RNA–Protein interactions for RNA: ENST00000333229.6

BRWD1-201, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD1, Length 10,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-201ENST00000333229 AKAP17AQ02040 695 aaKnown RBP16.15■□□□□ 0.18
BRWD1-201ENST00000333229 HMGB1P09429 215 aaKnown RBP16.15■□□□□ 0.18
BRWD1-201ENST00000333229 NF2P35240 595 aa16.15■□□□□ 0.18
BRWD1-201ENST00000333229 GPATCH11Q8N954 259 aa16.14■□□□□ 0.17
BRWD1-201ENST00000333229 NAT10Q9H0A0 1025 aaKnown RBP16.14■□□□□ 0.17
BRWD1-201ENST00000333229 SEPT11Q9NVA2 429 aaKnown RBP16.14■□□□□ 0.17
BRWD1-201ENST00000333229 RCAN3Q9UKA8 241 aa16.14■□□□□ 0.17
BRWD1-201ENST00000333229 CCER2I3L3R5 266 aa16.14■□□□□ 0.17
BRWD1-201ENST00000333229 CENPHQ9H3R5 247 aa16.14■□□□□ 0.17
BRWD1-201ENST00000333229 ZNF526Q8TF50 670 aaPredicted RBP16.13■□□□□ 0.17
BRWD1-201ENST00000333229 CLGNO14967 610 aa16.13■□□□□ 0.17
BRWD1-201ENST00000333229 GGT6Q6P531 493 aa16.13■□□□□ 0.17
BRWD1-201ENST00000333229 FANCIQ9NVI1 1328 aa16.13■□□□□ 0.17
BRWD1-201ENST00000333229 CCDC47Q96A33 483 aaKnown RBP16.13■□□□□ 0.17
BRWD1-201ENST00000333229 CCDC146Q8IYE0 955 aa16.12■□□□□ 0.17
BRWD1-201ENST00000333229 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.12■□□□□ 0.17
BRWD1-201ENST00000333229 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
BRWD1-201ENST00000333229 RABEP1Q15276 862 aa16.11■□□□□ 0.17
BRWD1-201ENST00000333229 SEPT7Q16181 437 aaKnown RBP16.11■□□□□ 0.17
BRWD1-201ENST00000333229 FAM184AQ8NB25 1140 aa16.11■□□□□ 0.17
BRWD1-201ENST00000333229 MRE11P49959 708 aa16.1■□□□□ 0.17
BRWD1-201ENST00000333229 FOXD1Q16676 465 aa16.1■□□□□ 0.17
BRWD1-201ENST00000333229 SASS6Q6UVJ0 657 aa16.1■□□□□ 0.17
BRWD1-201ENST00000333229 ERICH4A6NGS2 130 aa16.09■□□□□ 0.17
BRWD1-201ENST00000333229 IRX3P78415 501 aaPredicted RBP16.09■□□□□ 0.17
BRWD1-201ENST00000333229 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.09■□□□□ 0.176e-7■■■■□ 23.3
BRWD1-201ENST00000333229 CLUAP1Q96AJ1 413 aa16.09■□□□□ 0.17
BRWD1-201ENST00000333229 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
BRWD1-201ENST00000333229 TICAM2Q86XR7 235 aa16.09■□□□□ 0.17
BRWD1-201ENST00000333229 ERLIN1O75477 346 aa16.09■□□□□ 0.17
BRWD1-201ENST00000333229 SKIDA1Q1XH10 827 aa16.09■□□□□ 0.17
BRWD1-201ENST00000333229 RBM10P98175 930 aaKnown RBP16.09■□□□□ 0.17
BRWD1-201ENST00000333229 CFAP57Q96MR6 1250 aa16.09■□□□□ 0.17
BRWD1-201ENST00000333229 SLC26A8Q96RN1 970 aa16.09■□□□□ 0.17
BRWD1-201ENST00000333229 CAVIN1Q6NZI2 390 aaKnown RBP16.08■□□□□ 0.17
BRWD1-201ENST00000333229 EIF3AQ14152 1382 aaKnown RBP16.08■□□□□ 0.17
BRWD1-201ENST00000333229 RBM25P49756 843 aaKnown RBP16.08■□□□□ 0.17
BRWD1-201ENST00000333229 NOL10Q9BSC4 688 aaKnown RBP16.08■□□□□ 0.17
BRWD1-201ENST00000333229 CALCOCO1Q9P1Z2 691 aa16.08■□□□□ 0.17
BRWD1-201ENST00000333229 FAM107BQ9H098 131 aa16.08■□□□□ 0.16
BRWD1-201ENST00000333229 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.16
BRWD1-201ENST00000333229 KLHL34Q8N239 644 aa16.08■□□□□ 0.16
BRWD1-201ENST00000333229 RILPL2Q969X0 211 aa16.08■□□□□ 0.16
BRWD1-201ENST00000333229 SSR1P43307 286 aaKnown RBP16.07■□□□□ 0.16
BRWD1-201ENST00000333229 KIF27Q86VH2 1401 aa16.07■□□□□ 0.16
BRWD1-201ENST00000333229 DHX16O60231 1041 aaKnown RBP16.07■□□□□ 0.16
BRWD1-201ENST00000333229 RNF20Q5VTR2 975 aa16.06■□□□□ 0.16
BRWD1-201ENST00000333229 CEP63Q96MT8 703 aa16.06■□□□□ 0.16
BRWD1-201ENST00000333229 HSPA5P11021 654 aaKnown RBP16.06■□□□□ 0.16
BRWD1-201ENST00000333229 AMPHP49418 695 aa16.06■□□□□ 0.16
BRWD1-201ENST00000333229 FOSBP53539 338 aa16.06■□□□□ 0.16
BRWD1-201ENST00000333229 NGDNQ8NEJ9 315 aaKnown RBP16.06■□□□□ 0.16
BRWD1-201ENST00000333229 FAM161AQ3B820 660 aa16.06■□□□□ 0.16
BRWD1-201ENST00000333229 RBM33Q96EV2 1170 aaKnown RBP16.06■□□□□ 0.16
BRWD1-201ENST00000333229 HDAC5Q9UQL6 1122 aa16.06■□□□□ 0.16
BRWD1-201ENST00000333229 EEA1Q15075 1411 aa16.05■□□□□ 0.16
BRWD1-201ENST00000333229 DHX8Q14562 1220 aaKnown RBP16.05■□□□□ 0.16
BRWD1-201ENST00000333229 CCDC43Q96MW1 224 aaKnown RBP16.05■□□□□ 0.16
BRWD1-201ENST00000333229 SETSIPP0DME0 302 aa16.04■□□□□ 0.16
BRWD1-201ENST00000333229 NUTM2FA1L443 756 aa16.04■□□□□ 0.16
BRWD1-201ENST00000333229 IQCEQ6IPM2 695 aa16.04■□□□□ 0.16
BRWD1-201ENST00000333229 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
BRWD1-201ENST00000333229 EPS15P42566 896 aa16.04■□□□□ 0.16
BRWD1-201ENST00000333229 SEPT6Q14141 434 aa16.04■□□□□ 0.16
BRWD1-201ENST00000333229 CGNL1Q0VF96 1302 aa16.03■□□□□ 0.16
BRWD1-201ENST00000333229 BICD2Q8TD16 824 aa16.03■□□□□ 0.16
BRWD1-201ENST00000333229 UQCRHLA0A096LP55 91 aa16.03■□□□□ 0.16
BRWD1-201ENST00000333229 UQCRHP07919 91 aa16.03■□□□□ 0.16
BRWD1-201ENST00000333229 CHMP4AQ9BY43 222 aa16.03■□□□□ 0.16
BRWD1-201ENST00000333229 LRRCC1Q9C099 1032 aa16.03■□□□□ 0.16
BRWD1-201ENST00000333229 BCL11BQ9C0K0 894 aaPredicted RBP16.03■□□□□ 0.16
BRWD1-201ENST00000333229 SYNE3Q6ZMZ3 975 aa16.03■□□□□ 0.16
BRWD1-201ENST00000333229 AMOTL1Q8IY63 956 aa16.03■□□□□ 0.16
BRWD1-201ENST00000333229 NGEFQ8N5V2 710 aa16.02■□□□□ 0.16
BRWD1-201ENST00000333229 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.16
BRWD1-201ENST00000333229 UBE2Q2Q8WVN8 375 aa16.02■□□□□ 0.16
BRWD1-201ENST00000333229 GBP2P32456 591 aaPredicted RBP16.02■□□□□ 0.15
BRWD1-201ENST00000333229 ANKRD62A6NC57 917 aa16.02■□□□□ 0.15
BRWD1-201ENST00000333229 GOLGA6L10A0A0M3HER8 536 aa16.01■□□□□ 0.15
BRWD1-201ENST00000333229 LETM1O95202 739 aaPredicted RBP16.01■□□□□ 0.15
BRWD1-201ENST00000333229 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
BRWD1-201ENST00000333229 CCDC175P0C221 793 aa16.01■□□□□ 0.15
BRWD1-201ENST00000333229 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
BRWD1-201ENST00000333229 TNNT1P13805 278 aa16.01■□□□□ 0.15
BRWD1-201ENST00000333229 PKD2Q13563 968 aa16.01■□□□□ 0.15
BRWD1-201ENST00000333229 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
BRWD1-201ENST00000333229 PPM1EQ8WY54 764 aa16.01■□□□□ 0.15
BRWD1-201ENST00000333229 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
BRWD1-201ENST00000333229 VPS37DQ86XT2 251 aa16.01■□□□□ 0.15
BRWD1-201ENST00000333229 CENPJQ9HC77 1338 aaPredicted RBP16.01■□□□□ 0.15
BRWD1-201ENST00000333229 PDCL2Q8N4E4 241 aa16■□□□□ 0.15
BRWD1-201ENST00000333229 TRIM29Q14134 588 aa16■□□□□ 0.15
BRWD1-201ENST00000333229 SMARCE1Q969G3 411 aa16■□□□□ 0.15
BRWD1-201ENST00000333229 ARHGAP35Q9NRY4 1499 aa16■□□□□ 0.15
BRWD1-201ENST00000333229 PDILTQ8N807 584 aa16■□□□□ 0.15
BRWD1-201ENST00000333229 RRP7AQ9Y3A4 280 aaKnown RBP15.99■□□□□ 0.15
BRWD1-201ENST00000333229 WDR66Q8TBY9 1149 aa15.99■□□□□ 0.15
BRWD1-201ENST00000333229 TMCO5BA8MYB1 307 aa15.99■□□□□ 0.15
BRWD1-201ENST00000333229 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
BRWD1-201ENST00000333229 OFD1O75665 1012 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms