RNA–Protein interactions for RNA: ENST00000338581.10

OTOF-202, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-202ENST00000338581 KANK4Q5T7N3 995 aaPredicted RBP17.3■□□□□ 0.36
OTOF-202ENST00000338581 SMC3Q9UQE7 1217 aa17.3■□□□□ 0.36
OTOF-202ENST00000338581 PODXL2Q9NZ53 605 aa17.3■□□□□ 0.36
OTOF-202ENST00000338581 TRAK2O60296 914 aa17.29■□□□□ 0.36
OTOF-202ENST00000338581 MBD3O95983 291 aa17.29■□□□□ 0.36
OTOF-202ENST00000338581 CCDC173Q0VFZ6 552 aa17.29■□□□□ 0.36
OTOF-202ENST00000338581 RNF20Q5VTR2 975 aa17.29■□□□□ 0.36
OTOF-202ENST00000338581 BCL2L13Q9BXK5 485 aa17.29■□□□□ 0.36
OTOF-202ENST00000338581 NAT10Q9H0A0 1025 aaKnown RBP17.29■□□□□ 0.36
OTOF-202ENST00000338581 LETM1O95202 739 aaPredicted RBP17.28■□□□□ 0.36
OTOF-202ENST00000338581 INTS3Q68E01 1043 aaKnown RBP17.28■□□□□ 0.36
OTOF-202ENST00000338581 LEKR1Q6ZMV7 388 aa17.28■□□□□ 0.36
OTOF-202ENST00000338581 BRPF3Q9ULD4 1205 aa17.28■□□□□ 0.36
OTOF-202ENST00000338581 CPLX1O14810 134 aa17.28■□□□□ 0.36
OTOF-202ENST00000338581 VPS37CA5D8V6 355 aaPredicted RBP17.28■□□□□ 0.36
OTOF-202ENST00000338581 ANKRD30AQ9BXX3 1397 aa17.28■□□□□ 0.36
OTOF-202ENST00000338581 RRP9O43818 475 aaKnown RBP17.28■□□□□ 0.36
OTOF-202ENST00000338581 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.36
OTOF-202ENST00000338581 ANO2Q9NQ90 1003 aa17.26■□□□□ 0.35
OTOF-202ENST00000338581 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
OTOF-202ENST00000338581 CSB-PGBD3P0DP91 1061 aa17.26■□□□□ 0.35
OTOF-202ENST00000338581 CCP110O43303 1012 aa17.26■□□□□ 0.35
OTOF-202ENST00000338581 VPS53Q5VIR6 699 aa17.26■□□□□ 0.35
OTOF-202ENST00000338581 TMX4Q9H1E5 349 aaPredicted RBP17.26■□□□□ 0.35
OTOF-202ENST00000338581 DZIP1LQ8IYY4 767 aaKnown RBP17.25■□□□□ 0.35
OTOF-202ENST00000338581 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
OTOF-202ENST00000338581 PAK3O75914 559 aaPredicted RBP17.24■□□□□ 0.35
OTOF-202ENST00000338581 RNF214Q8ND24 703 aa17.23■□□□□ 0.35
OTOF-202ENST00000338581 IL27Q8NEV9 243 aa17.23■□□□□ 0.35
OTOF-202ENST00000338581 PANK3Q9H999 370 aa17.22■□□□□ 0.35
OTOF-202ENST00000338581 ROCK1Q13464 1354 aa17.22■□□□□ 0.35
OTOF-202ENST00000338581 TSPYL1Q9H0U9 437 aa17.22■□□□□ 0.35
OTOF-202ENST00000338581 FRAT2O75474 233 aaPredicted RBP17.22■□□□□ 0.35
OTOF-202ENST00000338581 TRIM5Q9C035 493 aa17.21■□□□□ 0.35
OTOF-202ENST00000338581 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.35
OTOF-202ENST00000338581 SOGA1O94964 1423 aa17.21■□□□□ 0.35
OTOF-202ENST00000338581 RBM10P98175 930 aaKnown RBP17.21■□□□□ 0.35
OTOF-202ENST00000338581 ELL2O00472 640 aaPredicted RBP17.2■□□□□ 0.34
OTOF-202ENST00000338581 NAP1L1P55209 391 aaKnown RBP17.2■□□□□ 0.34
OTOF-202ENST00000338581 OLFM4Q6UX06 510 aa17.2■□□□□ 0.34
OTOF-202ENST00000338581 ST20-MTHFSA0A0A6YYL1 179 aa17.2■□□□□ 0.34
OTOF-202ENST00000338581 TAF3Q5VWG9 929 aa17.2■□□□□ 0.34
OTOF-202ENST00000338581 TSPY26PQ9H489 355 aa17.2■□□□□ 0.34
OTOF-202ENST00000338581 NACADO15069 1562 aa17.19■□□□□ 0.34
OTOF-202ENST00000338581 GGT6Q6P531 493 aa17.19■□□□□ 0.34
OTOF-202ENST00000338581 USP8P40818 1118 aa17.19■□□□□ 0.34
OTOF-202ENST00000338581 CAVIN1Q6NZI2 390 aaKnown RBP17.19■□□□□ 0.34
OTOF-202ENST00000338581 CAGE1Q8TC20 777 aa17.19■□□□□ 0.34
OTOF-202ENST00000338581 MYO6Q9UM54 1294 aa17.19■□□□□ 0.34
OTOF-202ENST00000338581 APAF1O14727 1248 aa17.19■□□□□ 0.34
OTOF-202ENST00000338581 PRKCSHP14314 528 aaPredicted RBP17.19■□□□□ 0.34
OTOF-202ENST00000338581 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
OTOF-202ENST00000338581 TRDNQ13061 729 aa17.19■□□□□ 0.34
OTOF-202ENST00000338581 SDF4Q9BRK5 362 aa17.19■□□□□ 0.34
OTOF-202ENST00000338581 IFIT2P09913 472 aaKnown RBP17.18■□□□□ 0.34
OTOF-202ENST00000338581 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.18■□□□□ 0.34
OTOF-202ENST00000338581 DHX57Q6P158 1386 aaKnown RBP17.18■□□□□ 0.34
OTOF-202ENST00000338581 CDC45O75419 566 aa17.18■□□□□ 0.34
OTOF-202ENST00000338581 AMPHP49418 695 aa17.18■□□□□ 0.34
OTOF-202ENST00000338581 SAFBQ15424 915 aaKnown RBP eCLIP17.18■□□□□ 0.34
OTOF-202ENST00000338581 HSP90AB3PQ58FF7 597 aa17.16■□□□□ 0.34
OTOF-202ENST00000338581 AXDND1Q5T1B0 1012 aaPredicted RBP17.16■□□□□ 0.34
OTOF-202ENST00000338581 PDILTQ8N807 584 aa17.16■□□□□ 0.34
OTOF-202ENST00000338581 MCM2P49736 904 aa17.15■□□□□ 0.34
OTOF-202ENST00000338581 KIAA0754O94854 1291 aa17.15■□□□□ 0.34
OTOF-202ENST00000338581 CCDC112Q8NEF3 446 aa17.15■□□□□ 0.34
OTOF-202ENST00000338581 HSP90AB4PQ58FF6 505 aa17.15■□□□□ 0.34
OTOF-202ENST00000338581 FBXW7Q969H0 707 aa17.15■□□□□ 0.34
OTOF-202ENST00000338581 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
OTOF-202ENST00000338581 LNPKQ9C0E8 428 aa17.14■□□□□ 0.33
OTOF-202ENST00000338581 OFD1O75665 1012 aa17.14■□□□□ 0.33
OTOF-202ENST00000338581 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
OTOF-202ENST00000338581 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
OTOF-202ENST00000338581 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.13■□□□□ 0.33
OTOF-202ENST00000338581 GOLGA6L7A0A1B0GV03 622 aa17.13■□□□□ 0.33
OTOF-202ENST00000338581 CT47A1Q5JQC4 288 aaPredicted RBP17.13■□□□□ 0.33
OTOF-202ENST00000338581 ERC2O15083 957 aa17.13■□□□□ 0.33
OTOF-202ENST00000338581 C9orf78Q9NZ63 289 aaPredicted RBP17.12■□□□□ 0.33
OTOF-202ENST00000338581 CUX2O14529 1486 aa17.12■□□□□ 0.33
OTOF-202ENST00000338581 ESPNB1AK53 854 aa17.12■□□□□ 0.33
OTOF-202ENST00000338581 SMARCE1Q969G3 411 aa17.12■□□□□ 0.33
OTOF-202ENST00000338581 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
OTOF-202ENST00000338581 PDCP20941 246 aa17.12■□□□□ 0.33
OTOF-202ENST00000338581 DEF6Q9H4E7 631 aa17.12■□□□□ 0.33
OTOF-202ENST00000338581 G3V3G9 751 aa17.12■□□□□ 0.33
OTOF-202ENST00000338581 KINO60870 393 aaKnown RBP17.12■□□□□ 0.33
OTOF-202ENST00000338581 EIF3JO75822 258 aaKnown RBP17.12■□□□□ 0.33
OTOF-202ENST00000338581 DCAF8Q5TAQ9 597 aa17.12■□□□□ 0.33
OTOF-202ENST00000338581 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
OTOF-202ENST00000338581 PDCL2Q8N4E4 241 aa17.11■□□□□ 0.33
OTOF-202ENST00000338581 BCL11BQ9C0K0 894 aaPredicted RBP17.11■□□□□ 0.33
OTOF-202ENST00000338581 ERLIN1O75477 346 aa17.11■□□□□ 0.33
OTOF-202ENST00000338581 GRPEL1Q9HAV7 217 aa17.11■□□□□ 0.33
OTOF-202ENST00000338581 UQCRHLA0A096LP55 91 aa17.11■□□□□ 0.33
OTOF-202ENST00000338581 UQCRHP07919 91 aa17.11■□□□□ 0.33
OTOF-202ENST00000338581 PRPF40AO75400 957 aaKnown RBP17.11■□□□□ 0.33
OTOF-202ENST00000338581 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
OTOF-202ENST00000338581 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
OTOF-202ENST00000338581 GTF2E1P29083 439 aaPredicted RBP17.1■□□□□ 0.33
OTOF-202ENST00000338581 RABEP1Q15276 862 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms