RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 BLMP54132 1417 aaPredicted RBP18.45■□□□□ 0.54
ATP2C1-201ENST00000328560 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
ATP2C1-201ENST00000328560 ADGRF5Q8IZF2 1346 aa18.45■□□□□ 0.54
ATP2C1-201ENST00000328560 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
ATP2C1-201ENST00000328560 GGT6Q6P531 493 aa18.45■□□□□ 0.54
ATP2C1-201ENST00000328560 PLEKHH1Q9ULM0 1364 aa18.45■□□□□ 0.54
ATP2C1-201ENST00000328560 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
ATP2C1-201ENST00000328560 RTEL1-TNFRSF6BF6WH68 1400 aa18.44■□□□□ 0.54
ATP2C1-201ENST00000328560 APAF1O14727 1248 aa18.44■□□□□ 0.54
ATP2C1-201ENST00000328560 DEKP35659 375 aaKnown RBP18.44■□□□□ 0.54
ATP2C1-201ENST00000328560 SCAF11Q99590 1463 aaKnown RBP18.44■□□□□ 0.54
ATP2C1-201ENST00000328560 ADGRL1O94910 1474 aa18.43■□□□□ 0.54
ATP2C1-201ENST00000328560 DUSP27Q5VZP5 1158 aa18.42■□□□□ 0.54
ATP2C1-201ENST00000328560 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
ATP2C1-201ENST00000328560 EIF3AQ14152 1382 aaKnown RBP18.41■□□□□ 0.54
ATP2C1-201ENST00000328560 LAS1LQ9Y4W2 734 aaKnown RBP18.4■□□□□ 0.54
ATP2C1-201ENST00000328560 BACH2Q9BYV9 841 aa18.4■□□□□ 0.54
ATP2C1-201ENST00000328560 TRAK1Q9UPV9 953 aa18.4■□□□□ 0.54
ATP2C1-201ENST00000328560 LAMC1P11047 1609 aa18.4■□□□□ 0.54
ATP2C1-201ENST00000328560 NEUROD2Q15784 382 aa18.39■□□□□ 0.53
ATP2C1-201ENST00000328560 ASXL2Q76L83 1435 aa18.39■□□□□ 0.53
ATP2C1-201ENST00000328560 SLC24A1O60721 1099 aa18.38■□□□□ 0.53
ATP2C1-201ENST00000328560 NUTM2DQ5VT03 806 aaPredicted RBP18.38■□□□□ 0.53
ATP2C1-201ENST00000328560 UGGT1Q9NYU2 1555 aa18.37■□□□□ 0.53
ATP2C1-201ENST00000328560 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.37■□□□□ 0.53
ATP2C1-201ENST00000328560 CARD14Q9BXL6 1004 aa18.37■□□□□ 0.53
ATP2C1-201ENST00000328560 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
ATP2C1-201ENST00000328560 MADDQ8WXG6 1647 aa18.37■□□□□ 0.53
ATP2C1-201ENST00000328560 ZMYM4Q5VZL5 1548 aa18.37■□□□□ 0.53
ATP2C1-201ENST00000328560 ZFYVE16Q7Z3T8 1539 aa18.37■□□□□ 0.53
ATP2C1-201ENST00000328560 MS4A1P11836 297 aa18.36■□□□□ 0.53
ATP2C1-201ENST00000328560 TRPM2O94759 1503 aa18.36■□□□□ 0.53
ATP2C1-201ENST00000328560 PTPRTO14522 1441 aa18.36■□□□□ 0.53
ATP2C1-201ENST00000328560 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
ATP2C1-201ENST00000328560 CLTCL1P53675 1640 aa18.36■□□□□ 0.53
ATP2C1-201ENST00000328560 RGS3P49796 1198 aa18.35■□□□□ 0.53
ATP2C1-201ENST00000328560 ASXL1Q8IXJ9 1541 aa18.35■□□□□ 0.53
ATP2C1-201ENST00000328560 SLFN5Q08AF3 891 aa18.35■□□□□ 0.53
ATP2C1-201ENST00000328560 BCAR3O75815 825 aa18.34■□□□□ 0.53
ATP2C1-201ENST00000328560 ATP7AQ04656 1500 aa18.33■□□□□ 0.52
ATP2C1-201ENST00000328560 INSRP06213 1382 aa18.33■□□□□ 0.52
ATP2C1-201ENST00000328560 RNF17Q9BXT8 1623 aaKnown RBP18.32■□□□□ 0.52
ATP2C1-201ENST00000328560 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
ATP2C1-201ENST00000328560 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
ATP2C1-201ENST00000328560 MORC1Q86VD1 984 aa18.32■□□□□ 0.52
ATP2C1-201ENST00000328560 CANXP27824 592 aaKnown RBP18.31■□□□□ 0.52
ATP2C1-201ENST00000328560 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
ATP2C1-201ENST00000328560 ARAP3Q8WWN8 1544 aa18.31■□□□□ 0.52
ATP2C1-201ENST00000328560 ZNF521Q96K83 1311 aa18.3■□□□□ 0.52
ATP2C1-201ENST00000328560 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
ATP2C1-201ENST00000328560 CD109Q6YHK3 1445 aa18.3■□□□□ 0.52
ATP2C1-201ENST00000328560 SAFB2Q14151 953 aaKnown RBP eCLIP18.3■□□□□ 0.52
ATP2C1-201ENST00000328560 SPHKAPQ2M3C7 1700 aa18.29■□□□□ 0.52
ATP2C1-201ENST00000328560 SLC4A3P48751 1232 aa18.28■□□□□ 0.52
ATP2C1-201ENST00000328560 CENPQQ7L2Z9 268 aaPredicted RBP18.28■□□□□ 0.52
ATP2C1-201ENST00000328560 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
ATP2C1-201ENST00000328560 PIK3C2GO75747 1445 aa18.28■□□□□ 0.52
ATP2C1-201ENST00000328560 NOS1P29475 1434 aa18.28■□□□□ 0.52
ATP2C1-201ENST00000328560 FRAT1Q92837 279 aaPredicted RBP18.27■□□□□ 0.52
ATP2C1-201ENST00000328560 SYNMO15061 1565 aa18.26■□□□□ 0.51
ATP2C1-201ENST00000328560 NEFMP07197 916 aa18.26■□□□□ 0.51
ATP2C1-201ENST00000328560 E9PSI1 815 aa18.26■□□□□ 0.51
ATP2C1-201ENST00000328560 DAXXQ9UER7 740 aaPredicted RBP18.26■□□□□ 0.51
ATP2C1-201ENST00000328560 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
ATP2C1-201ENST00000328560 ZNF518AQ6AHZ1 1483 aa18.25■□□□□ 0.51
ATP2C1-201ENST00000328560 TET3O43151 1660 aa18.25■□□□□ 0.51
ATP2C1-201ENST00000328560 RAPGEF3O95398 923 aa18.25■□□□□ 0.51
ATP2C1-201ENST00000328560 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
ATP2C1-201ENST00000328560 CEP152O94986 1710 aa18.24■□□□□ 0.51
ATP2C1-201ENST00000328560 CFAP65Q6ZU64 1925 aaKnown RBP18.23■□□□□ 0.51
ATP2C1-201ENST00000328560 NPC1L1Q9UHC9 1359 aa18.23■□□□□ 0.51
ATP2C1-201ENST00000328560 NSD3Q9BZ95 1437 aa18.22■□□□□ 0.51
ATP2C1-201ENST00000328560 COG6Q9Y2V7 657 aa18.22■□□□□ 0.51
ATP2C1-201ENST00000328560 PANK1Q8TE04 598 aa18.22■□□□□ 0.51
ATP2C1-201ENST00000328560 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
ATP2C1-201ENST00000328560 STK26Q9P289 416 aa18.21■□□□□ 0.51
ATP2C1-201ENST00000328560 WWC1Q8IX03 1113 aa18.21■□□□□ 0.51
ATP2C1-201ENST00000328560 MTHFSP49914 203 aa18.2■□□□□ 0.5
ATP2C1-201ENST00000328560 TRMT2AQ8IZ69 625 aaKnown RBP18.2■□□□□ 0.5
ATP2C1-201ENST00000328560 NKTRP30414 1462 aaKnown RBP18.2■□□□□ 0.5
ATP2C1-201ENST00000328560 DDRGK1Q96HY6 314 aa18.19■□□□□ 0.5
ATP2C1-201ENST00000328560 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
ATP2C1-201ENST00000328560 KDM5AP29375 1690 aaKnown RBP18.19■□□□□ 0.5
ATP2C1-201ENST00000328560 FAM161AQ3B820 660 aa18.19■□□□□ 0.5
ATP2C1-201ENST00000328560 TCP11L2Q8N4U5 519 aa18.19■□□□□ 0.5
ATP2C1-201ENST00000328560 INO80Q9ULG1 1556 aaPredicted RBP18.19■□□□□ 0.5
ATP2C1-201ENST00000328560 CYB5RLQ6IPT4 315 aa18.18■□□□□ 0.5
ATP2C1-201ENST00000328560 C14orf93Q9H972 538 aaKnown RBP18.18■□□□□ 0.5
ATP2C1-201ENST00000328560 DEPDC5O75140 1603 aa18.18■□□□□ 0.5
ATP2C1-201ENST00000328560 ABCA6Q8N139 1617 aa18.18■□□□□ 0.5
ATP2C1-201ENST00000328560 MAP3K4Q9Y6R4 1608 aa18.17■□□□□ 0.5
ATP2C1-201ENST00000328560 CABP2Q9NPB3 220 aa18.17■□□□□ 0.5
ATP2C1-201ENST00000328560 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
ATP2C1-201ENST00000328560 VGFO15240 615 aaPredicted RBP18.16■□□□□ 0.5
ATP2C1-201ENST00000328560 IGHDP01880 384 aa18.16■□□□□ 0.5
ATP2C1-201ENST00000328560 MYOM1P52179 1685 aa18.16■□□□□ 0.5
ATP2C1-201ENST00000328560 U2AF1L5P0DN76 240 aaPredicted RBP18.16■□□□□ 0.5
ATP2C1-201ENST00000328560 U2AF1Q01081 240 aaKnown RBP eCLIP18.16■□□□□ 0.5
ATP2C1-201ENST00000328560 CLUAP1Q96AJ1 413 aa18.16■□□□□ 0.5
ATP2C1-201ENST00000328560 MYOM2P54296 1465 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms