RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 DAPK1P53355 1430 aa20.82■□□□□ 0.92
SMARCA4-201ENST00000344626 ELL2O00472 640 aaPredicted RBP20.82■□□□□ 0.92
SMARCA4-201ENST00000344626 ISY1Q9ULR0 285 aaKnown RBP20.82■□□□□ 0.92
SMARCA4-201ENST00000344626 SLC4A10Q6U841 1118 aa20.81■□□□□ 0.92
SMARCA4-201ENST00000344626 KIF14Q15058 1648 aa20.81■□□□□ 0.92
SMARCA4-201ENST00000344626 TOM1L2Q6ZVM7 507 aa20.8■□□□□ 0.92
SMARCA4-201ENST00000344626 CFAP44Q96MT7 982 aa20.8■□□□□ 0.92
SMARCA4-201ENST00000344626 CCDC141Q6ZP82 1450 aa20.8■□□□□ 0.92
SMARCA4-201ENST00000344626 KCNJ4P48050 445 aa20.79■□□□□ 0.92
SMARCA4-201ENST00000344626 RPGRIP1LQ68CZ1 1315 aa20.79■□□□□ 0.92
SMARCA4-201ENST00000344626 NCLP19338 710 aaKnown RBP20.79■□□□□ 0.92
SMARCA4-201ENST00000344626 DIAPH1O60610 1272 aaKnown RBP20.78■□□□□ 0.92
SMARCA4-201ENST00000344626 CDK19Q9BWU1 502 aa20.78■□□□□ 0.92
SMARCA4-201ENST00000344626 NBPF1Q3BBV0 1214 aa20.78■□□□□ 0.92
SMARCA4-201ENST00000344626 ZC3H6P61129 1189 aaKnown RBP20.77■□□□□ 0.92
SMARCA4-201ENST00000344626 PPP1R1BQ9UD71 204 aaPredicted RBP20.77■□□□□ 0.92
SMARCA4-201ENST00000344626 AMOTL2Q9Y2J4 779 aa20.77■□□□□ 0.92
SMARCA4-201ENST00000344626 TOM1O60784 492 aa20.77■□□□□ 0.92
SMARCA4-201ENST00000344626 RGS3P49796 1198 aa20.77■□□□□ 0.92
SMARCA4-201ENST00000344626 PDE3BQ13370 1112 aa20.77■□□□□ 0.92
SMARCA4-201ENST00000344626 KIAA1107Q9UPP5 1409 aa20.77■□□□□ 0.91
SMARCA4-201ENST00000344626 GORABQ5T7V8 394 aa20.77■□□□□ 0.91
SMARCA4-201ENST00000344626 NGLY1Q96IV0 654 aa20.76■□□□□ 0.91
SMARCA4-201ENST00000344626 CABP1Q9NZU7 370 aa20.76■□□□□ 0.91
SMARCA4-201ENST00000344626 FOXO3O43524 673 aa20.76■□□□□ 0.91
SMARCA4-201ENST00000344626 EIF2S2P20042 333 aaKnown RBP20.76■□□□□ 0.91
SMARCA4-201ENST00000344626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.76■□□□□ 0.911e-8■■□□□ 13.7
SMARCA4-201ENST00000344626 FRAT2O75474 233 aaPredicted RBP20.76■□□□□ 0.91
SMARCA4-201ENST00000344626 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
SMARCA4-201ENST00000344626 FGD1P98174 961 aa20.75■□□□□ 0.91
SMARCA4-201ENST00000344626 ERBINQ96RT1 1412 aa20.75■□□□□ 0.91
SMARCA4-201ENST00000344626 KIF21AQ7Z4S6 1674 aa20.74■□□□□ 0.91
SMARCA4-201ENST00000344626 SMC4Q9NTJ3 1288 aa20.74■□□□□ 0.91
SMARCA4-201ENST00000344626 RCAN3Q9UKA8 241 aa20.74■□□□□ 0.91
SMARCA4-201ENST00000344626 WAPLQ7Z5K2 1190 aa20.74■□□□□ 0.91
SMARCA4-201ENST00000344626 ITPRIPQ8IWB1 547 aa20.73■□□□□ 0.91
SMARCA4-201ENST00000344626 HMOX1P09601 288 aa20.73■□□□□ 0.91
SMARCA4-201ENST00000344626 DDX54Q8TDD1 881 aaKnown RBP20.73■□□□□ 0.91
SMARCA4-201ENST00000344626 ROCK1Q13464 1354 aa20.73■□□□□ 0.91
SMARCA4-201ENST00000344626 GOLGA6L22H0YM25 854 aa20.72■□□□□ 0.91
SMARCA4-201ENST00000344626 PCF11O94913 1555 aaKnown RBP20.71■□□□□ 0.91
SMARCA4-201ENST00000344626 ATP10BO94823 1461 aa20.71■□□□□ 0.91
SMARCA4-201ENST00000344626 SLC12A5Q9H2X9 1139 aa20.7■□□□□ 0.9
SMARCA4-201ENST00000344626 NECTIN2Q92692 538 aa20.7■□□□□ 0.9
SMARCA4-201ENST00000344626 HMMRO75330 724 aa20.69■□□□□ 0.9
SMARCA4-201ENST00000344626 WDR62O43379 1518 aa20.69■□□□□ 0.9
SMARCA4-201ENST00000344626 RWDD1Q9H446 243 aaPredicted RBP20.69■□□□□ 0.9
SMARCA4-201ENST00000344626 RTEL1-TNFRSF6BF6WH68 1400 aa20.69■□□□□ 0.9
SMARCA4-201ENST00000344626 ANKRD30BQ9BXX2 1392 aa20.69■□□□□ 0.9
SMARCA4-201ENST00000344626 WDR7Q9Y4E6 1490 aa20.69■□□□□ 0.9
SMARCA4-201ENST00000344626 MCCP23508 829 aa20.68■□□□□ 0.9
SMARCA4-201ENST00000344626 NAP1L2Q9ULW6 460 aaPredicted RBP20.68■□□□□ 0.9
SMARCA4-201ENST00000344626 CAMSAP2Q08AD1 1489 aa20.67■□□□□ 0.9
SMARCA4-201ENST00000344626 TNRQ92752 1358 aa20.67■□□□□ 0.9
SMARCA4-201ENST00000344626 ZNF692Q9BU19 519 aaPredicted RBP20.67■□□□□ 0.9
SMARCA4-201ENST00000344626 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
SMARCA4-201ENST00000344626 RBM42Q9BTD8 480 aaKnown RBP20.66■□□□□ 0.9
SMARCA4-201ENST00000344626 CADPS2Q86UW7 1296 aa20.66■□□□□ 0.9
SMARCA4-201ENST00000344626 TULP1O00294 542 aaPredicted RBP20.65■□□□□ 0.9
SMARCA4-201ENST00000344626 CLUAP1Q96AJ1 413 aa20.65■□□□□ 0.9
SMARCA4-201ENST00000344626 DHX29Q7Z478 1369 aaKnown RBP20.65■□□□□ 0.9
SMARCA4-201ENST00000344626 CCDC61Q9Y6R9 512 aa20.65■□□□□ 0.9
SMARCA4-201ENST00000344626 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.64■□□□□ 0.9
SMARCA4-201ENST00000344626 TATP17735 454 aaPredicted RBP20.64■□□□□ 0.89
SMARCA4-201ENST00000344626 GPATCH3Q96I76 525 aa20.64■□□□□ 0.89
SMARCA4-201ENST00000344626 MAP3K1Q13233 1512 aa20.64■□□□□ 0.89
SMARCA4-201ENST00000344626 PRKRIP1Q9H875 184 aaPredicted RBP20.63■□□□□ 0.89
SMARCA4-201ENST00000344626 NUDT16Q96DE0 195 aaKnown RBP20.63■□□□□ 0.89
SMARCA4-201ENST00000344626 PLCH2O75038 1416 aa20.62■□□□□ 0.89
SMARCA4-201ENST00000344626 CDK11BP21127 795 aaKnown RBP20.61■□□□□ 0.89
SMARCA4-201ENST00000344626 ZRSR1Q15695 479 aaKnown RBP20.61■□□□□ 0.89
SMARCA4-201ENST00000344626 NEXNQ0ZGT2 675 aa20.61■□□□□ 0.89
SMARCA4-201ENST00000344626 PHF8Q9UPP1 1060 aa20.61■□□□□ 0.89
SMARCA4-201ENST00000344626 KIAA1211Q6ZU35 1233 aa20.6■□□□□ 0.89
SMARCA4-201ENST00000344626 ANP32EQ9BTT0 268 aa20.59■□□□□ 0.89
SMARCA4-201ENST00000344626 E9PSI1 815 aa20.59■□□□□ 0.89
SMARCA4-201ENST00000344626 RIPK4P57078 832 aa20.59■□□□□ 0.89
SMARCA4-201ENST00000344626 ERICH6BQ5W0A0 696 aa20.59■□□□□ 0.89
SMARCA4-201ENST00000344626 NCKAP5LQ9HCH0 1330 aa20.58■□□□□ 0.89
SMARCA4-201ENST00000344626 TCERG1O14776 1098 aaKnown RBP20.58■□□□□ 0.89
SMARCA4-201ENST00000344626 PLEKHO1Q53GL0 409 aaPredicted RBP20.58■□□□□ 0.88
SMARCA4-201ENST00000344626 CCDC7Q96M83 1385 aa20.57■□□□□ 0.88
SMARCA4-201ENST00000344626 MTHFSP49914 203 aa20.57■□□□□ 0.88
SMARCA4-201ENST00000344626 APAF1O14727 1248 aa20.57■□□□□ 0.88
SMARCA4-201ENST00000344626 FAM177BA6PVY3 158 aa20.56■□□□□ 0.88
SMARCA4-201ENST00000344626 B4GALNT3Q6L9W6 998 aa20.56■□□□□ 0.88
SMARCA4-201ENST00000344626 KIF7Q2M1P5 1343 aa20.56■□□□□ 0.88
SMARCA4-201ENST00000344626 ABCC5O15440 1437 aa20.55■□□□□ 0.88
SMARCA4-201ENST00000344626 ABCC2Q92887 1545 aa20.55■□□□□ 0.88
SMARCA4-201ENST00000344626 PTPN23Q9H3S7 1636 aa20.55■□□□□ 0.88
SMARCA4-201ENST00000344626 MSH6P52701 1360 aa20.55■□□□□ 0.88
SMARCA4-201ENST00000344626 BCL2L13Q9BXK5 485 aa20.55■□□□□ 0.88
SMARCA4-201ENST00000344626 TSPYL4Q9UJ04 414 aa20.55■□□□□ 0.88
SMARCA4-201ENST00000344626 AIMP1Q12904 312 aaKnown RBP20.54■□□□□ 0.88
SMARCA4-201ENST00000344626 NUP160Q12769 1436 aa20.54■□□□□ 0.88
SMARCA4-201ENST00000344626 RUNDC1Q96C34 613 aa20.54■□□□□ 0.88
SMARCA4-201ENST00000344626 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
SMARCA4-201ENST00000344626 SMG6Q86US8 1419 aaKnown RBP20.53■□□□□ 0.88
SMARCA4-201ENST00000344626 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
SMARCA4-201ENST00000344626 HSP90AB1P08238 724 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms