RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PLEKHG5O94827 1062 aa19.42■□□□□ 0.7
ATXN3-201ENST00000340660 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
ATXN3-201ENST00000340660 AFF2P51816 1311 aa19.41■□□□□ 0.7
ATXN3-201ENST00000340660 PZPP20742 1482 aa19.41■□□□□ 0.7
ATXN3-201ENST00000340660 MIA2Q96PC5 1412 aa19.4■□□□□ 0.7
ATXN3-201ENST00000340660 RANGAP1P46060 587 aaPredicted RBP19.39■□□□□ 0.69
ATXN3-201ENST00000340660 YY1P25490 414 aa19.38■□□□□ 0.69
ATXN3-201ENST00000340660 RBM6P78332 1123 aaKnown RBP19.38■□□□□ 0.69
ATXN3-201ENST00000340660 PLCD3Q8N3E9 789 aa19.38■□□□□ 0.69
ATXN3-201ENST00000340660 PHF12Q96QT6 1004 aa19.38■□□□□ 0.69
ATXN3-201ENST00000340660 SPAG9O60271 1321 aaKnown RBP19.37■□□□□ 0.69
ATXN3-201ENST00000340660 PREX2Q70Z35 1606 aa19.36■□□□□ 0.69
ATXN3-201ENST00000340660 TROQ12816 1431 aaPredicted RBP19.35■□□□□ 0.69
ATXN3-201ENST00000340660 POTEIP0CG38 1075 aa19.35■□□□□ 0.69
ATXN3-201ENST00000340660 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
ATXN3-201ENST00000340660 QTRT2Q9H974 415 aaKnown RBP19.33■□□□□ 0.68
ATXN3-201ENST00000340660 SLAIN2Q9P270 581 aa19.33■□□□□ 0.68
ATXN3-201ENST00000340660 GALR2O43603 387 aaPredicted RBP19.32■□□□□ 0.68
ATXN3-201ENST00000340660 SCAF11Q99590 1463 aaKnown RBP19.31■□□□□ 0.68
ATXN3-201ENST00000340660 INO80Q9ULG1 1556 aaPredicted RBP19.31■□□□□ 0.68
ATXN3-201ENST00000340660 TSPYL2Q9H2G4 693 aaPredicted RBP19.29■□□□□ 0.68
ATXN3-201ENST00000340660 LTKP29376 864 aa19.28■□□□□ 0.68
ATXN3-201ENST00000340660 FBXO3Q9UK99 471 aa19.28■□□□□ 0.68
ATXN3-201ENST00000340660 CDK11AQ9UQ88 783 aaPredicted RBP19.28■□□□□ 0.68
ATXN3-201ENST00000340660 SYCP2Q9BX26 1530 aa19.27■□□□□ 0.68
ATXN3-201ENST00000340660 TIAM1Q13009 1591 aa19.26■□□□□ 0.67
ATXN3-201ENST00000340660 CLIP1P30622 1438 aa19.25■□□□□ 0.67
ATXN3-201ENST00000340660 NHSL1Q5SYE7 1610 aa19.25■□□□□ 0.67
ATXN3-201ENST00000340660 RASEFQ8IZ41 740 aa19.25■□□□□ 0.67
ATXN3-201ENST00000340660 PROSER2Q86WR7 435 aaPredicted RBP19.24■□□□□ 0.67
ATXN3-201ENST00000340660 CCDC125Q86Z20 511 aa19.24■□□□□ 0.67
ATXN3-201ENST00000340660 NWD1Q149M9 1564 aa19.23■□□□□ 0.67
ATXN3-201ENST00000340660 CCDC61Q9Y6R9 512 aa19.23■□□□□ 0.67
ATXN3-201ENST00000340660 PRDM15P57071 1507 aaPredicted RBP19.23■□□□□ 0.67
ATXN3-201ENST00000340660 AHDC1Q5TGY3 1603 aaPredicted RBP19.22■□□□□ 0.67
ATXN3-201ENST00000340660 MSH6P52701 1360 aa19.22■□□□□ 0.67
ATXN3-201ENST00000340660 SENP3-EIF4A1A0A087X0R7 540 aa19.22■□□□□ 0.67
ATXN3-201ENST00000340660 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.67
ATXN3-201ENST00000340660 DCBLD2Q96PD2 775 aa19.22■□□□□ 0.67
ATXN3-201ENST00000340660 DIP2AQ14689 1571 aa19.22■□□□□ 0.67
ATXN3-201ENST00000340660 ZBTB47Q9UFB7 747 aaPredicted RBP19.21■□□□□ 0.67
ATXN3-201ENST00000340660 ATP1B4Q9UN42 357 aaPredicted RBP19.21■□□□□ 0.67
ATXN3-201ENST00000340660 KCNA6P17658 529 aa19.2■□□□□ 0.66
ATXN3-201ENST00000340660 NGLY1Q96IV0 654 aa19.2■□□□□ 0.66
ATXN3-201ENST00000340660 ARHGAP23Q9P227 1491 aa19.2■□□□□ 0.66
ATXN3-201ENST00000340660 TXNDC2Q86VQ3 553 aa19.19■□□□□ 0.66
ATXN3-201ENST00000340660 C8orf37Q96NL8 207 aa19.19■□□□□ 0.66
ATXN3-201ENST00000340660 NCOA2Q15596 1464 aa19.19■□□□□ 0.66
ATXN3-201ENST00000340660 ADGBQ8N7X0 1667 aa19.19■□□□□ 0.66
ATXN3-201ENST00000340660 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
ATXN3-201ENST00000340660 CDC42BPAQ5VT25 1732 aa19.17■□□□□ 0.66
ATXN3-201ENST00000340660 UBR1Q8IWV7 1749 aa19.17■□□□□ 0.66
ATXN3-201ENST00000340660 SLIT1O75093 1534 aa19.16■□□□□ 0.66
ATXN3-201ENST00000340660 HRCP23327 699 aa19.16■□□□□ 0.66
ATXN3-201ENST00000340660 NUBP1P53384 320 aa19.15■□□□□ 0.66
ATXN3-201ENST00000340660 WASHC2CQ9Y4E1 1318 aa19.15■□□□□ 0.66
ATXN3-201ENST00000340660 BCL9LQ86UU0 1499 aa19.15■□□□□ 0.66
ATXN3-201ENST00000340660 ABCC3O15438 1527 aa19.15■□□□□ 0.66
ATXN3-201ENST00000340660 DEFB132Q7Z7B7 95 aa19.14■□□□□ 0.65
ATXN3-201ENST00000340660 PSDA5PKW4 1024 aaPredicted RBP19.13■□□□□ 0.65
ATXN3-201ENST00000340660 MS4A3Q96HJ5 214 aa19.13■□□□□ 0.65
ATXN3-201ENST00000340660 NKTRP30414 1462 aaKnown RBP19.13■□□□□ 0.65
ATXN3-201ENST00000340660 KDM5AP29375 1690 aaKnown RBP19.12■□□□□ 0.65
ATXN3-201ENST00000340660 DHX29Q7Z478 1369 aaKnown RBP19.09■□□□□ 0.65
ATXN3-201ENST00000340660 KIF3BO15066 747 aa19.09■□□□□ 0.65
ATXN3-201ENST00000340660 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.65
ATXN3-201ENST00000340660 KIAA1107Q9UPP5 1409 aa19.08■□□□□ 0.65
ATXN3-201ENST00000340660 VASPP50552 380 aaPredicted RBP19.08■□□□□ 0.64
ATXN3-201ENST00000340660 KIF12Q96FN5 646 aa19.08■□□□□ 0.64
ATXN3-201ENST00000340660 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
ATXN3-201ENST00000340660 ERVK-7P63135 1459 aa19.07■□□□□ 0.64
ATXN3-201ENST00000340660 MAST1Q9Y2H9 1570 aa19.05■□□□□ 0.64
ATXN3-201ENST00000340660 SLC26A8Q96RN1 970 aa19.04■□□□□ 0.64
ATXN3-201ENST00000340660 EID1Q9Y6B2 187 aa19.04■□□□□ 0.64
ATXN3-201ENST00000340660 CEP350Q5VT06 3117 aa19.04■□□□□ 0.64
ATXN3-201ENST00000340660 TET3O43151 1660 aa19.02■□□□□ 0.64
ATXN3-201ENST00000340660 FMN1Q68DA7 1419 aa19.02■□□□□ 0.64
ATXN3-201ENST00000340660 SETD5Q9C0A6 1442 aa19.02■□□□□ 0.64
ATXN3-201ENST00000340660 LHX8Q68G74 356 aa19.02■□□□□ 0.64
ATXN3-201ENST00000340660 TRPC5Q9UL62 973 aaPredicted RBP19.01■□□□□ 0.63
ATXN3-201ENST00000340660 GPATCH8Q9UKJ3 1502 aaKnown RBP19■□□□□ 0.63
ATXN3-201ENST00000340660 ATRNO75882 1429 aa19■□□□□ 0.63
ATXN3-201ENST00000340660 PLEKHH2Q8IVE3 1493 aa18.99■□□□□ 0.63
ATXN3-201ENST00000340660 USP21Q9UK80 565 aa18.99■□□□□ 0.63
ATXN3-201ENST00000340660 TMEM2Q9UHN6 1383 aa18.98■□□□□ 0.63
ATXN3-201ENST00000340660 MAP3K13O43283 966 aa18.98■□□□□ 0.63
ATXN3-201ENST00000340660 C1QTNF8P60827 252 aa18.98■□□□□ 0.63
ATXN3-201ENST00000340660 BRINP3Q76B58 766 aa18.98■□□□□ 0.63
ATXN3-201ENST00000340660 ADAMTS2O95450 1211 aa18.97■□□□□ 0.63
ATXN3-201ENST00000340660 PNPLA6Q8IY17 1366 aa18.96■□□□□ 0.63
ATXN3-201ENST00000340660 ZNF784Q8NCA9 323 aaPredicted RBP18.96■□□□□ 0.63
ATXN3-201ENST00000340660 FAM212AQ96EL1 285 aa18.96■□□□□ 0.63
ATXN3-201ENST00000340660 RTEL1-TNFRSF6BF6WH68 1400 aa18.96■□□□□ 0.63
ATXN3-201ENST00000340660 ASTLQ6HA08 431 aaPredicted RBP18.94■□□□□ 0.62
ATXN3-201ENST00000340660 CAMSAP2Q08AD1 1489 aa18.93■□□□□ 0.62
ATXN3-201ENST00000340660 PELP1Q8IZL8 1130 aaKnown RBP18.93■□□□□ 0.62
ATXN3-201ENST00000340660 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.91■□□□□ 0.62
ATXN3-201ENST00000340660 ATMINO43313 823 aaPredicted RBP18.91■□□□□ 0.62
ATXN3-201ENST00000340660 CADPS2Q86UW7 1296 aa18.91■□□□□ 0.62
ATXN3-201ENST00000340660 FNBP4Q8N3X1 1017 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms