RNA–Protein interactions for RNA: ENST00000345535.8

SLX1A-202, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLX1A, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-202ENST00000345535 FAM50AQ14320 339 aaKnown RBP27.72■■■□□ 2.03
SLX1A-202ENST00000345535 MSH6P52701 1360 aa27.7■■■□□ 2.02
SLX1A-202ENST00000345535 PPP1R15AO75807 674 aaPredicted RBP27.68■■■□□ 2.02
SLX1A-202ENST00000345535 NWD1Q149M9 1564 aa27.67■■■□□ 2.02
SLX1A-202ENST00000345535 PLEKHG1Q9ULL1 1385 aa27.65■■■□□ 2.02
SLX1A-202ENST00000345535 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.64■■■□□ 2.02
SLX1A-202ENST00000345535 ROBO1Q9Y6N7 1651 aa27.62■■■□□ 2.01
SLX1A-202ENST00000345535 ZFYVE9O95405 1425 aa27.61■■■□□ 2.01
SLX1A-202ENST00000345535 RIMS2Q9UQ26 1411 aa27.61■■■□□ 2.01
SLX1A-202ENST00000345535 RGS17Q9UGC6 210 aaPredicted RBP27.6■■■□□ 2.01
SLX1A-202ENST00000345535 SLAIN2Q9P270 581 aa27.59■■■□□ 2.01
SLX1A-202ENST00000345535 GCC2Q8IWJ2 1684 aa27.59■■■□□ 2.01
SLX1A-202ENST00000345535 NCOA3Q9Y6Q9 1424 aa27.58■■■□□ 2.01
SLX1A-202ENST00000345535 TBX22Q9Y458 520 aa27.58■■■□□ 2.01
SLX1A-202ENST00000345535 RBM33Q96EV2 1170 aaKnown RBP27.57■■■□□ 2
SLX1A-202ENST00000345535 TMEM131LA2VDJ0 1609 aa27.55■■■□□ 2
SLX1A-202ENST00000345535 CHD2O14647 1828 aaKnown RBP27.55■■■□□ 2
SLX1A-202ENST00000345535 UNC13BO14795 1591 aa27.54■■■□□ 2
SLX1A-202ENST00000345535 CHGAP10645 457 aaKnown RBP27.54■■■□□ 2
SLX1A-202ENST00000345535 ROCK1Q13464 1354 aa27.54■■■□□ 2
SLX1A-202ENST00000345535 PIK3R4Q99570 1358 aa27.52■■■□□ 2
SLX1A-202ENST00000345535 JCADQ9P266 1359 aa27.52■■■□□ 2
SLX1A-202ENST00000345535 C14orf37Q86TY3 774 aa27.52■■■□□ 2
SLX1A-202ENST00000345535 MYO5BQ9ULV0 1848 aa27.52■■■□□ 2
SLX1A-202ENST00000345535 DIP2AQ14689 1571 aa27.51■■□□□ 1.99
SLX1A-202ENST00000345535 CADPS2Q86UW7 1296 aa27.49■■□□□ 1.99
SLX1A-202ENST00000345535 PHLPP1O60346 1717 aa27.49■■□□□ 1.99
SLX1A-202ENST00000345535 POTEAQ6S8J7 498 aa27.46■■□□□ 1.99
SLX1A-202ENST00000345535 IQGAP3Q86VI3 1631 aa27.45■■□□□ 1.99
SLX1A-202ENST00000345535 ATF3P18847 181 aa27.45■■□□□ 1.98
SLX1A-202ENST00000345535 C19orf44Q9H6X5 657 aa27.45■■□□□ 1.98
SLX1A-202ENST00000345535 E9PCH4 1651 aa27.44■■□□□ 1.98
SLX1A-202ENST00000345535 NUP155O75694 1391 aa27.43■■□□□ 1.98
SLX1A-202ENST00000345535 SPATA31A6Q5VVP1 1343 aa27.41■■□□□ 1.98
SLX1A-202ENST00000345535 ADAMTS13Q76LX8 1427 aa27.41■■□□□ 1.98
SLX1A-202ENST00000345535 TRPM2O94759 1503 aa27.41■■□□□ 1.98
SLX1A-202ENST00000345535 COL16A1Q07092 1604 aaPredicted RBP27.37■■□□□ 1.97
SLX1A-202ENST00000345535 NUTM2DQ5VT03 806 aaPredicted RBP27.36■■□□□ 1.97
SLX1A-202ENST00000345535 MEX3CQ5U5Q3 659 aaKnown RBP27.35■■□□□ 1.97
SLX1A-202ENST00000345535 AMOTL2Q9Y2J4 779 aa27.35■■□□□ 1.97
SLX1A-202ENST00000345535 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.34■■□□□ 1.97
SLX1A-202ENST00000345535 DCCP43146 1447 aa27.33■■□□□ 1.97
SLX1A-202ENST00000345535 ZNF772Q68DY9 489 aaPredicted RBP27.33■■□□□ 1.97
SLX1A-202ENST00000345535 AHDC1Q5TGY3 1603 aaPredicted RBP27.33■■□□□ 1.97
SLX1A-202ENST00000345535 ITGAEP38570 1179 aa27.3■■□□□ 1.96
SLX1A-202ENST00000345535 ZNF326Q5BKZ1 582 aaKnown RBP27.28■■□□□ 1.96
SLX1A-202ENST00000345535 SHPRHQ149N8 1683 aa27.27■■□□□ 1.96
SLX1A-202ENST00000345535 SETBP1Q9Y6X0 1596 aa27.26■■□□□ 1.95
SLX1A-202ENST00000345535 BRINP3Q76B58 766 aa27.25■■□□□ 1.95
SLX1A-202ENST00000345535 SPHKAPQ2M3C7 1700 aa27.24■■□□□ 1.95
SLX1A-202ENST00000345535 PTPRUQ92729 1446 aa27.24■■□□□ 1.95
SLX1A-202ENST00000345535 LRP6O75581 1613 aa27.22■■□□□ 1.95
SLX1A-202ENST00000345535 XRN1Q8IZH2 1706 aaKnown RBP27.2■■□□□ 1.94
SLX1A-202ENST00000345535 ASXL1Q8IXJ9 1541 aa27.17■■□□□ 1.94
SLX1A-202ENST00000345535 NRXN3Q9Y4C0 1643 aa27.17■■□□□ 1.94
SLX1A-202ENST00000345535 LRRC59Q96AG4 307 aaKnown RBP27.17■■□□□ 1.94
SLX1A-202ENST00000345535 SETD5Q9C0A6 1442 aa27.16■■□□□ 1.94
SLX1A-202ENST00000345535 RXRBP28702 533 aa27.16■■□□□ 1.94
SLX1A-202ENST00000345535 SETD1AO15047 1707 aaKnown RBP27.16■■□□□ 1.94
SLX1A-202ENST00000345535 MST1RQ04912 1400 aa27.15■■□□□ 1.94
SLX1A-202ENST00000345535 ADGRL3Q9HAR2 1447 aa27.14■■□□□ 1.93
SLX1A-202ENST00000345535 METP08581 1390 aa27.13■■□□□ 1.93
SLX1A-202ENST00000345535 NUTM2BA6NNL0 878 aaPredicted RBP27.13■■□□□ 1.93
SLX1A-202ENST00000345535 NUTM2EB1AL46 878 aaPredicted RBP27.13■■□□□ 1.93
SLX1A-202ENST00000345535 NUTM2AQ8IVF1 878 aaPredicted RBP27.13■■□□□ 1.93
SLX1A-202ENST00000345535 TRIM52Q96A61 297 aa27.12■■□□□ 1.93
SLX1A-202ENST00000345535 CDK12Q9NYV4 1490 aaPredicted RBP27.1■■□□□ 1.93
SLX1A-202ENST00000345535 NHSL1Q5SYE7 1610 aa27.09■■□□□ 1.93
SLX1A-202ENST00000345535 VGFO15240 615 aaPredicted RBP27.09■■□□□ 1.93
SLX1A-202ENST00000345535 NEXMIFQ5QGS0 1516 aa27.09■■□□□ 1.93
SLX1A-202ENST00000345535 KIF1BO60333 1816 aa27.09■■□□□ 1.93
SLX1A-202ENST00000345535 CLTCL1P53675 1640 aa27.07■■□□□ 1.92
SLX1A-202ENST00000345535 UPF1Q92900 1129 aaKnown RBP eCLIP27.06■■□□□ 1.92
SLX1A-202ENST00000345535 AFF2P51816 1311 aa27.06■■□□□ 1.92
SLX1A-202ENST00000345535 PPARGC1BQ86YN6 1023 aaKnown RBP27.05■■□□□ 1.92
SLX1A-202ENST00000345535 RPGRIP1LQ68CZ1 1315 aa27.04■■□□□ 1.92
SLX1A-202ENST00000345535 PTCH1Q13635 1447 aa27.04■■□□□ 1.92
SLX1A-202ENST00000345535 RRBP1Q9P2E9 1410 aaKnown RBP27.03■■□□□ 1.92
SLX1A-202ENST00000345535 NAIPQ13075 1403 aa27.02■■□□□ 1.92
SLX1A-202ENST00000345535 PNPLA6Q8IY17 1366 aa27.01■■□□□ 1.91
SLX1A-202ENST00000345535 NALCNQ8IZF0 1738 aa27■■□□□ 1.91
SLX1A-202ENST00000345535 C8orf37Q96NL8 207 aa27■■□□□ 1.91
SLX1A-202ENST00000345535 C1orf167Q5SNV9 1468 aa27■■□□□ 1.91
SLX1A-202ENST00000345535 RBM6P78332 1123 aaKnown RBP26.98■■□□□ 1.91
SLX1A-202ENST00000345535 PRAG1Q86YV5 1406 aa26.98■■□□□ 1.91
SLX1A-202ENST00000345535 QTRT2Q9H974 415 aaKnown RBP26.96■■□□□ 1.91
SLX1A-202ENST00000345535 NGLY1Q96IV0 654 aa26.95■■□□□ 1.9
SLX1A-202ENST00000345535 SLC4A1APQ9BWU0 796 aaKnown RBP26.95■■□□□ 1.9
SLX1A-202ENST00000345535 HFM1A2PYH4 1435 aa26.95■■□□□ 1.9
SLX1A-202ENST00000345535 DDX17Q92841 729 aaKnown RBP26.93■■□□□ 1.9
SLX1A-202ENST00000345535 LAMC1P11047 1609 aa26.93■■□□□ 1.9
SLX1A-202ENST00000345535 ROBO2Q9HCK4 1378 aa26.92■■□□□ 1.9
SLX1A-202ENST00000345535 SOS2Q07890 1332 aaPredicted RBP26.91■■□□□ 1.9
SLX1A-202ENST00000345535 ADAMTS2O95450 1211 aa26.89■■□□□ 1.9
SLX1A-202ENST00000345535 ORAI2Q96SN7 254 aa26.87■■□□□ 1.89
SLX1A-202ENST00000345535 RGS12O14924 1447 aa26.86■■□□□ 1.89
SLX1A-202ENST00000345535 NPHP3Q7Z494 1330 aa26.86■■□□□ 1.89
SLX1A-202ENST00000345535 PPLO60437 1756 aa26.84■■□□□ 1.89
SLX1A-202ENST00000345535 TRPC5Q9UL62 973 aaPredicted RBP26.84■■□□□ 1.89
SLX1A-202ENST00000345535 USP21Q9UK80 565 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms