988 aa8.78□□□□□ -1
TRRAP-201ENST00000355540 DACH1Q9UI36 760 aa8.78□□□□□ -1
TRRAP-201ENST00000355540 CFAP65Q6ZU64 1925 aaKnown RBP8.78□□□□□ -1
TRRAP-201ENST00000355540 CNKSR2Q8WXI2 1034 aa8.77□□□□□ -1
TRRAP-201ENST00000355540 SYNJ1O43426 1573 aa8.77□□□□□ -1
TRRAP-201ENST00000355540 RRBP1Q9P2E9 1410 aaKnown RBP8.77□□□□□ -1.01
TRRAP-201ENST00000355540 KIF2AO00139 706 aaPredicted RBP8.77□□□□□ -1.01
TRRAP-201ENST00000355540 LRRC45Q96CN5 670 aa8.77□□□□□ -1.01
TRRAP-201ENST00000355540 KIF4AO95239 1232 aa8.77□□□□□ -1.01
TRRAP-201ENST00000355540 SF3A1Q15459 793 aaKnown RBP8.77□□□□□ -1.01
TRRAP-201ENST00000355540 MORC1Q86VD1 984 aa8.77□□□□□ -1.01
TRRAP-201ENST00000355540 TTC12Q9H892 705 aaPredicted RBP8.77□□□□□ -1.01
TRRAP-201ENST00000355540 EFCAB5A4FU69 1503 aa8.77□□□□□ -1.01
TRRAP-201ENST00000355540 CC2D1BQ5T0F9 858 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms