RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 PPP2R1AP30153 589 aa19.56■□□□□ 0.72
HDAC5-202ENST00000336057 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
HDAC5-202ENST00000336057 AAMPQ13685 434 aa19.55■□□□□ 0.72
HDAC5-202ENST00000336057 PCF11O94913 1555 aaKnown RBP19.55■□□□□ 0.72
HDAC5-202ENST00000336057 KIAA2012Q0VF49 1180 aa19.54■□□□□ 0.72
HDAC5-202ENST00000336057 ARHGAP5Q13017 1502 aa19.54■□□□□ 0.72
HDAC5-202ENST00000336057 GPATCH3Q96I76 525 aa19.53■□□□□ 0.72
HDAC5-202ENST00000336057 SMG6Q86US8 1419 aaKnown RBP19.53■□□□□ 0.72
HDAC5-202ENST00000336057 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.53■□□□□ 0.72
HDAC5-202ENST00000336057 PANK1Q8TE04 598 aa19.52■□□□□ 0.72
HDAC5-202ENST00000336057 NOL8Q76FK4 1167 aaKnown RBP19.51■□□□□ 0.71
HDAC5-202ENST00000336057 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
HDAC5-202ENST00000336057 AFAP1Q8N556 730 aa19.5■□□□□ 0.71
HDAC5-202ENST00000336057 ROCK1Q13464 1354 aa19.5■□□□□ 0.71
HDAC5-202ENST00000336057 CFAP70Q5T0N1 1121 aa19.5■□□□□ 0.71
HDAC5-202ENST00000336057 EPRSP07814 1512 aaKnown RBP19.5■□□□□ 0.71
HDAC5-202ENST00000336057 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
HDAC5-202ENST00000336057 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
HDAC5-202ENST00000336057 LTV1Q96GA3 475 aaPredicted RBP19.49■□□□□ 0.71
HDAC5-202ENST00000336057 KIF16BQ96L93 1317 aa19.49■□□□□ 0.71
HDAC5-202ENST00000336057 HTATSF1O43719 755 aaKnown RBP19.49■□□□□ 0.71
HDAC5-202ENST00000336057 API5Q9BZZ5 524 aaKnown RBP19.49■□□□□ 0.71
HDAC5-202ENST00000336057 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
HDAC5-202ENST00000336057 CSB-PGBD3P0DP91 1061 aa19.49■□□□□ 0.71
HDAC5-202ENST00000336057 SKOR2Q2VWA4 1001 aaPredicted RBP19.49■□□□□ 0.71
HDAC5-202ENST00000336057 MRC2Q9UBG0 1479 aa19.49■□□□□ 0.71
HDAC5-202ENST00000336057 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
HDAC5-202ENST00000336057 DDX49Q9Y6V7 483 aaKnown RBP19.47■□□□□ 0.71
HDAC5-202ENST00000336057 TCP11L2Q8N4U5 519 aa19.47■□□□□ 0.71
HDAC5-202ENST00000336057 CHMP5Q9NZZ3 219 aa19.47■□□□□ 0.71
HDAC5-202ENST00000336057 MTHFSP49914 203 aa19.47■□□□□ 0.71
HDAC5-202ENST00000336057 TMEM132EQ6IEE7 984 aa19.46■□□□□ 0.71
HDAC5-202ENST00000336057 CDK13Q14004 1512 aaKnown RBP19.46■□□□□ 0.71
HDAC5-202ENST00000336057 NFKBIBQ15653 356 aa19.46■□□□□ 0.71
HDAC5-202ENST00000336057 GGNBP2Q9H3C7 697 aa19.46■□□□□ 0.71
HDAC5-202ENST00000336057 CSPP1Q1MSJ5 1256 aa19.45■□□□□ 0.7
HDAC5-202ENST00000336057 RILPL2Q969X0 211 aa19.44■□□□□ 0.7
HDAC5-202ENST00000336057 GNL2Q13823 731 aaKnown RBP19.44■□□□□ 0.7
HDAC5-202ENST00000336057 GNAI1P63096 354 aa19.43■□□□□ 0.7
HDAC5-202ENST00000336057 FOXD4L5Q5VV16 416 aaPredicted RBP19.43■□□□□ 0.7
HDAC5-202ENST00000336057 FOXD4L4Q8WXT5 416 aaPredicted RBP19.43■□□□□ 0.7
HDAC5-202ENST00000336057 ANKRD30BQ9BXX2 1392 aa19.43■□□□□ 0.7
HDAC5-202ENST00000336057 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
HDAC5-202ENST00000336057 CABP2Q9NPB3 220 aa19.43■□□□□ 0.7
HDAC5-202ENST00000336057 NPHP1O15259 732 aa19.43■□□□□ 0.7
HDAC5-202ENST00000336057 PHF14O94880 888 aa19.42■□□□□ 0.7
HDAC5-202ENST00000336057 REC8O95072 547 aa19.42■□□□□ 0.7
HDAC5-202ENST00000336057 C22orf23Q9BZE7 217 aa19.42■□□□□ 0.7
HDAC5-202ENST00000336057 LNPKQ9C0E8 428 aa19.42■□□□□ 0.7
HDAC5-202ENST00000336057 C11orf95C9JLR9 678 aaPredicted RBP19.42■□□□□ 0.7
HDAC5-202ENST00000336057 PDE3AQ14432 1141 aa19.42■□□□□ 0.7
HDAC5-202ENST00000336057 PTPN23Q9H3S7 1636 aa19.41■□□□□ 0.7
HDAC5-202ENST00000336057 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
HDAC5-202ENST00000336057 ERBINQ96RT1 1412 aa19.41■□□□□ 0.7
HDAC5-202ENST00000336057 BACH2Q9BYV9 841 aa19.41■□□□□ 0.7
HDAC5-202ENST00000336057 CHMP3Q9Y3E7 222 aa19.4■□□□□ 0.7
HDAC5-202ENST00000336057 ZNF330Q9Y3S2 320 aaPredicted RBP19.4■□□□□ 0.7
HDAC5-202ENST00000336057 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
HDAC5-202ENST00000336057 SCAPERQ9BY12 1400 aa19.4■□□□□ 0.7
HDAC5-202ENST00000336057 KIAA0586Q9BVV6 1533 aa19.39■□□□□ 0.69
HDAC5-202ENST00000336057 CUL7Q14999 1698 aa19.39■□□□□ 0.69
HDAC5-202ENST00000336057 HSP90B1P14625 803 aaKnown RBP19.39■□□□□ 0.69
HDAC5-202ENST00000336057 GORABQ5T7V8 394 aa19.39■□□□□ 0.69
HDAC5-202ENST00000336057 HMOX1P09601 288 aa19.38■□□□□ 0.69
HDAC5-202ENST00000336057 OSCARQ8IYS5 282 aa19.38■□□□□ 0.69
HDAC5-202ENST00000336057 RSPH6AQ9H0K4 717 aa19.37■□□□□ 0.69
HDAC5-202ENST00000336057 BIVM-ERCC5R4GMW8 1640 aa19.37■□□□□ 0.69
HDAC5-202ENST00000336057 IQGAP2Q13576 1575 aa19.37■□□□□ 0.69
HDAC5-202ENST00000336057 BCAR3O75815 825 aa19.36■□□□□ 0.69
HDAC5-202ENST00000336057 ABCC5O15440 1437 aa19.35■□□□□ 0.69
HDAC5-202ENST00000336057 SLC12A5Q9H2X9 1139 aa19.34■□□□□ 0.69
HDAC5-202ENST00000336057 ATP6V1DQ9Y5K8 247 aa19.34■□□□□ 0.69
HDAC5-202ENST00000336057 TEFQ10587 303 aa19.34■□□□□ 0.69
HDAC5-202ENST00000336057 PDZRN3Q9UPQ7 1066 aa19.33■□□□□ 0.69
HDAC5-202ENST00000336057 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.33■□□□□ 0.69
HDAC5-202ENST00000336057 INTS3Q68E01 1043 aaKnown RBP19.33■□□□□ 0.68
HDAC5-202ENST00000336057 EXOSC9Q06265 439 aaKnown RBP19.33■□□□□ 0.68
HDAC5-202ENST00000336057 CYB5RLQ6IPT4 315 aa19.32■□□□□ 0.68
HDAC5-202ENST00000336057 NCOA1Q15788 1441 aa19.32■□□□□ 0.68
HDAC5-202ENST00000336057 TAF7LQ5H9L4 462 aa19.31■□□□□ 0.68
HDAC5-202ENST00000336057 FKBP5Q13451 457 aaPredicted RBP19.31■□□□□ 0.68
HDAC5-202ENST00000336057 DIAPH3Q9NSV4 1193 aa19.31■□□□□ 0.68
HDAC5-202ENST00000336057 C1orf141Q5JVX7 400 aa19.3■□□□□ 0.68
HDAC5-202ENST00000336057 KIF3AQ9Y496 699 aa19.3■□□□□ 0.68
HDAC5-202ENST00000336057 FOXD4L6Q3SYB3 417 aaPredicted RBP19.3■□□□□ 0.68
HDAC5-202ENST00000336057 FOXD4L3Q6VB84 417 aaPredicted RBP19.3■□□□□ 0.68
HDAC5-202ENST00000336057 CAMSAP2Q08AD1 1489 aa19.3■□□□□ 0.68
HDAC5-202ENST00000336057 EIF2S2P20042 333 aaKnown RBP19.3■□□□□ 0.68
HDAC5-202ENST00000336057 NINLQ9Y2I6 1382 aa19.3■□□□□ 0.68
HDAC5-202ENST00000336057 NUCB2P80303 420 aa19.29■□□□□ 0.68
HDAC5-202ENST00000336057 TPM4P67936 248 aa19.29■□□□□ 0.68
HDAC5-202ENST00000336057 ARID3AQ99856 593 aa19.29■□□□□ 0.68
HDAC5-202ENST00000336057 CDC45O75419 566 aa19.29■□□□□ 0.68
HDAC5-202ENST00000336057 NECTIN2Q92692 538 aa19.29■□□□□ 0.68
HDAC5-202ENST00000336057 WDR63Q8IWG1 891 aa19.28■□□□□ 0.68
HDAC5-202ENST00000336057 RUFY2Q8WXA3 655 aa19.28■□□□□ 0.68
HDAC5-202ENST00000336057 ANO2Q9NQ90 1003 aa19.28■□□□□ 0.68
HDAC5-202ENST00000336057 TSPYL4Q9UJ04 414 aa19.28■□□□□ 0.68
HDAC5-202ENST00000336057 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.68
HDAC5-202ENST00000336057 PRKAR2BP31323 418 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms