RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 ATP7AQ04656 1500 aa17.82■□□□□ 0.44
TUBA1B-201ENST00000332858 DEPDC5O75140 1603 aa17.82■□□□□ 0.44
TUBA1B-201ENST00000332858 ADGRF5Q8IZF2 1346 aa17.81■□□□□ 0.44
TUBA1B-201ENST00000332858 ARAP3Q8WWN8 1544 aa17.8■□□□□ 0.44
TUBA1B-201ENST00000332858 SKAP1Q86WV1 359 aa17.8■□□□□ 0.44
TUBA1B-201ENST00000332858 PLEKHH1Q9ULM0 1364 aa17.8■□□□□ 0.44
TUBA1B-201ENST00000332858 TET3O43151 1660 aa17.79■□□□□ 0.44
TUBA1B-201ENST00000332858 ADGRL1O94910 1474 aa17.79■□□□□ 0.44
TUBA1B-201ENST00000332858 C20orf194Q5TEA3 1177 aa17.79■□□□□ 0.44
TUBA1B-201ENST00000332858 KANK1Q14678 1352 aa17.79■□□□□ 0.44
TUBA1B-201ENST00000332858 INO80Q9ULG1 1556 aaPredicted RBP17.79■□□□□ 0.44
TUBA1B-201ENST00000332858 ABCA9Q8IUA7 1624 aa17.78■□□□□ 0.44
TUBA1B-201ENST00000332858 VWDEQ8N2E2 1590 aa17.78■□□□□ 0.44
TUBA1B-201ENST00000332858 CRBNQ96SW2 442 aa17.77■□□□□ 0.44
TUBA1B-201ENST00000332858 NOP58Q9Y2X3 529 aaKnown RBP17.77■□□□□ 0.44
TUBA1B-201ENST00000332858 INSRP06213 1382 aa17.77■□□□□ 0.44
TUBA1B-201ENST00000332858 ZMYM4Q5VZL5 1548 aa17.77■□□□□ 0.43
TUBA1B-201ENST00000332858 WDR43Q15061 677 aaKnown RBP eCLIP17.76■□□□□ 0.43
TUBA1B-201ENST00000332858 MROH1Q8NDA8 1641 aa17.76■□□□□ 0.43
TUBA1B-201ENST00000332858 CDCA8Q53HL2 280 aa17.76■□□□□ 0.43
TUBA1B-201ENST00000332858 CCDC146Q8IYE0 955 aa17.75■□□□□ 0.43
TUBA1B-201ENST00000332858 STAC3Q96MF2 364 aa17.75■□□□□ 0.43
TUBA1B-201ENST00000332858 ASXL2Q76L83 1435 aa17.74■□□□□ 0.43
TUBA1B-201ENST00000332858 MYOM1P52179 1685 aa17.74■□□□□ 0.43
TUBA1B-201ENST00000332858 SYNMO15061 1565 aa17.74■□□□□ 0.43
TUBA1B-201ENST00000332858 DUSP27Q5VZP5 1158 aa17.74■□□□□ 0.43
TUBA1B-201ENST00000332858 CARD14Q9BXL6 1004 aa17.74■□□□□ 0.43
TUBA1B-201ENST00000332858 ASXL1Q8IXJ9 1541 aa17.73■□□□□ 0.43
TUBA1B-201ENST00000332858 KCNA4P22459 653 aa17.73■□□□□ 0.43
TUBA1B-201ENST00000332858 IPO9Q96P70 1041 aaKnown RBP17.72■□□□□ 0.43
TUBA1B-201ENST00000332858 ZNF521Q96K83 1311 aa17.72■□□□□ 0.43
TUBA1B-201ENST00000332858 CHGAP10645 457 aaKnown RBP17.71■□□□□ 0.43
TUBA1B-201ENST00000332858 ANP32AP39687 249 aaKnown RBP17.71■□□□□ 0.43
TUBA1B-201ENST00000332858 ARXQ96QS3 562 aa17.71■□□□□ 0.43
TUBA1B-201ENST00000332858 CFAP65Q6ZU64 1925 aaKnown RBP17.71■□□□□ 0.43
TUBA1B-201ENST00000332858 ERVK-7P63135 1459 aa17.71■□□□□ 0.43
TUBA1B-201ENST00000332858 EIF3AQ14152 1382 aaKnown RBP17.71■□□□□ 0.43
TUBA1B-201ENST00000332858 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.42
TUBA1B-201ENST00000332858 NPM2Q86SE8 214 aaKnown RBP17.7■□□□□ 0.42
TUBA1B-201ENST00000332858 ABCA6Q8N139 1617 aa17.7■□□□□ 0.42
TUBA1B-201ENST00000332858 PDE4AP27815 886 aa17.69■□□□□ 0.42
TUBA1B-201ENST00000332858 MAP3K4Q9Y6R4 1608 aa17.69■□□□□ 0.42
TUBA1B-201ENST00000332858 KIDINS220Q9ULH0 1771 aa17.69■□□□□ 0.42
TUBA1B-201ENST00000332858 TCERG1O14776 1098 aaKnown RBP17.69■□□□□ 0.42
TUBA1B-201ENST00000332858 NBR1Q14596 966 aa17.69■□□□□ 0.42
TUBA1B-201ENST00000332858 GOLGA2Q08379 1002 aa17.68■□□□□ 0.42
TUBA1B-201ENST00000332858 APAF1O14727 1248 aa17.68■□□□□ 0.42
TUBA1B-201ENST00000332858 MROH2AA6NES4 1674 aa17.67■□□□□ 0.42
TUBA1B-201ENST00000332858 PPRC1Q5VV67 1664 aaKnown RBP17.67■□□□□ 0.42
TUBA1B-201ENST00000332858 PIK3C2GO75747 1445 aa17.67■□□□□ 0.42
TUBA1B-201ENST00000332858 GGT6Q6P531 493 aa17.67■□□□□ 0.42
TUBA1B-201ENST00000332858 EFCAB6Q5THR3 1501 aa17.67■□□□□ 0.42
TUBA1B-201ENST00000332858 KDM5AP29375 1690 aaKnown RBP17.67■□□□□ 0.42
TUBA1B-201ENST00000332858 KIAA1210Q9ULL0 1709 aa17.66■□□□□ 0.42
TUBA1B-201ENST00000332858 TRAK1Q9UPV9 953 aa17.66■□□□□ 0.42
TUBA1B-201ENST00000332858 NOS1P29475 1434 aa17.66■□□□□ 0.42
TUBA1B-201ENST00000332858 BACH2Q9BYV9 841 aa17.66■□□□□ 0.42
TUBA1B-201ENST00000332858 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
TUBA1B-201ENST00000332858 MYOM2P54296 1465 aa17.65■□□□□ 0.42
TUBA1B-201ENST00000332858 NPC1L1Q9UHC9 1359 aa17.65■□□□□ 0.42
TUBA1B-201ENST00000332858 KIF1BO60333 1816 aa17.65■□□□□ 0.42
TUBA1B-201ENST00000332858 SLFN5Q08AF3 891 aa17.65■□□□□ 0.42
TUBA1B-201ENST00000332858 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
TUBA1B-201ENST00000332858 ZBTB47Q9UFB7 747 aaPredicted RBP17.64■□□□□ 0.41
TUBA1B-201ENST00000332858 NUTM2DQ5VT03 806 aaPredicted RBP17.63■□□□□ 0.41
TUBA1B-201ENST00000332858 NEURL4Q96JN8 1562 aa17.62■□□□□ 0.41
TUBA1B-201ENST00000332858 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
TUBA1B-201ENST00000332858 SLC12A5Q9H2X9 1139 aa17.62■□□□□ 0.41
TUBA1B-201ENST00000332858 IFT172Q9UG01 1749 aa17.62■□□□□ 0.41
TUBA1B-201ENST00000332858 NPATQ14207 1427 aa17.61■□□□□ 0.41
TUBA1B-201ENST00000332858 TRMT2AQ8IZ69 625 aaKnown RBP17.61■□□□□ 0.41
TUBA1B-201ENST00000332858 ZNF518AQ6AHZ1 1483 aa17.61■□□□□ 0.41
TUBA1B-201ENST00000332858 NRXN1Q9ULB1 1477 aa17.61■□□□□ 0.41
TUBA1B-201ENST00000332858 CENPJQ9HC77 1338 aaPredicted RBP17.61■□□□□ 0.41
TUBA1B-201ENST00000332858 BCAR3O75815 825 aa17.6■□□□□ 0.41
TUBA1B-201ENST00000332858 MS4A1P11836 297 aa17.6■□□□□ 0.41
TUBA1B-201ENST00000332858 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
TUBA1B-201ENST00000332858 KDM2BQ8NHM5 1336 aa17.59■□□□□ 0.41
TUBA1B-201ENST00000332858 CD109Q6YHK3 1445 aa17.58■□□□□ 0.4
TUBA1B-201ENST00000332858 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.4
TUBA1B-201ENST00000332858 C14orf93Q9H972 538 aaKnown RBP17.58■□□□□ 0.4
TUBA1B-201ENST00000332858 FRMPD1Q5SYB0 1578 aa17.57■□□□□ 0.4
TUBA1B-201ENST00000332858 ADGRB3O60242 1522 aa17.57■□□□□ 0.4
TUBA1B-201ENST00000332858 LMTK2Q8IWU2 1503 aa17.57■□□□□ 0.4
TUBA1B-201ENST00000332858 RAPGEF3O95398 923 aa17.57■□□□□ 0.4
TUBA1B-201ENST00000332858 NSD3Q9BZ95 1437 aa17.55■□□□□ 0.4
TUBA1B-201ENST00000332858 SBNO2Q9Y2G9 1366 aa17.55■□□□□ 0.4
TUBA1B-201ENST00000332858 POGZQ7Z3K3 1410 aa17.54■□□□□ 0.4
TUBA1B-201ENST00000332858 DEKP35659 375 aaKnown RBP17.54■□□□□ 0.4
TUBA1B-201ENST00000332858 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
TUBA1B-201ENST00000332858 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
TUBA1B-201ENST00000332858 MORC1Q86VD1 984 aa17.53■□□□□ 0.4
TUBA1B-201ENST00000332858 MYO3AQ8NEV4 1616 aa17.53■□□□□ 0.4
TUBA1B-201ENST00000332858 NKTRP30414 1462 aaKnown RBP17.52■□□□□ 0.4
TUBA1B-201ENST00000332858 ADGRB1O14514 1584 aa17.52■□□□□ 0.4
TUBA1B-201ENST00000332858 WWC1Q8IX03 1113 aa17.52■□□□□ 0.39
TUBA1B-201ENST00000332858 E9PSI1 815 aa17.51■□□□□ 0.39
TUBA1B-201ENST00000332858 PPLO60437 1756 aa17.51■□□□□ 0.39
TUBA1B-201ENST00000332858 POLR3AO14802 1390 aaPredicted RBP17.51■□□□□ 0.39
TUBA1B-201ENST00000332858 CENPQQ7L2Z9 268 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms