RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SLC26A8Q96RN1 970 aa24.22■■□□□ 1.47
LINC01116-202ENST00000339037 TET3O43151 1660 aa24.21■■□□□ 1.47
LINC01116-202ENST00000339037 KCNA6P17658 529 aa24.21■■□□□ 1.47
LINC01116-202ENST00000339037 FAM135BQ49AJ0 1406 aa24.18■■□□□ 1.46
LINC01116-202ENST00000339037 BCANQ96GW7 911 aa24.17■■□□□ 1.46
LINC01116-202ENST00000339037 NKTRP30414 1462 aaKnown RBP24.16■■□□□ 1.46
LINC01116-202ENST00000339037 PROSER2Q86WR7 435 aaPredicted RBP24.16■■□□□ 1.46
LINC01116-202ENST00000339037 RBM33Q96EV2 1170 aaKnown RBP24.14■■□□□ 1.45
LINC01116-202ENST00000339037 NWD1Q149M9 1564 aa24.13■■□□□ 1.45
LINC01116-202ENST00000339037 ZFYVE9O95405 1425 aa24.13■■□□□ 1.45
LINC01116-202ENST00000339037 NPM3O75607 178 aaKnown RBP24.13■■□□□ 1.45
LINC01116-202ENST00000339037 PPP1R15AO75807 674 aaPredicted RBP24.11■■□□□ 1.45
LINC01116-202ENST00000339037 PLEKHG1Q9ULL1 1385 aa24.11■■□□□ 1.45
LINC01116-202ENST00000339037 RIMS2Q9UQ26 1411 aa24.1■■□□□ 1.45
LINC01116-202ENST00000339037 UNC13BO14795 1591 aa24.09■■□□□ 1.45
LINC01116-202ENST00000339037 MSH6P52701 1360 aa24.09■■□□□ 1.45
LINC01116-202ENST00000339037 HDGFP51858 240 aaKnown RBP24.09■■□□□ 1.45
LINC01116-202ENST00000339037 GCC2Q8IWJ2 1684 aa24.08■■□□□ 1.44
LINC01116-202ENST00000339037 ROBO1Q9Y6N7 1651 aa24.08■■□□□ 1.44
LINC01116-202ENST00000339037 TMEM131LA2VDJ0 1609 aa24.07■■□□□ 1.44
LINC01116-202ENST00000339037 CNKSR2Q8WXI2 1034 aa24.07■■□□□ 1.44
LINC01116-202ENST00000339037 ROCK1Q13464 1354 aa24.06■■□□□ 1.44
LINC01116-202ENST00000339037 MYO5BQ9ULV0 1848 aa24.05■■□□□ 1.44
LINC01116-202ENST00000339037 RGS17Q9UGC6 210 aaPredicted RBP24.05■■□□□ 1.44
LINC01116-202ENST00000339037 CHGAP10645 457 aaKnown RBP24.04■■□□□ 1.44
LINC01116-202ENST00000339037 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.03■■□□□ 1.44
LINC01116-202ENST00000339037 SLAIN2Q9P270 581 aa24.01■■□□□ 1.43
LINC01116-202ENST00000339037 TBX22Q9Y458 520 aa24.01■■□□□ 1.43
LINC01116-202ENST00000339037 E9PCH4 1651 aa24.01■■□□□ 1.43
LINC01116-202ENST00000339037 IQGAP3Q86VI3 1631 aa24■■□□□ 1.43
LINC01116-202ENST00000339037 CHD2O14647 1828 aaKnown RBP23.99■■□□□ 1.43
LINC01116-202ENST00000339037 NUP155O75694 1391 aa23.98■■□□□ 1.43
LINC01116-202ENST00000339037 MAPK8IP2Q13387 824 aaPredicted RBP23.97■■□□□ 1.43
LINC01116-202ENST00000339037 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
LINC01116-202ENST00000339037 ADAMTS13Q76LX8 1427 aa23.96■■□□□ 1.43
LINC01116-202ENST00000339037 NCOA3Q9Y6Q9 1424 aa23.96■■□□□ 1.43
LINC01116-202ENST00000339037 SLC4A1APQ9BWU0 796 aaKnown RBP23.96■■□□□ 1.43
LINC01116-202ENST00000339037 DIP2AQ14689 1571 aa23.95■■□□□ 1.43
LINC01116-202ENST00000339037 ITGAEP38570 1179 aa23.95■■□□□ 1.42
LINC01116-202ENST00000339037 C14orf37Q86TY3 774 aa23.95■■□□□ 1.42
LINC01116-202ENST00000339037 PIK3R4Q99570 1358 aa23.93■■□□□ 1.42
LINC01116-202ENST00000339037 PHLPP1O60346 1717 aa23.93■■□□□ 1.42
LINC01116-202ENST00000339037 JCADQ9P266 1359 aa23.91■■□□□ 1.42
LINC01116-202ENST00000339037 POTEAQ6S8J7 498 aa23.91■■□□□ 1.42
LINC01116-202ENST00000339037 CADPS2Q86UW7 1296 aa23.89■■□□□ 1.41
LINC01116-202ENST00000339037 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
LINC01116-202ENST00000339037 TRPM2O94759 1503 aa23.88■■□□□ 1.41
LINC01116-202ENST00000339037 ATF3P18847 181 aa23.87■■□□□ 1.41
LINC01116-202ENST00000339037 COL16A1Q07092 1604 aaPredicted RBP23.87■■□□□ 1.41
LINC01116-202ENST00000339037 PPARGC1BQ86YN6 1023 aaKnown RBP23.85■■□□□ 1.41
LINC01116-202ENST00000339037 AMOTL2Q9Y2J4 779 aa23.84■■□□□ 1.41
LINC01116-202ENST00000339037 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
LINC01116-202ENST00000339037 PTPRUQ92729 1446 aa23.83■■□□□ 1.4
LINC01116-202ENST00000339037 SPHKAPQ2M3C7 1700 aa23.81■■□□□ 1.4
LINC01116-202ENST00000339037 AHDC1Q5TGY3 1603 aaPredicted RBP23.81■■□□□ 1.4
LINC01116-202ENST00000339037 ZNF326Q5BKZ1 582 aaKnown RBP23.8■■□□□ 1.4
LINC01116-202ENST00000339037 SETBP1Q9Y6X0 1596 aa23.8■■□□□ 1.4
LINC01116-202ENST00000339037 SPATA31A6Q5VVP1 1343 aa23.8■■□□□ 1.4
LINC01116-202ENST00000339037 DCCP43146 1447 aa23.78■■□□□ 1.4
LINC01116-202ENST00000339037 NRXN3Q9Y4C0 1643 aa23.78■■□□□ 1.4
LINC01116-202ENST00000339037 LRP6O75581 1613 aa23.77■■□□□ 1.4
LINC01116-202ENST00000339037 XRN1Q8IZH2 1706 aaKnown RBP23.76■■□□□ 1.39
LINC01116-202ENST00000339037 BRINP3Q76B58 766 aa23.76■■□□□ 1.39
LINC01116-202ENST00000339037 MEX3CQ5U5Q3 659 aaKnown RBP23.75■■□□□ 1.39
LINC01116-202ENST00000339037 METP08581 1390 aa23.74■■□□□ 1.39
LINC01116-202ENST00000339037 SHPRHQ149N8 1683 aa23.73■■□□□ 1.39
LINC01116-202ENST00000339037 ASXL1Q8IXJ9 1541 aa23.71■■□□□ 1.39
LINC01116-202ENST00000339037 CLTCL1P53675 1640 aa23.7■■□□□ 1.39
LINC01116-202ENST00000339037 RRBP1Q9P2E9 1410 aaKnown RBP23.7■■□□□ 1.38
LINC01116-202ENST00000339037 ZNF772Q68DY9 489 aaPredicted RBP23.7■■□□□ 1.38
LINC01116-202ENST00000339037 SETD1AO15047 1707 aaKnown RBP23.7■■□□□ 1.38
LINC01116-202ENST00000339037 NEXMIFQ5QGS0 1516 aa23.69■■□□□ 1.38
LINC01116-202ENST00000339037 MST1RQ04912 1400 aa23.69■■□□□ 1.38
LINC01116-202ENST00000339037 NAIPQ13075 1403 aa23.69■■□□□ 1.38
LINC01116-202ENST00000339037 ADGRL3Q9HAR2 1447 aa23.67■■□□□ 1.38
LINC01116-202ENST00000339037 SETD5Q9C0A6 1442 aa23.65■■□□□ 1.38
LINC01116-202ENST00000339037 NUTM2BA6NNL0 878 aaPredicted RBP23.64■■□□□ 1.37
LINC01116-202ENST00000339037 NUTM2EB1AL46 878 aaPredicted RBP23.64■■□□□ 1.37
LINC01116-202ENST00000339037 NUTM2AQ8IVF1 878 aaPredicted RBP23.64■■□□□ 1.37
LINC01116-202ENST00000339037 NHSL1Q5SYE7 1610 aa23.62■■□□□ 1.37
LINC01116-202ENST00000339037 KIF1BO60333 1816 aa23.61■■□□□ 1.37
LINC01116-202ENST00000339037 NALCNQ8IZF0 1738 aa23.6■■□□□ 1.37
LINC01116-202ENST00000339037 TRIM52Q96A61 297 aa23.6■■□□□ 1.37
LINC01116-202ENST00000339037 LRRC59Q96AG4 307 aaKnown RBP23.6■■□□□ 1.37
LINC01116-202ENST00000339037 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
LINC01116-202ENST00000339037 PTCH1Q13635 1447 aa23.59■■□□□ 1.37
LINC01116-202ENST00000339037 VGFO15240 615 aaPredicted RBP23.59■■□□□ 1.37
LINC01116-202ENST00000339037 RXRBP28702 533 aa23.57■■□□□ 1.36
LINC01116-202ENST00000339037 DDX17Q92841 729 aaKnown RBP23.57■■□□□ 1.36
LINC01116-202ENST00000339037 AFF2P51816 1311 aa23.56■■□□□ 1.36
LINC01116-202ENST00000339037 C1orf167Q5SNV9 1468 aa23.55■■□□□ 1.36
LINC01116-202ENST00000339037 PNPLA6Q8IY17 1366 aa23.54■■□□□ 1.36
LINC01116-202ENST00000339037 ROBO2Q9HCK4 1378 aa23.54■■□□□ 1.36
LINC01116-202ENST00000339037 RPGRIP1LQ68CZ1 1315 aa23.54■■□□□ 1.36
LINC01116-202ENST00000339037 PRAG1Q86YV5 1406 aa23.52■■□□□ 1.36
LINC01116-202ENST00000339037 CDK12Q9NYV4 1490 aaPredicted RBP23.52■■□□□ 1.36
LINC01116-202ENST00000339037 UPF1Q92900 1129 aaKnown RBP eCLIP23.51■■□□□ 1.35
LINC01116-202ENST00000339037 C8orf37Q96NL8 207 aa23.51■■□□□ 1.35
LINC01116-202ENST00000339037 ORAI2Q96SN7 254 aa23.47■■□□□ 1.35
LINC01116-202ENST00000339037 SRCAPQ6ZRS2 3230 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms