RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 STK26Q9P289 416 aa15.48■□□□□ 0.07
SYNCRIP-201ENST00000355238 APPP05067 770 aa15.47■□□□□ 0.07
SYNCRIP-201ENST00000355238 PAK3O75914 559 aaPredicted RBP15.47■□□□□ 0.07
SYNCRIP-201ENST00000355238 CDR1P51861 262 aa15.47■□□□□ 0.07
SYNCRIP-201ENST00000355238 ANKRD20A12PQ8NF67 263 aa15.47■□□□□ 0.07
SYNCRIP-201ENST00000355238 CNTLNQ9NXG0 1405 aa15.46■□□□□ 0.07
SYNCRIP-201ENST00000355238 RUFY1Q96T51 708 aa15.46■□□□□ 0.07
SYNCRIP-201ENST00000355238 HOOK1Q9UJC3 728 aaKnown RBP15.46■□□□□ 0.07
SYNCRIP-201ENST00000355238 APAF1O14727 1248 aa15.45■□□□□ 0.06
SYNCRIP-201ENST00000355238 SMC3Q9UQE7 1217 aa15.45■□□□□ 0.06
SYNCRIP-201ENST00000355238 RBM10P98175 930 aaKnown RBP15.44■□□□□ 0.06
SYNCRIP-201ENST00000355238 ROCK1Q13464 1354 aa15.44■□□□□ 0.06
SYNCRIP-201ENST00000355238 ERCC4Q92889 916 aaPredicted RBP15.44■□□□□ 0.06
SYNCRIP-201ENST00000355238 CPLX2Q6PUV4 134 aaKnown RBP15.43■□□□□ 0.06
SYNCRIP-201ENST00000355238 CCDC7Q96M83 1385 aa15.43■□□□□ 0.06
SYNCRIP-201ENST00000355238 API5Q9BZZ5 524 aaKnown RBP15.43■□□□□ 0.06
SYNCRIP-201ENST00000355238 CECR2Q9BXF3 1484 aa15.43■□□□□ 0.06
SYNCRIP-201ENST00000355238 PATL2C9JE40 543 aaKnown RBP15.43■□□□□ 0.06
SYNCRIP-201ENST00000355238 CHMP3Q9Y3E7 222 aa15.43■□□□□ 0.06
SYNCRIP-201ENST00000355238 TSPY26PQ9H489 355 aa15.43■□□□□ 0.06
SYNCRIP-201ENST00000355238 TAF7LQ5H9L4 462 aa15.42■□□□□ 0.06
SYNCRIP-201ENST00000355238 TAF3Q5VWG9 929 aa15.42■□□□□ 0.06
SYNCRIP-201ENST00000355238 CAVIN1Q6NZI2 390 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-201ENST00000355238 BACH2Q9BYV9 841 aa15.42■□□□□ 0.06
SYNCRIP-201ENST00000355238 CCDC73Q6ZRK6 1079 aa15.42■□□□□ 0.06
SYNCRIP-201ENST00000355238 NAT10Q9H0A0 1025 aaKnown RBP15.42■□□□□ 0.06
SYNCRIP-201ENST00000355238 GRPEL1Q9HAV7 217 aa15.41■□□□□ 0.06
SYNCRIP-201ENST00000355238 ANO2Q9NQ90 1003 aa15.41■□□□□ 0.06
SYNCRIP-201ENST00000355238 RNF20Q5VTR2 975 aa15.41■□□□□ 0.06
SYNCRIP-201ENST00000355238 CDC45O75419 566 aa15.41■□□□□ 0.06
SYNCRIP-201ENST00000355238 RDXP35241 583 aaKnown RBP15.41■□□□□ 0.06
SYNCRIP-201ENST00000355238 RNF214Q8ND24 703 aa15.41■□□□□ 0.06
SYNCRIP-201ENST00000355238 CCDC18Q5T9S5 1454 aa15.41■□□□□ 0.06
SYNCRIP-201ENST00000355238 VPS37CA5D8V6 355 aaPredicted RBP15.41■□□□□ 0.06
SYNCRIP-201ENST00000355238 CCP110O43303 1012 aa15.4■□□□□ 0.06
SYNCRIP-201ENST00000355238 ESPNB1AK53 854 aa15.4■□□□□ 0.06
SYNCRIP-201ENST00000355238 H0YHG0 523 aa15.4■□□□□ 0.06
SYNCRIP-201ENST00000355238 LEKR1Q6ZMV7 388 aa15.4■□□□□ 0.06
SYNCRIP-201ENST00000355238 LRRFIP1Q32MZ4 808 aaKnown RBP15.39■□□□□ 0.05
SYNCRIP-201ENST00000355238 BRD4O60885 1362 aaPredicted RBP15.39■□□□□ 0.05
SYNCRIP-201ENST00000355238 PDE4CQ08493 712 aa15.39■□□□□ 0.05
SYNCRIP-201ENST00000355238 TRIM29Q14134 588 aa15.39■□□□□ 0.05
SYNCRIP-201ENST00000355238 RRP12Q5JTH9 1297 aaKnown RBP15.39■□□□□ 0.05
SYNCRIP-201ENST00000355238 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
SYNCRIP-201ENST00000355238 AKAP17AQ02040 695 aaKnown RBP15.39■□□□□ 0.05
SYNCRIP-201ENST00000355238 TOMM22Q9NS69 142 aa15.38■□□□□ 0.05
SYNCRIP-201ENST00000355238 UQCRHLA0A096LP55 91 aa15.38■□□□□ 0.05
SYNCRIP-201ENST00000355238 UQCRHP07919 91 aa15.38■□□□□ 0.05
SYNCRIP-201ENST00000355238 CCDC144AA2RUR9 1427 aa15.38■□□□□ 0.05
SYNCRIP-201ENST00000355238 CCDC47Q96A33 483 aaKnown RBP15.38■□□□□ 0.05
SYNCRIP-201ENST00000355238 SYNE3Q6ZMZ3 975 aa15.37■□□□□ 0.05
SYNCRIP-201ENST00000355238 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
SYNCRIP-201ENST00000355238 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.37■□□□□ 0.05
SYNCRIP-201ENST00000355238 MCM2P49736 904 aa15.37■□□□□ 0.05
SYNCRIP-201ENST00000355238 DCTN1Q14203 1278 aa15.37■□□□□ 0.05
SYNCRIP-201ENST00000355238 DHX8Q14562 1220 aaKnown RBP15.36■□□□□ 0.05
SYNCRIP-201ENST00000355238 CCDC191Q8NCU4 936 aa15.36■□□□□ 0.05
SYNCRIP-201ENST00000355238 PCMTD1Q96MG8 357 aaPredicted RBP15.36■□□□□ 0.05
SYNCRIP-201ENST00000355238 TRIM5Q9C035 493 aa15.36■□□□□ 0.05
SYNCRIP-201ENST00000355238 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
SYNCRIP-201ENST00000355238 KIF7Q2M1P5 1343 aa15.36■□□□□ 0.05
SYNCRIP-201ENST00000355238 RUNDC1Q96C34 613 aa15.35■□□□□ 0.05
SYNCRIP-201ENST00000355238 MARCH6O60337 910 aa15.35■□□□□ 0.05
SYNCRIP-201ENST00000355238 RABEP1Q15276 862 aa15.35■□□□□ 0.05
SYNCRIP-201ENST00000355238 CPLX1O14810 134 aa15.34■□□□□ 0.05
SYNCRIP-201ENST00000355238 CARMIL2Q6F5E8 1435 aa15.34■□□□□ 0.05
SYNCRIP-201ENST00000355238 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
SYNCRIP-201ENST00000355238 GGT6Q6P531 493 aa15.34■□□□□ 0.05
SYNCRIP-201ENST00000355238 PRPF40AO75400 957 aaKnown RBP15.34■□□□□ 0.05
SYNCRIP-201ENST00000355238 CWC22Q9HCG8 908 aaKnown RBP15.34■□□□□ 0.05
SYNCRIP-201ENST00000355238 UACAQ9BZF9 1416 aa15.33■□□□□ 0.05
SYNCRIP-201ENST00000355238 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
SYNCRIP-201ENST00000355238 CCDC112Q8NEF3 446 aa15.32■□□□□ 0.04
SYNCRIP-201ENST00000355238 PANK1Q8TE04 598 aa15.32■□□□□ 0.04
SYNCRIP-201ENST00000355238 EFCAB2Q5VUJ9 269 aa15.32■□□□□ 0.04
SYNCRIP-201ENST00000355238 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
SYNCRIP-201ENST00000355238 CIZ1Q9ULV3 898 aaPredicted RBP15.32■□□□□ 0.04
SYNCRIP-201ENST00000355238 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
SYNCRIP-201ENST00000355238 PDCL2Q8N4E4 241 aa15.31■□□□□ 0.04
SYNCRIP-201ENST00000355238 ZSCAN30Q86W11 494 aa15.31■□□□□ 0.04
SYNCRIP-201ENST00000355238 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
SYNCRIP-201ENST00000355238 MCM4P33991 863 aa15.3■□□□□ 0.04
SYNCRIP-201ENST00000355238 ZNF330Q9Y3S2 320 aaPredicted RBP15.3■□□□□ 0.04
SYNCRIP-201ENST00000355238 UBE2Q2Q8WVN8 375 aa15.3■□□□□ 0.04
SYNCRIP-201ENST00000355238 HSP90AB4PQ58FF6 505 aa15.3■□□□□ 0.04
SYNCRIP-201ENST00000355238 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
SYNCRIP-201ENST00000355238 PDE3AQ14432 1141 aa15.3■□□□□ 0.04
SYNCRIP-201ENST00000355238 ERC2O15083 957 aa15.29■□□□□ 0.04
SYNCRIP-201ENST00000355238 AMPHP49418 695 aa15.29■□□□□ 0.04
SYNCRIP-201ENST00000355238 SDF4Q9BRK5 362 aa15.29■□□□□ 0.04
SYNCRIP-201ENST00000355238 SMG6Q86US8 1419 aaKnown RBP15.29■□□□□ 0.04
SYNCRIP-201ENST00000355238 USP8P40818 1118 aa15.28■□□□□ 0.04
SYNCRIP-201ENST00000355238 PDZRN3Q9UPQ7 1066 aa15.28■□□□□ 0.04
SYNCRIP-201ENST00000355238 RIPK4P57078 832 aa15.28■□□□□ 0.04
SYNCRIP-201ENST00000355238 PDCP20941 246 aa15.28■□□□□ 0.04
SYNCRIP-201ENST00000355238 PDCL3Q9H2J4 239 aa15.28■□□□□ 0.04
SYNCRIP-201ENST00000355238 FBXW7Q969H0 707 aa15.28■□□□□ 0.04
SYNCRIP-201ENST00000355238 MIA2Q96PC5 1412 aa15.28■□□□□ 0.04
SYNCRIP-201ENST00000355238 NINLQ9Y2I6 1382 aa15.27■□□□□ 0.04
SYNCRIP-201ENST00000355238 WASHC2AQ641Q2 1341 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms