RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 CABP2Q9NPB3 220 aa24.06■■□□□ 1.44
SH2B3-201ENST00000341259 CFAP70Q5T0N1 1121 aa24.06■■□□□ 1.44
SH2B3-201ENST00000341259 GZF1Q9H116 711 aaPredicted RBP24.05■■□□□ 1.44
SH2B3-201ENST00000341259 LAMC3Q9Y6N6 1575 aa24.05■■□□□ 1.44
SH2B3-201ENST00000341259 NBPF1Q3BBV0 1214 aa24.04■■□□□ 1.44
SH2B3-201ENST00000341259 GORABQ5T7V8 394 aa24.04■■□□□ 1.44
SH2B3-201ENST00000341259 ANKRD45Q5TZF3 282 aa24.04■■□□□ 1.44
SH2B3-201ENST00000341259 CUL7Q14999 1698 aa24.04■■□□□ 1.44
SH2B3-201ENST00000341259 IQGAP2Q13576 1575 aa24.04■■□□□ 1.44
SH2B3-201ENST00000341259 C1orf141Q5JVX7 400 aa24.03■■□□□ 1.44
SH2B3-201ENST00000341259 TAF7LQ5H9L4 462 aa24.02■■□□□ 1.44
SH2B3-201ENST00000341259 GGNBP2Q9H3C7 697 aa24.02■■□□□ 1.44
SH2B3-201ENST00000341259 GNL2Q13823 731 aaKnown RBP24.01■■□□□ 1.43
SH2B3-201ENST00000341259 DDX19BQ9UMR2 479 aa24.01■■□□□ 1.43
SH2B3-201ENST00000341259 CCDC9Q9Y3X0 531 aaKnown RBP24.01■■□□□ 1.43
SH2B3-201ENST00000341259 FOXD4L1Q9NU39 408 aa24■■□□□ 1.43
SH2B3-201ENST00000341259 DZIP1LQ8IYY4 767 aaKnown RBP24■■□□□ 1.43
SH2B3-201ENST00000341259 ADAMTS8Q9UP79 889 aa24■■□□□ 1.43
SH2B3-201ENST00000341259 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
SH2B3-201ENST00000341259 MSNP26038 577 aaKnown RBP23.99■■□□□ 1.43
SH2B3-201ENST00000341259 NRDCO43847 1150 aa23.98■■□□□ 1.43
SH2B3-201ENST00000341259 TULP1O00294 542 aaPredicted RBP23.98■■□□□ 1.43
SH2B3-201ENST00000341259 NAIPQ13075 1403 aa23.98■■□□□ 1.43
SH2B3-201ENST00000341259 SCAPERQ9BY12 1400 aa23.97■■□□□ 1.43
SH2B3-201ENST00000341259 TEFQ10587 303 aa23.97■■□□□ 1.43
SH2B3-201ENST00000341259 PPP2R1AP30153 589 aa23.96■■□□□ 1.43
SH2B3-201ENST00000341259 NOL8Q76FK4 1167 aaKnown RBP23.96■■□□□ 1.43
SH2B3-201ENST00000341259 WDR97A6NE52 1622 aa23.96■■□□□ 1.43
SH2B3-201ENST00000341259 ROCK1Q13464 1354 aa23.95■■□□□ 1.42
SH2B3-201ENST00000341259 ST18O60284 1047 aa23.95■■□□□ 1.42
SH2B3-201ENST00000341259 DRC7Q8IY82 874 aa23.94■■□□□ 1.42
SH2B3-201ENST00000341259 HMOX1P09601 288 aa23.94■■□□□ 1.42
SH2B3-201ENST00000341259 API5Q9BZZ5 524 aaKnown RBP23.94■■□□□ 1.42
SH2B3-201ENST00000341259 HSP90B1P14625 803 aaKnown RBP23.93■■□□□ 1.42
SH2B3-201ENST00000341259 PSME1Q06323 249 aa23.93■■□□□ 1.42
SH2B3-201ENST00000341259 MTHFSP49914 203 aa23.92■■□□□ 1.42
SH2B3-201ENST00000341259 SYAP1Q96A49 352 aaPredicted RBP23.92■■□□□ 1.42
SH2B3-201ENST00000341259 GNAI1P63096 354 aa23.91■■□□□ 1.42
SH2B3-201ENST00000341259 RILPL2Q969X0 211 aa23.91■■□□□ 1.42
SH2B3-201ENST00000341259 HTATSF1O43719 755 aaKnown RBP23.91■■□□□ 1.42
SH2B3-201ENST00000341259 EIF2S2P20042 333 aaKnown RBP23.91■■□□□ 1.42
SH2B3-201ENST00000341259 SLC4A3P48751 1232 aa23.91■■□□□ 1.42
SH2B3-201ENST00000341259 MAP3K1Q13233 1512 aa23.9■■□□□ 1.42
SH2B3-201ENST00000341259 PTPN23Q9H3S7 1636 aa23.89■■□□□ 1.42
SH2B3-201ENST00000341259 GOLGA6L3A6NEY3 463 aa23.89■■□□□ 1.41
SH2B3-201ENST00000341259 BIVM-ERCC5R4GMW8 1640 aa23.89■■□□□ 1.41
SH2B3-201ENST00000341259 KIF16BQ96L93 1317 aa23.89■■□□□ 1.41
SH2B3-201ENST00000341259 NECTIN2Q92692 538 aa23.88■■□□□ 1.41
SH2B3-201ENST00000341259 ISY1Q9ULR0 285 aaKnown RBP23.88■■□□□ 1.41
SH2B3-201ENST00000341259 ARHGEF11O15085 1522 aa23.88■■□□□ 1.41
SH2B3-201ENST00000341259 CDCA7LQ96GN5 454 aa23.88■■□□□ 1.41
SH2B3-201ENST00000341259 CHAF1AQ13111 956 aaPredicted RBP23.87■■□□□ 1.41
SH2B3-201ENST00000341259 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
SH2B3-201ENST00000341259 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
SH2B3-201ENST00000341259 ERBINQ96RT1 1412 aa23.87■■□□□ 1.41
SH2B3-201ENST00000341259 FANCIQ9NVI1 1328 aa23.85■■□□□ 1.41
SH2B3-201ENST00000341259 PANK1Q8TE04 598 aa23.85■■□□□ 1.41
SH2B3-201ENST00000341259 PRAM1Q96QH2 718 aa23.85■■□□□ 1.41
SH2B3-201ENST00000341259 TTC5Q8N0Z6 440 aa23.85■■□□□ 1.41
SH2B3-201ENST00000341259 TCP11L2Q8N4U5 519 aa23.85■■□□□ 1.41
SH2B3-201ENST00000341259 TSPYL4Q9UJ04 414 aa23.84■■□□□ 1.41
SH2B3-201ENST00000341259 EVA1CP58658 441 aa23.84■■□□□ 1.41
SH2B3-201ENST00000341259 PLB1Q6P1J6 1458 aa23.83■■□□□ 1.41
SH2B3-201ENST00000341259 CCDC141Q6ZP82 1450 aa23.83■■□□□ 1.41
SH2B3-201ENST00000341259 GRIN2AQ12879 1464 aa23.83■■□□□ 1.41
SH2B3-201ENST00000341259 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.4
SH2B3-201ENST00000341259 DNAJC5BQ9UF47 199 aa23.82■■□□□ 1.4
SH2B3-201ENST00000341259 NEXNQ0ZGT2 675 aa23.82■■□□□ 1.4
SH2B3-201ENST00000341259 C9orf78Q9NZ63 289 aaPredicted RBP23.82■■□□□ 1.4
SH2B3-201ENST00000341259 ABCC5O15440 1437 aa23.82■■□□□ 1.4
SH2B3-201ENST00000341259 FKBP5Q13451 457 aaPredicted RBP23.81■■□□□ 1.4
SH2B3-201ENST00000341259 CSPP1Q1MSJ5 1256 aa23.81■■□□□ 1.4
SH2B3-201ENST00000341259 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
SH2B3-201ENST00000341259 SLC12A5Q9H2X9 1139 aa23.8■■□□□ 1.4
SH2B3-201ENST00000341259 AAMPQ13685 434 aa23.8■■□□□ 1.4
SH2B3-201ENST00000341259 DDX11L8A8MPP1 907 aa23.8■■□□□ 1.4
SH2B3-201ENST00000341259 FOXD4L5Q5VV16 416 aaPredicted RBP23.8■■□□□ 1.4
SH2B3-201ENST00000341259 FOXD4L4Q8WXT5 416 aaPredicted RBP23.8■■□□□ 1.4
SH2B3-201ENST00000341259 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
SH2B3-201ENST00000341259 NUTM2GQ5VZR2 741 aa23.78■■□□□ 1.4
SH2B3-201ENST00000341259 PNISRQ8TF01 805 aaKnown RBP23.78■■□□□ 1.4
SH2B3-201ENST00000341259 KIF14Q15058 1648 aa23.78■■□□□ 1.4
SH2B3-201ENST00000341259 RAPGEF3O95398 923 aa23.77■■□□□ 1.4
SH2B3-201ENST00000341259 SLC52A1Q9NWF4 448 aa23.77■■□□□ 1.4
SH2B3-201ENST00000341259 NLRP6P59044 892 aa23.76■■□□□ 1.39
SH2B3-201ENST00000341259 TXNDC2Q86VQ3 553 aa23.76■■□□□ 1.39
SH2B3-201ENST00000341259 DIAPH3Q9NSV4 1193 aa23.76■■□□□ 1.39
SH2B3-201ENST00000341259 ANKRD30BQ9BXX2 1392 aa23.75■■□□□ 1.39
SH2B3-201ENST00000341259 CDK19Q9BWU1 502 aa23.75■■□□□ 1.39
SH2B3-201ENST00000341259 KIAA2012Q0VF49 1180 aa23.75■■□□□ 1.39
SH2B3-201ENST00000341259 TMX4Q9H1E5 349 aaPredicted RBP23.75■■□□□ 1.39
SH2B3-201ENST00000341259 REC8O95072 547 aa23.74■■□□□ 1.39
SH2B3-201ENST00000341259 DDX58O95786 925 aaKnown RBP23.74■■□□□ 1.39
SH2B3-201ENST00000341259 GTF2E1P29083 439 aaPredicted RBP23.74■■□□□ 1.39
SH2B3-201ENST00000341259 RPGRIP1LQ68CZ1 1315 aa23.74■■□□□ 1.39
SH2B3-201ENST00000341259 PRKAR2BP31323 418 aa23.74■■□□□ 1.39
SH2B3-201ENST00000341259 AKNAQ7Z591 1439 aa23.73■■□□□ 1.39
SH2B3-201ENST00000341259 CCDC184Q52MB2 194 aa23.73■■□□□ 1.39
SH2B3-201ENST00000341259 LNPKQ9C0E8 428 aa23.73■■□□□ 1.39
SH2B3-201ENST00000341259 TOMM22Q9NS69 142 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms