RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 CAGE1Q8TC20 777 aa14□□□□□ -0.17
NUDCD3-202ENST00000355451 PDCL3Q9H2J4 239 aa14□□□□□ -0.17
NUDCD3-202ENST00000355451 SAFBQ15424 915 aaKnown RBP eCLIP14□□□□□ -0.17
NUDCD3-202ENST00000355451 C9orf78Q9NZ63 289 aaPredicted RBP14□□□□□ -0.17
NUDCD3-202ENST00000355451 CBX1P83916 185 aa13.99□□□□□ -0.17
NUDCD3-202ENST00000355451 ENOX2Q16206 610 aaKnown RBP13.99□□□□□ -0.17
NUDCD3-202ENST00000355451 ATP6V1DQ9Y5K8 247 aa13.99□□□□□ -0.17
NUDCD3-202ENST00000355451 ATP2B2Q01814 1243 aa13.98□□□□□ -0.17
NUDCD3-202ENST00000355451 CDK5RAP3Q96JB5 506 aa13.98□□□□□ -0.17
NUDCD3-202ENST00000355451 CHMP4BP1P59074 171 aa13.97□□□□□ -0.17
NUDCD3-202ENST00000355451 LMOD3Q0VAK6 560 aa13.97□□□□□ -0.17
NUDCD3-202ENST00000355451 RSPH4AQ5TD94 716 aa13.97□□□□□ -0.17
NUDCD3-202ENST00000355451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.97□□□□□ -0.173e-6■■□□□ 14.4
NUDCD3-202ENST00000355451 TEFQ10587 303 aa13.97□□□□□ -0.17
NUDCD3-202ENST00000355451 DRC1Q96MC2 740 aa13.97□□□□□ -0.17
NUDCD3-202ENST00000355451 DIAPH3Q9NSV4 1193 aa13.97□□□□□ -0.17
NUDCD3-202ENST00000355451 ACBD3Q9H3P7 528 aa13.96□□□□□ -0.17
NUDCD3-202ENST00000355451 NOM1Q5C9Z4 860 aaKnown RBP13.96□□□□□ -0.17
NUDCD3-202ENST00000355451 H0YHG0 523 aa13.96□□□□□ -0.17
NUDCD3-202ENST00000355451 GOLGA6L3A6NEY3 463 aa13.96□□□□□ -0.17
NUDCD3-202ENST00000355451 KRT18P05783 430 aaKnown RBP13.95□□□□□ -0.18
NUDCD3-202ENST00000355451 TERF2IPQ9NYB0 399 aa13.95□□□□□ -0.18
NUDCD3-202ENST00000355451 CA8P35219 290 aa13.95□□□□□ -0.18
NUDCD3-202ENST00000355451 PMFBP1Q8TBY8 1022 aa13.95□□□□□ -0.18
NUDCD3-202ENST00000355451 XBP1P17861 261 aa13.94□□□□□ -0.18
NUDCD3-202ENST00000355451 GBP2P32456 591 aaPredicted RBP13.94□□□□□ -0.18
NUDCD3-202ENST00000355451 RBM5P52756 815 aaKnown RBP eCLIP13.94□□□□□ -0.18
NUDCD3-202ENST00000355451 HOMER2Q9NSB8 354 aa13.94□□□□□ -0.18
NUDCD3-202ENST00000355451 HSP90B2PQ58FF3 399 aa13.93□□□□□ -0.18
NUDCD3-202ENST00000355451 STK11IPQ8N1F8 1099 aa13.93□□□□□ -0.18
NUDCD3-202ENST00000355451 TTLL5Q6EMB2 1281 aa13.93□□□□□ -0.18
NUDCD3-202ENST00000355451 IPO9Q96P70 1041 aaKnown RBP13.93□□□□□ -0.18
NUDCD3-202ENST00000355451 DNAI2Q9GZS0 605 aa13.93□□□□□ -0.18
NUDCD3-202ENST00000355451 CHMP5Q9NZZ3 219 aa13.93□□□□□ -0.18
NUDCD3-202ENST00000355451 FOSBP53539 338 aa13.93□□□□□ -0.18
NUDCD3-202ENST00000355451 PSMD1Q99460 953 aa13.93□□□□□ -0.18
NUDCD3-202ENST00000355451 ERLIN2O94905 339 aa13.93□□□□□ -0.18
NUDCD3-202ENST00000355451 PLIN1O60240 522 aa13.92□□□□□ -0.18
NUDCD3-202ENST00000355451 BCCIPQ9P287 314 aaKnown RBP eCLIP13.92□□□□□ -0.18
NUDCD3-202ENST00000355451 EIF2S2P20042 333 aaKnown RBP13.92□□□□□ -0.18
NUDCD3-202ENST00000355451 RUFY2Q8WXA3 655 aa13.91□□□□□ -0.18
NUDCD3-202ENST00000355451 CLASRPQ8N2M8 674 aaKnown RBP13.91□□□□□ -0.18
NUDCD3-202ENST00000355451 BICD2Q8TD16 824 aa13.91□□□□□ -0.18
NUDCD3-202ENST00000355451 PSME1Q06323 249 aa13.9□□□□□ -0.18
NUDCD3-202ENST00000355451 DDX23Q9BUQ8 820 aaKnown RBP13.9□□□□□ -0.18
NUDCD3-202ENST00000355451 ANO2Q9NQ90 1003 aa13.9□□□□□ -0.18
NUDCD3-202ENST00000355451 NF2P35240 595 aa13.9□□□□□ -0.18
NUDCD3-202ENST00000355451 ZKSCAN1P17029 563 aaPredicted RBP13.89□□□□□ -0.19
NUDCD3-202ENST00000355451 CLIP1P30622 1438 aa13.89□□□□□ -0.19
NUDCD3-202ENST00000355451 COMMD10Q9Y6G5 202 aa13.89□□□□□ -0.19
NUDCD3-202ENST00000355451 RALYLQ86SE5 291 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-202ENST00000355451 ZCCHC6Q5VYS8 1495 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-202ENST00000355451 SLC3A2P08195 630 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-202ENST00000355451 IFIT2P09913 472 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-202ENST00000355451 ANAPC15P60006 121 aa13.89□□□□□ -0.19
NUDCD3-202ENST00000355451 OLFM4Q6UX06 510 aa13.88□□□□□ -0.19
NUDCD3-202ENST00000355451 PDILTQ8N807 584 aa13.88□□□□□ -0.19
NUDCD3-202ENST00000355451 DDX58O95786 925 aaKnown RBP13.88□□□□□ -0.19
NUDCD3-202ENST00000355451 MIER1Q8N108 512 aa13.88□□□□□ -0.19
NUDCD3-202ENST00000355451 SCLT1Q96NL6 688 aa13.88□□□□□ -0.19
NUDCD3-202ENST00000355451 MAGEC2Q9UBF1 373 aaPredicted RBP13.88□□□□□ -0.19
NUDCD3-202ENST00000355451 NUTM2DQ5VT03 806 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-202ENST00000355451 ZHX3Q9H4I2 956 aa13.87□□□□□ -0.19
NUDCD3-202ENST00000355451 ATF3P18847 181 aa13.87□□□□□ -0.19
NUDCD3-202ENST00000355451 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
NUDCD3-202ENST00000355451 RNF20Q5VTR2 975 aa13.86□□□□□ -0.19
NUDCD3-202ENST00000355451 KTN1Q86UP2 1357 aaKnown RBP13.86□□□□□ -0.19
NUDCD3-202ENST00000355451 KDM4AO75164 1064 aa13.86□□□□□ -0.19
NUDCD3-202ENST00000355451 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
NUDCD3-202ENST00000355451 CCDC112Q8NEF3 446 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 PABPN1LA6NDY0 278 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 MNS1Q8NEH6 495 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 HSP90AB3PQ58FF7 597 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 CCDC181Q5TID7 509 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 EIF3AQ14152 1382 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 TXLNAP40222 546 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 WASHC4Q2M389 1173 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 SASS6Q6UVJ0 657 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 HSP90AA2PQ14568 343 aaPredicted RBP13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 TSPYL1Q9H0U9 437 aa13.85□□□□□ -0.19
NUDCD3-202ENST00000355451 GOLGA6L10A6NI86 522 aa13.84□□□□□ -0.19
NUDCD3-202ENST00000355451 ZMYND15Q9H091 742 aa13.84□□□□□ -0.19
NUDCD3-202ENST00000355451 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
NUDCD3-202ENST00000355451 ARGLU1Q9NWB6 273 aaPredicted RBP13.84□□□□□ -0.19
NUDCD3-202ENST00000355451 STAMBPO95630 424 aa13.84□□□□□ -0.19
NUDCD3-202ENST00000355451 ERC1Q8IUD2 1116 aa13.84□□□□□ -0.19
NUDCD3-202ENST00000355451 G3BP1Q13283 466 aaKnown RBP eCLIP13.83□□□□□ -0.19
NUDCD3-202ENST00000355451 BCL11BQ9C0K0 894 aaPredicted RBP13.83□□□□□ -0.19
NUDCD3-202ENST00000355451 NOP2P46087 812 aaKnown RBP13.83□□□□□ -0.19
NUDCD3-202ENST00000355451 TAX1BP1Q86VP1 789 aa13.83□□□□□ -0.19
NUDCD3-202ENST00000355451 DHX37Q8IY37 1157 aaKnown RBP13.83□□□□□ -0.19
NUDCD3-202ENST00000355451 SSR1P43307 286 aaKnown RBP13.83□□□□□ -0.2
NUDCD3-202ENST00000355451 SART3Q15020 963 aaKnown RBP13.83□□□□□ -0.2
NUDCD3-202ENST00000355451 CLUAP1Q96AJ1 413 aa13.83□□□□□ -0.2
NUDCD3-202ENST00000355451 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.2
NUDCD3-202ENST00000355451 NEUROD6Q96NK8 337 aa13.82□□□□□ -0.2
NUDCD3-202ENST00000355451 MRPS9P82933 396 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms