RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 COL16A1Q07092 1604 aaPredicted RBP24.85■■□□□ 1.57
COPE-202ENST00000349893 CHD2O14647 1828 aaKnown RBP24.84■■□□□ 1.57
COPE-202ENST00000349893 ZFYVE9O95405 1425 aa24.84■■□□□ 1.57
COPE-202ENST00000349893 ANKRD30AQ9BXX3 1397 aa24.82■■□□□ 1.56
COPE-202ENST00000349893 NCOA3Q9Y6Q9 1424 aa24.82■■□□□ 1.56
COPE-202ENST00000349893 RPRD2Q5VT52 1461 aaKnown RBP24.82■■□□□ 1.56
COPE-202ENST00000349893 PLEKHG1Q9ULL1 1385 aa24.81■■□□□ 1.56
COPE-202ENST00000349893 FGD6Q6ZV73 1430 aa24.8■■□□□ 1.56
COPE-202ENST00000349893 LRP6O75581 1613 aa24.78■■□□□ 1.56
COPE-202ENST00000349893 SPATA31A6Q5VVP1 1343 aa24.77■■□□□ 1.56
COPE-202ENST00000349893 ADGRL2O95490 1459 aa24.77■■□□□ 1.56
COPE-202ENST00000349893 AHDC1Q5TGY3 1603 aaPredicted RBP24.75■■□□□ 1.55
COPE-202ENST00000349893 MYO5BQ9ULV0 1848 aa24.75■■□□□ 1.55
COPE-202ENST00000349893 TMEM131LA2VDJ0 1609 aa24.74■■□□□ 1.55
COPE-202ENST00000349893 RIMS2Q9UQ26 1411 aa24.73■■□□□ 1.55
COPE-202ENST00000349893 SHPRHQ149N8 1683 aa24.72■■□□□ 1.55
COPE-202ENST00000349893 GCC2Q8IWJ2 1684 aa24.72■■□□□ 1.55
COPE-202ENST00000349893 TBX22Q9Y458 520 aa24.72■■□□□ 1.55
COPE-202ENST00000349893 CHIC2Q9UKJ5 165 aa24.71■■□□□ 1.55
COPE-202ENST00000349893 ZNF772Q68DY9 489 aaPredicted RBP24.7■■□□□ 1.54
COPE-202ENST00000349893 UPF1Q92900 1129 aaKnown RBP eCLIP24.7■■□□□ 1.54
COPE-202ENST00000349893 BCANQ96GW7 911 aa24.7■■□□□ 1.54
COPE-202ENST00000349893 HDGFP51858 240 aaKnown RBP24.69■■□□□ 1.54
COPE-202ENST00000349893 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.69■■□□□ 1.54
COPE-202ENST00000349893 ADAMTS13Q76LX8 1427 aa24.69■■□□□ 1.54
COPE-202ENST00000349893 DIP2AQ14689 1571 aa24.68■■□□□ 1.54
COPE-202ENST00000349893 PIK3R4Q99570 1358 aa24.67■■□□□ 1.54
COPE-202ENST00000349893 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
COPE-202ENST00000349893 CADPS2Q86UW7 1296 aa24.65■■□□□ 1.54
COPE-202ENST00000349893 ANKRD50Q9ULJ7 1429 aa24.65■■□□□ 1.54
COPE-202ENST00000349893 CDK12Q9NYV4 1490 aaPredicted RBP24.64■■□□□ 1.54
COPE-202ENST00000349893 PPP1R15AO75807 674 aaPredicted RBP24.64■■□□□ 1.54
COPE-202ENST00000349893 C19orf44Q9H6X5 657 aa24.64■■□□□ 1.54
COPE-202ENST00000349893 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.63■■□□□ 1.53
COPE-202ENST00000349893 MEX3CQ5U5Q3 659 aaKnown RBP24.61■■□□□ 1.53
COPE-202ENST00000349893 UNC13BO14795 1591 aa24.6■■□□□ 1.53
COPE-202ENST00000349893 DCCP43146 1447 aa24.59■■□□□ 1.53
COPE-202ENST00000349893 ATF3P18847 181 aa24.58■■□□□ 1.53
COPE-202ENST00000349893 APLP2Q06481 763 aa24.58■■□□□ 1.53
COPE-202ENST00000349893 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
COPE-202ENST00000349893 TRPM2O94759 1503 aa24.57■■□□□ 1.52
COPE-202ENST00000349893 C14orf37Q86TY3 774 aa24.57■■□□□ 1.52
COPE-202ENST00000349893 E9PCH4 1651 aa24.56■■□□□ 1.52
COPE-202ENST00000349893 SRCAPQ6ZRS2 3230 aa24.56■■□□□ 1.52
COPE-202ENST00000349893 RXRBP28702 533 aa24.56■■□□□ 1.52
COPE-202ENST00000349893 BRINP3Q76B58 766 aa24.56■■□□□ 1.52
COPE-202ENST00000349893 PTPRUQ92729 1446 aa24.54■■□□□ 1.52
COPE-202ENST00000349893 SETD5Q9C0A6 1442 aa24.54■■□□□ 1.52
COPE-202ENST00000349893 ASXL1Q8IXJ9 1541 aa24.53■■□□□ 1.52
COPE-202ENST00000349893 NHSL1Q5SYE7 1610 aa24.52■■□□□ 1.52
COPE-202ENST00000349893 XRN1Q8IZH2 1706 aaKnown RBP24.52■■□□□ 1.52
COPE-202ENST00000349893 AMOTL2Q9Y2J4 779 aa24.5■■□□□ 1.51
COPE-202ENST00000349893 IQGAP3Q86VI3 1631 aa24.5■■□□□ 1.51
COPE-202ENST00000349893 AFF2P51816 1311 aa24.48■■□□□ 1.51
COPE-202ENST00000349893 MST1RQ04912 1400 aa24.48■■□□□ 1.51
COPE-202ENST00000349893 NUTM2DQ5VT03 806 aaPredicted RBP24.48■■□□□ 1.51
COPE-202ENST00000349893 NRXN3Q9Y4C0 1643 aa24.48■■□□□ 1.51
COPE-202ENST00000349893 SETBP1Q9Y6X0 1596 aa24.47■■□□□ 1.51
COPE-202ENST00000349893 CHGAP10645 457 aaKnown RBP24.47■■□□□ 1.51
COPE-202ENST00000349893 NUTM2BA6NNL0 878 aaPredicted RBP24.44■■□□□ 1.5
COPE-202ENST00000349893 NUTM2EB1AL46 878 aaPredicted RBP24.44■■□□□ 1.5
COPE-202ENST00000349893 FAM50AQ14320 339 aaKnown RBP24.44■■□□□ 1.5
COPE-202ENST00000349893 NUTM2AQ8IVF1 878 aaPredicted RBP24.44■■□□□ 1.5
COPE-202ENST00000349893 RGS12O14924 1447 aa24.44■■□□□ 1.5
COPE-202ENST00000349893 ROCK1Q13464 1354 aa24.42■■□□□ 1.5
COPE-202ENST00000349893 LRRC59Q96AG4 307 aaKnown RBP24.42■■□□□ 1.5
COPE-202ENST00000349893 PNPLA6Q8IY17 1366 aa24.4■■□□□ 1.5
COPE-202ENST00000349893 RBM6P78332 1123 aaKnown RBP24.39■■□□□ 1.49
COPE-202ENST00000349893 ADGRL3Q9HAR2 1447 aa24.38■■□□□ 1.49
COPE-202ENST00000349893 LAMC1P11047 1609 aa24.38■■□□□ 1.49
COPE-202ENST00000349893 QTRT2Q9H974 415 aaKnown RBP24.36■■□□□ 1.49
COPE-202ENST00000349893 METP08581 1390 aa24.36■■□□□ 1.49
COPE-202ENST00000349893 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
COPE-202ENST00000349893 C8orf37Q96NL8 207 aa24.34■■□□□ 1.49
COPE-202ENST00000349893 NUP155O75694 1391 aa24.32■■□□□ 1.48
COPE-202ENST00000349893 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
COPE-202ENST00000349893 EP400Q96L91 3159 aa24.31■■□□□ 1.48
COPE-202ENST00000349893 DDX17Q92841 729 aaKnown RBP24.3■■□□□ 1.48
COPE-202ENST00000349893 C1orf167Q5SNV9 1468 aa24.28■■□□□ 1.48
COPE-202ENST00000349893 NEXMIFQ5QGS0 1516 aa24.27■■□□□ 1.48
COPE-202ENST00000349893 NGLY1Q96IV0 654 aa24.27■■□□□ 1.48
COPE-202ENST00000349893 ATAD2Q6PL18 1390 aa24.27■■□□□ 1.48
COPE-202ENST00000349893 SOS2Q07890 1332 aaPredicted RBP24.26■■□□□ 1.47
COPE-202ENST00000349893 PTCH1Q13635 1447 aa24.24■■□□□ 1.47
COPE-202ENST00000349893 PRAG1Q86YV5 1406 aa24.24■■□□□ 1.47
COPE-202ENST00000349893 COL22A1Q8NFW1 1626 aaPredicted RBP24.22■■□□□ 1.47
COPE-202ENST00000349893 FNBP4Q8N3X1 1017 aaPredicted RBP24.22■■□□□ 1.47
COPE-202ENST00000349893 ADAMTS2O95450 1211 aa24.21■■□□□ 1.47
COPE-202ENST00000349893 ZNF326Q5BKZ1 582 aaKnown RBP24.21■■□□□ 1.47
COPE-202ENST00000349893 ATRNO75882 1429 aa24.2■■□□□ 1.46
COPE-202ENST00000349893 CLTCL1P53675 1640 aa24.2■■□□□ 1.46
COPE-202ENST00000349893 TRPC5Q9UL62 973 aaPredicted RBP24.19■■□□□ 1.46
COPE-202ENST00000349893 USP21Q9UK80 565 aa24.18■■□□□ 1.46
COPE-202ENST00000349893 ROBO2Q9HCK4 1378 aa24.16■■□□□ 1.46
COPE-202ENST00000349893 MYOM2P54296 1465 aa24.15■■□□□ 1.46
COPE-202ENST00000349893 ORAI2Q96SN7 254 aa24.15■■□□□ 1.46
COPE-202ENST00000349893 KIF1BO60333 1816 aa24.13■■□□□ 1.45
COPE-202ENST00000349893 FOXD1Q16676 465 aa24.13■■□□□ 1.45
COPE-202ENST00000349893 CCDC125Q86Z20 511 aa24.11■■□□□ 1.45
COPE-202ENST00000349893 ZRANB1Q9UGI0 708 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms