RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 KIF3BO15066 747 aa20.39■□□□□ 0.85
SATB1-201ENST00000338745 ST20-MTHFSA0A0A6YYL1 179 aa20.39■□□□□ 0.85
SATB1-201ENST00000338745 FAM43AQ8N2R8 423 aa20.38■□□□□ 0.85
SATB1-201ENST00000338745 SASS6Q6UVJ0 657 aa20.37■□□□□ 0.85
SATB1-201ENST00000338745 IFT57Q9NWB7 429 aa20.37■□□□□ 0.85
SATB1-201ENST00000338745 GTF2E1P29083 439 aaPredicted RBP20.37■□□□□ 0.85
SATB1-201ENST00000338745 EIF2S2P20042 333 aaKnown RBP20.36■□□□□ 0.85
SATB1-201ENST00000338745 C1orf141Q5JVX7 400 aa20.36■□□□□ 0.85
SATB1-201ENST00000338745 CHMP5Q9NZZ3 219 aa20.35■□□□□ 0.85
SATB1-201ENST00000338745 APPP05067 770 aa20.35■□□□□ 0.85
SATB1-201ENST00000338745 R3HCC1Q9Y3T6 440 aaKnown RBP20.35■□□□□ 0.85
SATB1-201ENST00000338745 FHOD3Q2V2M9 1422 aa20.34■□□□□ 0.85
SATB1-201ENST00000338745 REC8O95072 547 aa20.34■□□□□ 0.85
SATB1-201ENST00000338745 RUFY2Q8WXA3 655 aa20.34■□□□□ 0.85
SATB1-201ENST00000338745 NAP1L1P55209 391 aaKnown RBP20.34■□□□□ 0.85
SATB1-201ENST00000338745 TCEAL9Q9UHQ7 104 aa20.34■□□□□ 0.85
SATB1-201ENST00000338745 VPS37CA5D8V6 355 aaPredicted RBP20.33■□□□□ 0.85
SATB1-201ENST00000338745 CCDC18Q5T9S5 1454 aa20.33■□□□□ 0.85
SATB1-201ENST00000338745 RUFY1Q96T51 708 aa20.33■□□□□ 0.85
SATB1-201ENST00000338745 HOOK1Q9UJC3 728 aaKnown RBP20.33■□□□□ 0.85
SATB1-201ENST00000338745 CALRP27797 417 aaKnown RBP20.33■□□□□ 0.84
SATB1-201ENST00000338745 C9orf78Q9NZ63 289 aaPredicted RBP20.33■□□□□ 0.84
SATB1-201ENST00000338745 AK7Q96M32 723 aa20.32■□□□□ 0.84
SATB1-201ENST00000338745 USP47Q96K76 1375 aa20.32■□□□□ 0.84
SATB1-201ENST00000338745 IFIT2P09913 472 aaKnown RBP20.32■□□□□ 0.84
SATB1-201ENST00000338745 CGNL1Q0VF96 1302 aa20.32■□□□□ 0.84
SATB1-201ENST00000338745 ANKRD20A12PQ8NF67 263 aa20.32■□□□□ 0.84
SATB1-201ENST00000338745 NFXL1Q6ZNB6 911 aa20.31■□□□□ 0.84
SATB1-201ENST00000338745 CCDC144AA2RUR9 1427 aa20.31■□□□□ 0.84
SATB1-201ENST00000338745 IPO7O95373 1038 aaKnown RBP20.31■□□□□ 0.84
SATB1-201ENST00000338745 DDX19BQ9UMR2 479 aa20.31■□□□□ 0.84
SATB1-201ENST00000338745 SMC3Q9UQE7 1217 aa20.31■□□□□ 0.84
SATB1-201ENST00000338745 CHMP4CQ96CF2 233 aa20.31■□□□□ 0.84
SATB1-201ENST00000338745 WASHC2CQ9Y4E1 1318 aa20.3■□□□□ 0.84
SATB1-201ENST00000338745 ZKSCAN1P17029 563 aaPredicted RBP20.3■□□□□ 0.84
SATB1-201ENST00000338745 APAF1O14727 1248 aa20.3■□□□□ 0.84
SATB1-201ENST00000338745 DHX57Q6P158 1386 aaKnown RBP20.3■□□□□ 0.84
SATB1-201ENST00000338745 PRKRIP1Q9H875 184 aaPredicted RBP20.3■□□□□ 0.84
SATB1-201ENST00000338745 COG3Q96JB2 828 aa20.3■□□□□ 0.84
SATB1-201ENST00000338745 NFKBIBQ15653 356 aa20.29■□□□□ 0.84
SATB1-201ENST00000338745 NOM1Q5C9Z4 860 aaKnown RBP20.29■□□□□ 0.84
SATB1-201ENST00000338745 EID1Q9Y6B2 187 aa20.29■□□□□ 0.84
SATB1-201ENST00000338745 INTS3Q68E01 1043 aaKnown RBP20.29■□□□□ 0.84
SATB1-201ENST00000338745 CPLX1O14810 134 aa20.28■□□□□ 0.84
SATB1-201ENST00000338745 KDM4AO75164 1064 aa20.28■□□□□ 0.84
SATB1-201ENST00000338745 NASPP49321 788 aaPredicted RBP20.28■□□□□ 0.84
SATB1-201ENST00000338745 MNS1Q8NEH6 495 aa20.28■□□□□ 0.84
SATB1-201ENST00000338745 RRP12Q5JTH9 1297 aaKnown RBP20.28■□□□□ 0.84
SATB1-201ENST00000338745 TRIM34Q9BYJ4 488 aa20.27■□□□□ 0.84
SATB1-201ENST00000338745 CCDC39Q9UFE4 941 aa20.27■□□□□ 0.84
SATB1-201ENST00000338745 DZIP1LQ8IYY4 767 aaKnown RBP20.27■□□□□ 0.84
SATB1-201ENST00000338745 PDILTQ8N807 584 aa20.27■□□□□ 0.84
SATB1-201ENST00000338745 C22orf23Q9BZE7 217 aa20.27■□□□□ 0.84
SATB1-201ENST00000338745 CCDC47Q96A33 483 aaKnown RBP20.27■□□□□ 0.84
SATB1-201ENST00000338745 AMOTL1Q8IY63 956 aa20.27■□□□□ 0.84
SATB1-201ENST00000338745 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.83
SATB1-201ENST00000338745 EFCAB2Q5VUJ9 269 aa20.26■□□□□ 0.83
SATB1-201ENST00000338745 ARGLU1Q9NWB6 273 aaPredicted RBP20.26■□□□□ 0.83
SATB1-201ENST00000338745 LRRFIP1Q32MZ4 808 aaKnown RBP20.25■□□□□ 0.83
SATB1-201ENST00000338745 TTLL5Q6EMB2 1281 aa20.25■□□□□ 0.83
SATB1-201ENST00000338745 RIPK4P57078 832 aa20.25■□□□□ 0.83
SATB1-201ENST00000338745 NOL10Q9BSC4 688 aaKnown RBP20.25■□□□□ 0.83
SATB1-201ENST00000338745 ROCK1Q13464 1354 aa20.25■□□□□ 0.83
SATB1-201ENST00000338745 LNPKQ9C0E8 428 aa20.24■□□□□ 0.83
SATB1-201ENST00000338745 DHX16O60231 1041 aaKnown RBP20.24■□□□□ 0.83
SATB1-201ENST00000338745 NUCB2P80303 420 aa20.24■□□□□ 0.83
SATB1-201ENST00000338745 CPLX2Q6PUV4 134 aaKnown RBP20.24■□□□□ 0.83
SATB1-201ENST00000338745 SKIDA1Q1XH10 827 aa20.24■□□□□ 0.83
SATB1-201ENST00000338745 CCDC27Q2M243 656 aa20.24■□□□□ 0.83
SATB1-201ENST00000338745 RNF20Q5VTR2 975 aa20.23■□□□□ 0.83
SATB1-201ENST00000338745 EVC2Q86UK5 1308 aa20.23■□□□□ 0.83
SATB1-201ENST00000338745 NEXNQ0ZGT2 675 aa20.23■□□□□ 0.83
SATB1-201ENST00000338745 MAP7D2Q96T17 732 aa20.22■□□□□ 0.83
SATB1-201ENST00000338745 RAPGEF2Q9Y4G8 1499 aa20.22■□□□□ 0.83
SATB1-201ENST00000338745 ERICH2A1L162 156 aa20.22■□□□□ 0.83
SATB1-201ENST00000338745 EVA1CP58658 441 aa20.22■□□□□ 0.83
SATB1-201ENST00000338745 UACAQ9BZF9 1416 aa20.22■□□□□ 0.83
SATB1-201ENST00000338745 CAGE1Q8TC20 777 aa20.22■□□□□ 0.83
SATB1-201ENST00000338745 TRDNQ13061 729 aa20.21■□□□□ 0.83
SATB1-201ENST00000338745 RNF214Q8ND24 703 aa20.21■□□□□ 0.83
SATB1-201ENST00000338745 VPS37DQ86XT2 251 aa20.21■□□□□ 0.83
SATB1-201ENST00000338745 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
SATB1-201ENST00000338745 RBM10P98175 930 aaKnown RBP20.21■□□□□ 0.83
SATB1-201ENST00000338745 PANK1Q8TE04 598 aa20.21■□□□□ 0.83
SATB1-201ENST00000338745 CTDP1Q9Y5B0 961 aaPredicted RBP20.21■□□□□ 0.83
SATB1-201ENST00000338745 ACBD3Q9H3P7 528 aa20.2■□□□□ 0.82
SATB1-201ENST00000338745 OLFM4Q6UX06 510 aa20.2■□□□□ 0.82
SATB1-201ENST00000338745 TTC5Q8N0Z6 440 aa20.2■□□□□ 0.82
SATB1-201ENST00000338745 TEFQ10587 303 aa20.2■□□□□ 0.82
SATB1-201ENST00000338745 MINK1Q8N4C8 1332 aaPredicted RBP20.19■□□□□ 0.82
SATB1-201ENST00000338745 G3BP1Q13283 466 aaKnown RBP eCLIP20.19■□□□□ 0.82
SATB1-201ENST00000338745 CAVIN1Q6NZI2 390 aaKnown RBP20.18■□□□□ 0.82
SATB1-201ENST00000338745 CCDC73Q6ZRK6 1079 aa20.18■□□□□ 0.82
SATB1-201ENST00000338745 EPS15P42566 896 aa20.18■□□□□ 0.82
SATB1-201ENST00000338745 FYB1O15117 783 aa20.18■□□□□ 0.82
SATB1-201ENST00000338745 DIAPH1O60610 1272 aaKnown RBP20.17■□□□□ 0.82
SATB1-201ENST00000338745 NAT10Q9H0A0 1025 aaKnown RBP20.17■□□□□ 0.82
SATB1-201ENST00000338745 HSP90B2PQ58FF3 399 aa20.17■□□□□ 0.82
SATB1-201ENST00000338745 FKBP5Q13451 457 aaPredicted RBP20.17■□□□□ 0.82
SATB1-201ENST00000338745 MRE11P49959 708 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms