RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 PMFBP1Q8TBY8 1022 aa24.63■■□□□ 1.53
RNF38-202ENST00000350199 PBRM1Q86U86 1689 aa24.63■■□□□ 1.53
RNF38-202ENST00000350199 PPP2R1AP30153 589 aa24.63■■□□□ 1.53
RNF38-202ENST00000350199 NGEFQ8N5V2 710 aa24.63■■□□□ 1.53
RNF38-202ENST00000350199 FANCAO15360 1455 aa24.63■■□□□ 1.53
RNF38-202ENST00000350199 TCOF1Q13428 1488 aaKnown RBP24.63■■□□□ 1.53
RNF38-202ENST00000350199 BCL2L13Q9BXK5 485 aa24.62■■□□□ 1.53
RNF38-202ENST00000350199 CCDC184Q52MB2 194 aa24.61■■□□□ 1.53
RNF38-202ENST00000350199 DISP1Q96F81 1524 aa24.6■■□□□ 1.53
RNF38-202ENST00000350199 RPGRIP1LQ68CZ1 1315 aa24.6■■□□□ 1.53
RNF38-202ENST00000350199 PRAM1Q96QH2 718 aa24.6■■□□□ 1.53
RNF38-202ENST00000350199 RUNDC1Q96C34 613 aa24.6■■□□□ 1.53
RNF38-202ENST00000350199 NUP160Q12769 1436 aa24.59■■□□□ 1.53
RNF38-202ENST00000350199 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
RNF38-202ENST00000350199 SLC12A5Q9H2X9 1139 aa24.59■■□□□ 1.53
RNF38-202ENST00000350199 STK31Q9BXU1 1019 aa24.58■■□□□ 1.53
RNF38-202ENST00000350199 CRBNQ96SW2 442 aa24.58■■□□□ 1.52
RNF38-202ENST00000350199 APBB1O00213 710 aa24.56■■□□□ 1.52
RNF38-202ENST00000350199 PLCH2O75038 1416 aa24.56■■□□□ 1.52
RNF38-202ENST00000350199 MTHFSP49914 203 aa24.56■■□□□ 1.52
RNF38-202ENST00000350199 PNISRQ8TF01 805 aaKnown RBP24.56■■□□□ 1.52
RNF38-202ENST00000350199 ELL2O00472 640 aaPredicted RBP24.54■■□□□ 1.52
RNF38-202ENST00000350199 RIPK4P57078 832 aa24.53■■□□□ 1.52
RNF38-202ENST00000350199 SAMD9Q5K651 1589 aa24.52■■□□□ 1.52
RNF38-202ENST00000350199 TXNDC2Q86VQ3 553 aa24.52■■□□□ 1.52
RNF38-202ENST00000350199 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
RNF38-202ENST00000350199 GOLGA6L22H0YM25 854 aa24.5■■□□□ 1.51
RNF38-202ENST00000350199 SYCP2Q9BX26 1530 aa24.5■■□□□ 1.51
RNF38-202ENST00000350199 ZKSCAN2Q63HK3 967 aa24.5■■□□□ 1.51
RNF38-202ENST00000350199 COG6Q9Y2V7 657 aa24.49■■□□□ 1.51
RNF38-202ENST00000350199 CDCA7LQ96GN5 454 aa24.49■■□□□ 1.51
RNF38-202ENST00000350199 CHMP4AQ9BY43 222 aa24.49■■□□□ 1.51
RNF38-202ENST00000350199 DHX29Q7Z478 1369 aaKnown RBP24.49■■□□□ 1.51
RNF38-202ENST00000350199 CENPQQ7L2Z9 268 aaPredicted RBP24.49■■□□□ 1.51
RNF38-202ENST00000350199 SLC4A10Q6U841 1118 aa24.47■■□□□ 1.51
RNF38-202ENST00000350199 HSP90AB1P08238 724 aaKnown RBP24.47■■□□□ 1.51
RNF38-202ENST00000350199 ASXL2Q76L83 1435 aa24.47■■□□□ 1.51
RNF38-202ENST00000350199 CDK19Q9BWU1 502 aa24.45■■□□□ 1.51
RNF38-202ENST00000350199 HMOX1P09601 288 aa24.45■■□□□ 1.5
RNF38-202ENST00000350199 DENND4BO75064 1496 aaPredicted RBP24.44■■□□□ 1.5
RNF38-202ENST00000350199 ADGRF5Q8IZF2 1346 aa24.44■■□□□ 1.5
RNF38-202ENST00000350199 HSCBQ8IWL3 235 aa24.44■■□□□ 1.5
RNF38-202ENST00000350199 TCP11L2Q8N4U5 519 aa24.44■■□□□ 1.5
RNF38-202ENST00000350199 CABP1Q9NZU7 370 aa24.43■■□□□ 1.5
RNF38-202ENST00000350199 PSME1Q06323 249 aa24.42■■□□□ 1.5
RNF38-202ENST00000350199 CFAP44Q96MT7 982 aa24.42■■□□□ 1.5
RNF38-202ENST00000350199 WDR7Q9Y4E6 1490 aa24.41■■□□□ 1.5
RNF38-202ENST00000350199 DUOX2Q9NRD8 1548 aa24.41■■□□□ 1.5
RNF38-202ENST00000350199 FAM135AQ9P2D6 1515 aa24.4■■□□□ 1.5
RNF38-202ENST00000350199 NCLP19338 710 aaKnown RBP24.4■■□□□ 1.5
RNF38-202ENST00000350199 TRAPPC8Q9Y2L5 1435 aa24.39■■□□□ 1.49
RNF38-202ENST00000350199 HMMRO75330 724 aa24.39■■□□□ 1.49
RNF38-202ENST00000350199 CEP170Q5SW79 1584 aa24.38■■□□□ 1.49
RNF38-202ENST00000350199 KCNJ4P48050 445 aa24.38■■□□□ 1.49
RNF38-202ENST00000350199 THEMISQ8N1K5 641 aaPredicted RBP24.38■■□□□ 1.49
RNF38-202ENST00000350199 KDM5BQ9UGL1 1544 aa24.37■■□□□ 1.49
RNF38-202ENST00000350199 IDI1Q13907 227 aa24.37■■□□□ 1.49
RNF38-202ENST00000350199 SPRYD3Q8NCJ5 442 aa24.36■■□□□ 1.49
RNF38-202ENST00000350199 SHANK2Q9UPX8 1470 aa24.35■■□□□ 1.49
RNF38-202ENST00000350199 FBXO31Q5XUX0 539 aaPredicted RBP24.35■■□□□ 1.49
RNF38-202ENST00000350199 DZIP1LQ8IYY4 767 aaKnown RBP24.35■■□□□ 1.49
RNF38-202ENST00000350199 ABCC2Q92887 1545 aa24.35■■□□□ 1.49
RNF38-202ENST00000350199 IPO9Q96P70 1041 aaKnown RBP24.35■■□□□ 1.49
RNF38-202ENST00000350199 PDE4AP27815 886 aa24.34■■□□□ 1.49
RNF38-202ENST00000350199 DNMT1P26358 1616 aaKnown RBP24.34■■□□□ 1.49
RNF38-202ENST00000350199 RTEL1-TNFRSF6BF6WH68 1400 aa24.34■■□□□ 1.49
RNF38-202ENST00000350199 ATAD2Q6PL18 1390 aa24.34■■□□□ 1.49
RNF38-202ENST00000350199 MFAP1P55081 439 aaKnown RBP24.34■■□□□ 1.49
RNF38-202ENST00000350199 SLC26A8Q96RN1 970 aa24.33■■□□□ 1.49
RNF38-202ENST00000350199 NLRP6P59044 892 aa24.33■■□□□ 1.49
RNF38-202ENST00000350199 NUTM2GQ5VZR2 741 aa24.33■■□□□ 1.49
RNF38-202ENST00000350199 ZNF330Q9Y3S2 320 aaPredicted RBP24.33■■□□□ 1.49
RNF38-202ENST00000350199 GNAI1P63096 354 aa24.33■■□□□ 1.49
RNF38-202ENST00000350199 MCCP23508 829 aa24.33■■□□□ 1.48
RNF38-202ENST00000350199 DDX19BQ9UMR2 479 aa24.32■■□□□ 1.48
RNF38-202ENST00000350199 MAGI3Q5TCQ9 1506 aa24.32■■□□□ 1.48
RNF38-202ENST00000350199 C1orf141Q5JVX7 400 aa24.32■■□□□ 1.48
RNF38-202ENST00000350199 NSD3Q9BZ95 1437 aa24.32■■□□□ 1.48
RNF38-202ENST00000350199 NOS1P29475 1434 aa24.32■■□□□ 1.48
RNF38-202ENST00000350199 POGZQ7Z3K3 1410 aa24.31■■□□□ 1.48
RNF38-202ENST00000350199 TEFQ10587 303 aa24.31■■□□□ 1.48
RNF38-202ENST00000350199 SCAF11Q99590 1463 aaKnown RBP24.31■■□□□ 1.48
RNF38-202ENST00000350199 PRKAR2BP31323 418 aa24.29■■□□□ 1.48
RNF38-202ENST00000350199 NPHP1O15259 732 aa24.29■■□□□ 1.48
RNF38-202ENST00000350199 FAM161AQ3B820 660 aa24.28■■□□□ 1.48
RNF38-202ENST00000350199 SMG6Q86US8 1419 aaKnown RBP24.28■■□□□ 1.48
RNF38-202ENST00000350199 RALGAPBQ86X10 1494 aa24.28■■□□□ 1.48
RNF38-202ENST00000350199 PANK1Q8TE04 598 aa24.28■■□□□ 1.48
RNF38-202ENST00000350199 ZNF692Q9BU19 519 aaPredicted RBP24.27■■□□□ 1.48
RNF38-202ENST00000350199 HDAC5Q9UQL6 1122 aa24.27■■□□□ 1.48
RNF38-202ENST00000350199 DISP3Q9P2K9 1392 aa24.27■■□□□ 1.48
RNF38-202ENST00000350199 ZNF518AQ6AHZ1 1483 aa24.27■■□□□ 1.48
RNF38-202ENST00000350199 KIF16BQ96L93 1317 aa24.27■■□□□ 1.48
RNF38-202ENST00000350199 A2MP01023 1474 aa24.26■■□□□ 1.47
RNF38-202ENST00000350199 API5Q9BZZ5 524 aaKnown RBP24.26■■□□□ 1.47
RNF38-202ENST00000350199 FGD1P98174 961 aa24.25■■□□□ 1.47
RNF38-202ENST00000350199 ANKRD45Q5TZF3 282 aa24.25■■□□□ 1.47
RNF38-202ENST00000350199 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
RNF38-202ENST00000350199 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
RNF38-202ENST00000350199 PZPP20742 1482 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms